Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 4.3e-50 201.1 104 100.0
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 7.9e-12 73.9 86 47.7
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 1.0e-11 73.6 75 49.3
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 2.3e-11 72.4 69 58.0
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 3.9e-11 71.6 77 48.1
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.5e-10 69.7 75 48.0
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 2.0e-10 69.3 74 48.6
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 4.3e-10 68.2 71 49.3
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 7.4e-10 67.4 76 46.1
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 9.7e-10 67.0 81 48.1
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 1.3e-09 66.6 70 51.4
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.7e-09 66.2 70 50.0
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 2.2e-09 65.9 74 47.3
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 2.2e-09 65.9 78 44.9
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.8e-09 65.5 72 45.8
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 3.7e-09 65.1 61 54.1
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 3.7e-09 65.1 78 46.2
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 3.7e-09 65.1 70 50.0
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 3.7e-09 65.1 84 44.0
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 3.7e-09 65.1 64 50.0
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 4.8e-09 64.7 78 43.6
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 4.8e-09 64.7 79 45.6
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 6.3e-09 64.3 74 47.3
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 6.3e-09 64.3 78 41.0
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 8.2e-09 63.9 79 45.6
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 1.1e-08 63.5 70 48.6
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.8e-08 62.8 66 51.5
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 2.4e-08 62.4 78 38.5
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 3.1e-08 62.0 73 49.3
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 5.3e-08 61.2 70 51.4
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 9.1e-08 60.5 74 43.2
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 1.2e-07 60.1 76 42.1
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 2.6e-07 58.9 79 44.3
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 3.4e-07 58.5 76 40.8
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 3.4e-07 58.5 78 34.6
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 4.5e-07 58.2 78 42.3
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 4.5e-07 58.2 78 43.6
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 5.9e-07 57.8 74 40.5
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 7.7e-07 57.4 58 53.4
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 7.7e-07 57.4 76 42.1
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 7.7e-07 57.4 64 50.0
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 1.0e-06 57.0 74 43.2
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 1.0e-06 57.0 74 43.2
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.3e-06 56.6 74 43.2
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 1.3e-06 56.6 78 35.9
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 1.3e-06 56.6 77 40.3
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 1.3e-06 56.6 68 50.0
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 1.3e-06 56.6 57 50.9
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 1.7e-06 56.2 57 54.4
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 1.7e-06 56.2 64 48.4
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 2.2e-06 55.8 78 37.2
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 2.2e-06 55.8 68 48.5
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 2.9e-06 55.5 72 41.7
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 2.9e-06 55.5 76 42.1
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 2.9e-06 55.5 81 37.0
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 2.9e-06 55.5 70 42.9
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 3.8e-06 55.1 78 39.7
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 3.8e-06 55.1 68 42.6
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 5.0e-06 54.7 76 36.8
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 5.0e-06 54.7 79 32.9
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 5.0e-06 54.7 77 39.0
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 5.0e-06 54.7 59 47.5
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 6.5e-06 54.3 88 35.2
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 8.5e-06 53.9 76 39.5


User provided reference genes

Program Settings