Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 1.0e-120 436.8 229 100.0
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 3.5e-105 385.2 228 89.0
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 6.0e-105 384.4 227 88.5
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 6.7e-104 380.9 230 86.5
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 1.5e-103 379.8 228 87.3
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 1.9e-103 379.4 222 88.3
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 1.9e-103 379.4 222 88.3
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 2.5e-103 379.0 229 87.8
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 4.3e-103 378.3 225 88.9
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 4.3e-103 378.3 226 87.6
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 5.6e-103 377.9 222 87.8
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 1.3e-102 376.7 232 86.6
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 2.1e-102 375.9 228 88.6
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 2.1e-102 375.9 227 88.1
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 2.1e-102 375.9 230 85.7
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 2.1e-102 375.9 226 87.6
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 2.8e-102 375.6 223 87.4
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 3.7e-102 375.2 218 86.7
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 6.2e-102 374.4 227 86.3
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 6.2e-102 374.4 227 86.3
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 1.4e-101 373.2 230 84.8
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.4e-101 373.2 225 86.2
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 1.8e-101 372.9 222 87.4
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 1.8e-101 372.9 227 85.5
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 1.8e-101 372.9 230 86.5
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 2.4e-101 372.5 221 88.2
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 3.1e-101 372.1 230 84.8
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 3.1e-101 372.1 223 86.5
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 3.1e-101 372.1 223 87.0
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 3.1e-101 372.1 223 86.5
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 3.1e-101 372.1 230 87.4
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 3.1e-101 372.1 227 87.2
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 3.1e-101 372.1 228 84.6
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 3.1e-101 372.1 222 87.4
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 3.1e-101 372.1 222 86.9
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 4.0e-101 371.7 222 86.5
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 4.0e-101 371.7 223 87.0
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 4.0e-101 371.7 227 86.3
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 5.3e-101 371.3 222 86.5
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 5.3e-101 371.3 222 86.5
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 6.9e-101 370.9 228 85.1
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 6.9e-101 370.9 226 85.8
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 6.9e-101 370.9 225 87.1
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 6.9e-101 370.9 227 87.2
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.0e-101 370.5 224 87.1
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 9.0e-101 370.5 224 86.2
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 1.2e-100 370.2 220 88.6
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 1.2e-100 370.2 229 86.5
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 1.2e-100 370.2 227 86.3
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 1.5e-100 369.8 223 86.5
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.5e-100 369.8 224 86.6
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 1.5e-100 369.8 223 86.5
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 2.0e-100 369.4 223 86.5
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 2.0e-100 369.4 228 86.0
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 2.0e-100 369.4 223 86.5
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 2.0e-100 369.4 228 85.1
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 2.0e-100 369.4 206 93.7
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 3.4e-100 368.6 222 86.0
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 3.4e-100 368.6 222 86.0
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 3.4e-100 368.6 222 86.0
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 3.4e-100 368.6 212 91.5
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 3.4e-100 368.6 222 86.9
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 4.5e-100 368.2 222 85.6
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.5e-100 368.2 229 85.2
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 4.5e-100 368.2 224 86.6
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 7.6e-100 367.5 230 84.8
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 1.0e-99 367.1 223 86.5
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 1.3e-99 366.7 222 85.1
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 1.3e-99 366.7 213 90.1
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.3e-99 366.7 226 86.3
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.7e-99 366.3 223 86.1
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.7e-99 366.3 223 86.1
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 1.7e-99 366.3 227 83.7
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 1.7e-99 366.3 226 86.3
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 2.2e-99 365.9 223 85.7
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 3.8e-99 365.2 228 82.9
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 3.8e-99 365.2 226 85.0
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 3.8e-99 365.2 229 82.5
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 3.8e-99 365.2 223 85.2
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 3.8e-99 365.2 224 86.6
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 1.1e-98 363.6 205 92.2
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 1.1e-98 363.6 228 83.8
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.4e-98 363.2 226 83.2
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 1.9e-98 362.8 228 84.6
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 1.9e-98 362.8 206 91.3
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 3.2e-98 362.1 227 84.1
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 4.2e-98 361.7 212 87.7
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.2e-98 361.7 230 83.5
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 5.5e-98 361.3 231 81.8
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 7.1e-98 360.9 230 83.0
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 9.3e-98 360.5 225 83.6
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 9.3e-98 360.5 230 82.6
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.6e-97 359.8 222 86.0
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 3.5e-97 358.6 228 85.5
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 4.6e-97 358.2 226 83.6
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 4.6e-97 358.2 203 91.6
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 6.0e-97 357.8 223 83.4
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.0e-96 357.1 219 84.9
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 1.8e-96 356.3 229 81.7
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 3.0e-96 355.5 251 77.3
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 3.0e-96 355.5 225 84.0
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 5.1e-96 354.8 229 81.7
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 6.7e-96 354.4 223 83.0
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 6.7e-96 354.4 218 83.9
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 2.5e-95 352.4 228 80.7
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 5.7e-95 351.3 229 80.3
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 7.4e-95 350.9 205 89.3
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.2e-94 349.4 221 80.5
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 1.4e-93 346.7 221 81.4
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 1.4e-93 346.7 232 77.6
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.7e-91 339.7 300 66.0
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 5.0e-91 338.2 221 80.1
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 9.7e-87 323.9 190 88.4
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 4.8e-86 321.6 229 76.9
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 1.1e-85 320.5 208 78.4
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 7.7e-84 314.3 214 74.3
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 1.9e-82 309.7 211 75.8
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 1.3e-78 297.0 192 85.9
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 4.1e-77 292.0 190 82.6
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 1.0e-75 287.3 215 71.2
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 4.2e-74 282.0 179 84.9
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 3.6e-73 278.9 194 79.4
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 3.6e-73 278.9 174 82.8
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 2.8e-70 269.2 156 90.4
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.7e-70 268.9 154 90.3
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.8e-69 266.5 180 78.3
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.8e-69 266.5 154 90.3
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 4.1e-69 265.4 157 87.9
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 5.3e-69 265.0 154 89.0
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.9e-68 261.5 179 77.1
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 2.1e-65 253.1 161 82.0
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 4.5e-60 235.3 158 77.2
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 7.0e-53 211.5 124 87.1
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.0e-51 207.6 161 71.4
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 4.3e-42 175.6 103 90.3
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 2.1e-41 173.3 98 90.8
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.8e-41 172.9 110 82.7
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.4e-32 144.1 154 53.9
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.4e-31 139.0 88 83.0
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 1.3e-27 127.5 72 86.1
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 6.2e-25 118.6 206 37.4
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 1.1e-21 107.8 56 96.4
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 7.8e-20 101.7 118 55.9
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 1.1e-16 91.3 63 74.6
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 4.0e-16 89.4 66 69.7
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 3.8e-14 82.8 62 69.4
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 3.3e-10 69.7 49 73.5


User provided reference genes

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