Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.2e-158 563.1 279 100.0
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.8e-128 462.2 250 91.2
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 3.1e-79 299.3 286 60.1
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.0e-77 294.3 278 60.1
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 5.0e-77 292.0 281 59.8
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 2.7e-75 286.2 284 58.8
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 4.6e-75 285.4 285 57.9
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 1.0e-74 284.3 283 56.9
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.4e-74 283.9 268 59.7
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.8e-74 283.5 284 58.8
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 2.0e-73 280.0 239 64.4
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.6e-73 279.6 284 57.7
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 2.6e-73 279.6 278 57.6
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.6e-73 279.6 272 59.2
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 7.4e-73 278.1 279 56.3
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 9.7e-73 277.7 281 56.6
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.2e-72 276.6 240 63.3
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 6.3e-72 275.0 285 56.8
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.4e-71 273.9 284 56.7
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 9.1e-71 271.2 280 57.5
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 9.1e-71 271.2 266 56.8
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.3e-69 267.3 287 53.7
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.7e-69 266.9 282 55.3
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 3.8e-69 265.8 281 54.4
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.9e-68 263.5 249 57.4
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 2.5e-68 263.1 269 56.9
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 4.2e-68 262.3 279 55.2
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 9.4e-68 261.2 264 57.2
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 6.1e-67 258.5 274 54.7
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 7.9e-67 258.1 272 53.7
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.8e-66 256.9 272 53.7
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-66 256.5 281 55.5
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 3.0e-66 256.1 283 53.4
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 3.9e-66 255.8 284 53.9
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.2e-66 255.4 281 55.2
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 6.7e-66 255.0 281 55.2
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 8.8e-66 254.6 282 55.0
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.5e-65 253.8 242 58.3
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.0e-65 253.4 278 54.3
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 4.4e-65 252.3 231 61.0
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 9.7e-65 251.1 277 54.2
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.7e-64 249.2 281 54.1
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 7.0e-63 245.0 280 51.4
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.6e-62 243.8 274 51.8
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 3.5e-62 242.7 295 49.8
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 4.5e-62 242.3 269 52.4
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.0e-61 241.1 268 54.1
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.7e-61 240.4 268 52.2
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.7e-61 240.4 268 52.6
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 2.2e-61 240.0 270 53.0
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 1.5e-60 237.3 253 54.9
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.5e-60 237.3 252 55.2
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 4.2e-60 235.7 228 58.8
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 4.2e-60 235.7 268 51.5
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 9.4e-60 234.6 344 44.8
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 1.6e-59 233.8 272 50.4
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 3.6e-59 232.6 265 52.1
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 3.6e-59 232.6 271 49.4
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.4e-58 230.7 279 50.5
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 3.0e-58 229.6 293 48.8
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.0e-58 229.6 269 51.3
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 4.0e-58 229.2 267 53.2
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 1.5e-57 227.3 227 55.9
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.6e-57 226.5 272 49.3
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 3.3e-57 226.1 269 51.3
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 7.5e-57 224.9 268 50.0
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 9.7e-57 224.6 279 49.8
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.3e-56 224.2 280 51.4
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 6.3e-56 221.9 259 55.2
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.4e-55 220.7 235 52.8
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 3.1e-55 219.5 279 48.7
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 7.0e-55 218.4 211 58.8
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 9.1e-55 218.0 263 49.0
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 9.1e-55 218.0 265 50.9
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 2.5e-52 209.9 245 51.4
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 3.2e-52 209.5 227 55.1
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 3.2e-52 209.5 230 54.8
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 7.2e-52 208.4 245 52.2
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 6.1e-51 205.3 268 47.0
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 8.0e-51 204.9 224 54.9
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 1.4e-50 204.1 268 47.0
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.4e-50 204.1 263 48.7
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 6.8e-50 201.8 266 48.1
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 6.8e-50 201.8 266 48.1
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.2e-49 201.1 263 45.6
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 5.7e-49 198.7 279 49.1
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 3.7e-48 196.1 265 46.0
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 1.1e-47 194.5 162 64.2
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.4e-47 194.1 247 46.2
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 2.4e-47 193.4 281 47.7
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 7.0e-47 191.8 272 47.4
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.2e-46 191.0 294 45.6
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.2e-46 191.0 294 45.6
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.2e-46 191.0 210 54.3
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 1.6e-46 190.7 271 45.4
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.6e-46 190.7 245 49.4
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 7.7e-46 188.3 278 46.0
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 7.7e-46 188.3 278 46.0
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 1.0e-45 188.0 370 40.3
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.3e-45 187.6 271 45.4
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 2.3e-45 186.8 279 48.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.1e-44 184.5 267 46.8
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 6.8e-42 175.3 270 46.3
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 7.5e-41 171.8 241 44.0
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-40 171.0 268 45.1
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 1.4e-39 167.5 269 45.0
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.8e-39 167.2 293 42.7
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 7.0e-39 165.2 120 69.2
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 9.2e-39 164.9 293 42.3
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 5.9e-38 162.2 169 51.5
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 5.0e-37 159.1 179 52.0
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 8.0e-35 151.8 89 85.4
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 5.9e-30 135.6 95 69.5
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.6e-27 127.5 238 41.6
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 3.6e-27 126.3 187 42.2
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 1.4e-26 124.4 159 48.4
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 8.3e-24 115.2 72 79.2
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 7.0e-23 112.1 73 78.1
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 6.0e-22 109.0 179 39.1
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.6e-19 100.9 219 37.0
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 2.8e-19 100.1 207 38.2
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.1e-18 98.2 72 66.7
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 3.1e-18 96.7 195 36.4
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 4.4e-17 92.8 58 79.3
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 2.9e-16 90.1 229 33.2
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.6e-14 84.3 56 78.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.3e-13 80.5 63 61.9
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 2.5e-12 77.0 118 43.2
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 3.1e-10 70.1 117 39.3
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 4.0e-10 69.7 70 50.0
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 2.1e-06 57.4 153 31.4


User provided reference genes

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