Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 8.3e-70 266.9 136 100.0
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 1.8e-48 196.1 141 73.0
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 9.0e-48 193.7 140 75.0
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 4.5e-47 191.4 143 69.9
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 7.6e-47 190.7 142 69.7
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 9.9e-47 190.3 142 69.7
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 9.9e-47 190.3 142 69.7
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.3e-46 189.9 142 69.7
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 3.8e-46 188.3 140 69.3
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.2e-45 184.9 143 72.7
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.2e-45 184.9 143 72.7
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 4.2e-45 184.9 140 72.1
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 1.6e-44 183.0 140 71.4
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 1.6e-44 183.0 140 71.4
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 4.6e-44 181.4 140 70.7
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.0e-43 180.3 135 66.7
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 5.1e-43 177.9 140 67.9
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 8.7e-43 177.2 139 67.6
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 1.5e-42 176.4 141 68.8
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 2.5e-42 175.6 134 67.9
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 2.5e-42 175.6 142 67.6
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 4.3e-42 174.9 138 69.6
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 9.6e-42 173.7 140 67.9
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 1.3e-41 173.3 139 66.9
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.3e-41 173.3 139 68.3
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 1.3e-41 173.3 139 68.3
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 1.3e-41 173.3 139 68.3
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 1.6e-41 172.9 142 67.6
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 2.1e-41 172.6 140 65.0
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 2.8e-41 172.2 140 67.1
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 4.8e-41 171.4 135 66.7
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 4.8e-41 171.4 145 65.5
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 8.1e-41 170.6 139 67.6
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 1.8e-40 169.5 143 64.3
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 5.3e-40 167.9 134 70.9
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 4.5e-39 164.9 143 62.9
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 1.7e-38 162.9 138 65.9
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 2.9e-38 162.2 143 62.2
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 1.4e-37 159.8 140 65.0
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 1.9e-37 159.5 141 61.7
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 2.4e-37 159.1 141 63.8
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 2.4e-37 159.1 140 62.1
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 2.4e-37 159.1 138 65.9
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 3.2e-37 158.7 141 61.0
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 7.1e-37 157.5 140 61.4
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 9.3e-37 157.1 139 61.2
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 9.3e-37 157.1 140 61.4
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 9.3e-37 157.1 141 61.7
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 1.2e-36 156.8 142 62.0
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 1.2e-36 156.8 142 64.8
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 1.2e-36 156.8 134 65.7
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 2.1e-36 156.0 137 63.5
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 2.1e-36 156.0 139 60.4
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 2.7e-36 155.6 141 61.0
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 3.5e-36 155.2 135 59.3
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 4.6e-36 154.8 144 62.5
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 4.6e-36 154.8 142 59.2
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 6.0e-36 154.5 144 60.4
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 1.3e-35 153.3 139 61.9
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 1.8e-35 152.9 136 61.0
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 3.9e-35 151.8 111 70.3
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 5.1e-35 151.4 139 63.3
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 5.1e-35 151.4 142 63.4
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 8.7e-35 150.6 140 62.9
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.1e-34 150.2 146 62.3
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 1.5e-34 149.8 139 60.4
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.5e-34 149.8 141 57.4
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.9e-34 149.4 138 63.0
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 3.3e-34 148.7 141 59.6
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 3.3e-34 148.7 139 58.3
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 4.3e-34 148.3 143 60.8
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 7.4e-34 147.5 140 62.9
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 9.6e-34 147.1 136 59.6
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 1.3e-33 146.7 139 57.6
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 2.1e-33 146.0 140 58.6
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 2.8e-33 145.6 133 57.9
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 8.2e-33 144.1 119 66.4
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.4e-32 143.3 132 59.1
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 3.1e-32 142.1 158 53.2
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 4.0e-32 141.7 139 58.3
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 4.0e-32 141.7 138 58.7
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 4.0e-32 141.7 135 58.5
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 5.3e-32 141.4 139 58.3
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 6.9e-32 141.0 140 58.6
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 6.9e-32 141.0 140 60.0
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 2.0e-31 139.4 135 57.8
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 2.0e-31 139.4 141 57.4
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 4.5e-31 138.3 141 57.4
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.0e-30 137.1 142 50.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 4.9e-30 134.8 141 56.7
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 6.5e-30 134.4 138 57.2
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 5.5e-29 131.3 112 64.3
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 6.0e-28 127.9 147 53.1
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 1.5e-26 123.2 99 67.7
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 1.1e-24 117.1 77 71.4
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 5.3e-24 114.8 114 55.3
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 3.4e-23 112.1 131 50.4
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 4.5e-23 111.7 141 48.9
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 5.0e-22 108.2 117 47.0
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 8.5e-22 107.5 126 42.1
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 3.2e-21 105.5 128 45.3
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 4.2e-21 105.1 70 74.3
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 9.4e-21 104.0 127 39.4
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 2.1e-20 102.8 113 54.9
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 6.1e-20 101.3 115 47.0
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 1.0e-19 100.5 99 58.6
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 6.7e-19 97.8 111 48.6
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 4.8e-17 91.7 140 42.1
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.3e-16 88.2 66 68.2
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 9.1e-16 87.4 119 43.7
Hma1.2p1_0935F.1_g238700 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 1.0e-14 84.0 42 95.2
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 1.4e-11 73.6 77 55.8
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 3.3e-10 68.9 85 47.1
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 7.4e-10 67.8 68 54.4
DCAR_031627 Daucus carota HOM05D006738 ORTHO05D008191 4.1e-08 62.0 76 48.7
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 2.0e-07 59.7 74 50.0
PRCOL_00001928 Prasinoderma coloniale HOM05D006738 ORTHO05D008191 2.6e-07 59.3 66 36.4
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 2.2e-06 56.2 78 44.9


User provided reference genes

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