Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 1.9e-119 432.6 223 100.0
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 1.6e-46 190.3 219 50.2
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 6.4e-43 178.3 210 48.6
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.9e-40 169.1 221 42.5
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 1.1e-39 167.5 222 45.9
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 9.6e-39 164.5 215 46.5
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 2.1e-38 163.3 219 40.6
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 8.1e-38 161.4 222 43.2
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.8e-37 160.2 213 45.1
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.4e-37 159.8 219 42.0
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 4.0e-37 159.1 221 43.0
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 5.2e-37 158.7 216 40.3
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 8.9e-37 157.9 230 44.8
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 1.5e-36 157.1 220 40.9
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 2.6e-36 156.4 249 40.6
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.7e-35 153.7 241 41.5
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.7e-35 153.7 225 41.8
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 2.2e-35 153.3 228 42.5
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.2e-35 153.3 223 39.5
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 2.2e-35 153.3 229 40.2
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 2.9e-35 152.9 217 42.4
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 6.4e-35 151.8 226 43.4
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 8.4e-35 151.4 225 41.3
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 4.2e-34 149.1 229 41.0
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 4.2e-34 149.1 219 39.3
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 4.2e-34 149.1 235 39.6
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 7.1e-34 148.3 223 39.0
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 9.3e-34 147.9 223 39.0
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 1.2e-33 147.5 216 39.8
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 1.2e-33 147.5 224 40.6
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 1.6e-33 147.1 114 61.4
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 2.7e-33 146.4 192 43.2
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 2.7e-33 146.4 220 41.4
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 6.0e-33 145.2 195 43.1
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 7.8e-33 144.8 145 52.4
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 8.7e-32 141.4 110 60.0
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 8.7e-32 141.4 212 41.0
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 1.1e-31 141.0 217 39.6
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 2.5e-31 139.8 213 40.4
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 3.3e-31 139.4 227 41.9
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 3.3e-31 139.4 219 40.2
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 9.6e-31 137.9 217 40.6
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 1.3e-30 137.5 115 54.8
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.6e-30 137.1 225 38.2
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.8e-30 136.3 225 38.2
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 3.6e-30 136.0 227 40.5
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 4.8e-30 135.6 226 38.9
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 4.8e-30 135.6 226 38.9
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 8.1e-30 134.8 214 38.3
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 8.1e-30 134.8 219 39.7
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 8.1e-30 134.8 219 39.3
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 1.1e-29 134.4 221 38.5
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-29 134.0 223 38.1
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 6.9e-29 131.7 216 37.0
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 3.4e-28 129.4 120 55.0
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 4.5e-28 129.0 218 36.7
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.5e-28 129.0 223 35.4
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 4.5e-28 129.0 219 37.0
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 5.8e-28 128.6 219 37.9
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.3e-27 127.5 140 45.0
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 1.3e-27 127.5 221 39.4
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 2.2e-27 126.7 219 39.3
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 2.2e-27 126.7 104 56.7
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 2.2e-27 126.7 230 38.3
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 2.2e-27 126.7 250 38.4
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 2.9e-27 126.3 216 40.3
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.9e-27 126.3 224 35.3
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 6.4e-27 125.2 219 37.9
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.4e-26 124.0 119 50.4
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 1.9e-26 123.6 213 40.4
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 2.4e-26 123.2 219 39.3
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.4e-26 123.2 209 37.8
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.4e-26 123.2 222 37.8
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 2.4e-26 123.2 219 37.4
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 5.4e-26 122.1 203 40.9
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.6e-25 120.6 242 38.4
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 1.6e-25 120.6 156 43.6
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 2.1e-25 120.2 143 48.3
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 2.7e-25 119.8 215 32.6
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 7.9e-25 118.2 219 36.1
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 1.3e-24 117.5 149 43.6
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 1.3e-24 117.5 216 37.5
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 2.3e-24 116.7 128 47.7
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 2.3e-24 116.7 107 57.0
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 5.1e-24 115.5 234 33.3
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 5.1e-24 115.5 149 46.3
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 5.1e-24 115.5 139 45.3
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 1.1e-23 114.4 133 43.6
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 1.1e-23 114.4 155 43.9
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 1.9e-23 113.6 115 50.4
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.9e-23 113.6 227 35.2
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 2.5e-23 113.2 116 50.0
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 2.5e-23 113.2 114 46.5
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 3.3e-23 112.8 215 39.1
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.3e-23 112.8 117 50.4
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 5.6e-23 112.1 218 35.8
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 5.6e-23 112.1 93 55.9
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 1.6e-22 110.5 213 34.7
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 2.1e-22 110.2 142 45.8
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 3.6e-22 109.4 213 34.3
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 4.8e-22 109.0 227 38.8
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 4.0e-21 105.9 208 35.6
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 1.5e-20 104.0 215 33.5
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 2.6e-20 103.2 214 37.4
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 2.6e-20 103.2 214 37.4
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 3.4e-20 102.8 94 53.2
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 3.4e-20 102.8 214 34.1
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 5.8e-20 102.1 242 33.5
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 5.8e-20 102.1 124 48.4
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 5.8e-20 102.1 137 42.3
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 2.2e-19 100.1 174 37.4
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 2.9e-19 99.8 197 35.0
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 2.9e-19 99.8 228 34.2
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 3.8e-19 99.4 226 34.1
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 4.2e-18 95.9 96 47.9
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 7.1e-18 95.1 160 34.4
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.2e-17 94.4 215 32.6
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 2.7e-17 93.2 134 40.3
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.0e-16 91.3 222 34.7
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 2.3e-16 90.1 218 32.1
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.9e-15 87.0 59 59.3
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 3.3e-15 86.3 156 35.9
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 2.8e-14 83.2 88 47.7
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 2.8e-14 83.2 219 31.5
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.1e-13 81.3 211 29.9
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 1.2e-12 77.8 96 49.0
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.0e-11 74.7 97 39.2
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 1.0e-11 74.7 56 58.9
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.4e-10 70.9 55 60.0
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.2e-09 67.8 149 30.2
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 1.3e-08 64.3 42 59.5
BcaB06g26464 Brassica carinata HOM05D001447 ORTHO05D005923 1.9e-07 60.5 96 44.8
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 1.6e-06 57.4 73 41.1


User provided reference genes

Program Settings