Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002033 Daucus carota HOM05D003679 ORTHO05D004265 4.8e-61 237.7 120 100.0
DCAR_003511 Daucus carota HOM05D003679 ORTHO05D004265 1.1e-20 103.6 134 46.3
Actinidia03530 Actinidia chinensis HOM05D003679 ORTHO05D004265 9.1e-20 100.5 134 44.8
Dinv22115 Davidia involucrata HOM05D003679 ORTHO05D004265 9.1e-20 100.5 133 45.1
Cfa008063 Carpinus fangiana HOM05D003679 ORTHO05D004265 1.2e-19 100.1 133 46.6
Haze_13962 Corylus avellana HOM05D003679 ORTHO05D004265 1.2e-19 100.1 133 46.6
MBI07_g03169_MAGBIO Magnolia biondii HOM05D003679 ORTHO05D004265 1.2e-19 100.1 136 43.4
Hma1.2p1_0016F.1_g010780 Hydrangea macrophylla HOM05D003679 ORTHO05D004265 1.6e-19 99.8 136 43.4
Rhsim02G0172900 Rhododendron simsii HOM05D003679 ORTHO05D004265 1.6e-19 99.8 134 43.3
Dinv37407 Davidia involucrata HOM05D003679 ORTHO05D004265 2.7e-19 99.0 133 44.4
Actinidia29376 Actinidia chinensis HOM05D003679 ORTHO05D004265 3.5e-19 98.6 134 44.8
CSS0010343 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 5.9e-19 97.8 134 44.8
CSS0038034 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 5.9e-19 97.8 134 44.8
Cpa.g.sc21.95 Carica papaya HOM05D003679 ORTHO05D004265 5.9e-19 97.8 133 42.9
Lalb_Chr19g0131861 Lupinus albus HOM05D003679 ORTHO05D004265 7.7e-19 97.4 133 43.6
BcaNung06593 Brassica carinata HOM05D003679 ORTHO05D004265 1.0e-18 97.1 99 51.5
Ca_19809_v3 Cicer arietinum L. HOM05D003679 ORTHO05D004265 1.0e-18 97.1 133 42.9
Lalb_Chr03g0033781 Lupinus albus HOM05D003679 ORTHO05D004265 1.0e-18 97.1 133 44.4
MELO3C022164.2 Cucumis melo HOM05D003679 ORTHO05D004265 1.7e-18 96.3 133 42.1
vmacro11031 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 2.2e-18 95.9 134 43.3
ClCG08G000780 Citrullus lanatus HOM05D003679 ORTHO05D004265 2.9e-18 95.5 133 44.4
MD10G1003500 Malus domestica HOM05D003679 ORTHO05D004265 2.9e-18 95.5 134 42.5
Prupe.8G006100 Prunus persica HOM05D003679 ORTHO05D004265 2.9e-18 95.5 134 42.5
TAR629G3435 Trochodendron aralioides HOM05D003679 ORTHO05D004265 2.9e-18 95.5 132 43.2
Eucgr.F04075 Eucalyptus grandis HOM05D003679 ORTHO05D004265 3.8e-18 95.1 134 41.8
CiPaw.03G013700 Carya illinoinensis HOM05D003679 ORTHO05D004265 6.5e-18 94.4 133 42.9
Cc10_g16340 Coffea canephora HOM05D003679 ORTHO05D004265 6.5e-18 94.4 130 43.1
PGR004G0725 Punica granatum HOM05D003679 ORTHO05D004265 8.5e-18 94.0 134 41.0
Sc23g0000050 Simmondsia chinensis HOM05D003679 ORTHO05D004265 8.5e-18 94.0 134 41.8
unitig_37.g13075 Utricularia gibba HOM05D003679 ORTHO05D004265 8.5e-18 94.0 132 42.4
FvH4_2g00710 Fragaria vesca HOM05D003679 ORTHO05D004265 1.1e-17 93.6 132 41.7
FAN24G0047 Fragaria x ananassa HOM05D003679 ORTHO05D004265 1.1e-17 93.6 132 41.7
Lj3g0002271 Lotus japonicus HOM05D003679 ORTHO05D004265 1.1e-17 93.6 133 42.1
MD05G1002800 Malus domestica HOM05D003679 ORTHO05D004265 1.1e-17 93.6 134 41.8
Thhalv10018097m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 1.5e-17 93.2 133 42.1
QL09p001735 Quercus lobata HOM05D003679 ORTHO05D004265 1.5e-17 93.2 133 43.6
Sed0026343 Sechium edule HOM05D003679 ORTHO05D004265 1.5e-17 93.2 133 40.6
CsaV3_5G039850 Cucumis sativus L. HOM05D003679 ORTHO05D004265 1.9e-17 92.8 133 41.4
Gohir.A05G275400 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.9e-17 92.8 133 41.4
Manes.02G207300 Manihot esculenta HOM05D003679 ORTHO05D004265 1.9e-17 92.8 134 40.3
Potri.013G098700 Populus trichocarpa HOM05D003679 ORTHO05D004265 1.9e-17 92.8 134 40.3
RcHm_v2.0_Chr6g0251091 Rosa chinensis HOM05D003679 ORTHO05D004265 1.9e-17 92.8 132 41.7
Sabra13G0083300 Salix brachista HOM05D003679 ORTHO05D004265 1.9e-17 92.8 134 40.3
Sabra13G0084600 Salix brachista HOM05D003679 ORTHO05D004265 1.9e-17 92.8 134 40.3
Nn1g04396 Nelumbo nucifera HOM05D003679 ORTHO05D004265 2.5e-17 92.4 136 41.9
Thecc.08G179800 Theobroma cacao HOM05D003679 ORTHO05D004265 2.5e-17 92.4 133 41.4
TWI18G1229 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 2.5e-17 92.4 134 41.8
BraA07t31333Z Brassica rapa HOM05D003679 ORTHO05D004265 3.2e-17 92.0 133 40.6
FAN20G2916 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.2e-17 92.0 132 40.9
FAN27G2038 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.2e-17 92.0 132 40.9
Gohir.D05G277500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 3.2e-17 92.0 133 41.4
Gorai.009G290500 Gossypium raimondii HOM05D003679 ORTHO05D004265 3.2e-17 92.0 133 41.4
HPP92_006341 Vanilla planifolia HOM05D003679 ORTHO05D004265 3.2e-17 92.0 133 39.8
Psat7g228040 Pisum sativum HOM05D003679 ORTHO05D004265 5.5e-17 91.3 133 40.6
SGA_v2.0_scaffold24G10654 Striga asiatica HOM05D003679 ORTHO05D004265 5.5e-17 91.3 132 40.2
GSVIVG01037227001 Vitis vinifera HOM05D003679 ORTHO05D004265 5.5e-17 91.3 134 40.3
arahy.Tifrunner.gnm1.ann1.59G37Z Arachis hypogaea HOM05D003679 ORTHO05D004265 7.2e-17 90.9 133 42.1
arahy.Tifrunner.gnm1.ann1.AU4LT2 Arachis hypogaea HOM05D003679 ORTHO05D004265 7.2e-17 90.9 133 42.1
COL.COLO4_25139 Corchorus olitorius HOM05D003679 ORTHO05D004265 7.2e-17 90.9 133 40.6
Lj7C418G9 Lonicera japonica HOM05D003679 ORTHO05D004265 7.2e-17 90.9 132 41.7
Aqoxy4G00374 Aquilegia oxysepala HOM05D003679 ORTHO05D004265 9.4e-17 90.5 133 41.4
MSTRG.25498 Avicennia marina HOM05D003679 ORTHO05D004265 9.4e-17 90.5 132 41.7
SGA_v2.0_scaffold118G32618 Striga asiatica HOM05D003679 ORTHO05D004265 9.4e-17 90.5 132 39.4
Ciclev10018760m.g Citrus clementina HOM05D003679 ORTHO05D004265 1.2e-16 90.1 134 38.8
Duzib177G0004 Durio zibethinus HOM05D003679 ORTHO05D004265 1.2e-16 90.1 133 41.4
Gohir.D08G251000 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.2e-16 90.1 131 42.0
Gorai.004G267700 Gossypium raimondii HOM05D003679 ORTHO05D004265 1.2e-16 90.1 131 42.0
TPR.G34140 Trifolium pratense HOM05D003679 ORTHO05D004265 1.2e-16 90.1 133 41.4
Atru.chr13.2527 Acer truncatum HOM05D003679 ORTHO05D004265 1.6e-16 89.7 134 40.3
Aa31LG4G9170 Aethionema arabicum HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 39.1
A02p17340 Brassica napus HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 39.8
BraA02t06781Z Brassica rapa HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 39.8
Duzib248G0388 Durio zibethinus HOM05D003679 ORTHO05D004265 1.6e-16 89.7 100 50.0
Medtr4g030910 Medicago truncatula HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 41.4
Sp1g20350 Schrenkiella parvula HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 39.8
Sp5g26570 Schrenkiella parvula HOM05D003679 ORTHO05D004265 1.6e-16 89.7 133 39.8
AT1G22870 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 2.1e-16 89.4 133 39.8
A07p37690 Brassica napus HOM05D003679 ORTHO05D004265 2.1e-16 89.4 133 39.8
Cc02_g28270 Coffea canephora HOM05D003679 ORTHO05D004265 2.1e-16 89.4 131 44.3
AL2G31070 Arabidopsis lyrata HOM05D003679 ORTHO05D004265 2.7e-16 89.0 133 39.8
BcaC03g15292 Brassica carinata HOM05D003679 ORTHO05D004265 2.7e-16 89.0 133 39.8
C02p28990 Brassica napus HOM05D003679 ORTHO05D004265 2.7e-16 89.0 133 39.8
BolC2t08949H Brassica oleracea HOM05D003679 ORTHO05D004265 2.7e-16 89.0 133 39.8
Carub.0002s1826 Capsella rubella HOM05D003679 ORTHO05D004265 2.7e-16 89.0 133 39.8
CAN.G43.11 Capsicum annuum HOM05D003679 ORTHO05D004265 2.7e-16 89.0 130 40.8
CDE02G0262 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 3.6e-16 88.6 134 38.8
CDE09G1378 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 3.6e-16 88.6 134 38.8
AUR62038539 Chenopodium quinoa HOM05D003679 ORTHO05D004265 3.6e-16 88.6 106 45.3
ECA247G4018 Erigeron canadensis HOM05D003679 ORTHO05D004265 3.6e-16 88.6 135 38.5
FAN06G3180 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.6e-16 88.6 132 40.2
FAN06G3813 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.6e-16 88.6 132 40.2
Gohir.D05G251500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 3.6e-16 88.6 133 41.4
Gorai.009G262900 Gossypium raimondii HOM05D003679 ORTHO05D004265 3.6e-16 88.6 133 41.4
HanXRQChr10g0298581 Helianthus annuus HOM05D003679 ORTHO05D004265 3.6e-16 88.6 135 39.3
Nitab4.5_0001430g0030 Nicotiana tabacum HOM05D003679 ORTHO05D004265 3.6e-16 88.6 130 40.8
THA.LOC104800081 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 3.6e-16 88.6 133 38.3
Lsat_1_v5_gn_1_1441 Lactuca sativa HOM05D003679 ORTHO05D004265 4.7e-16 88.2 135 39.3
Gohir.A08G230600 Gossypium hirsutum HOM05D003679 ORTHO05D004265 6.1e-16 87.8 131 41.2
Oeu028634.1 Olea europaea HOM05D003679 ORTHO05D004265 6.1e-16 87.8 132 40.2
AT1G71410 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 8.0e-16 87.4 133 39.1
BcaB07g32282 Brassica carinata HOM05D003679 ORTHO05D004265 8.0e-16 87.4 133 39.1
Carub.0001s2237 Capsella rubella HOM05D003679 ORTHO05D004265 8.0e-16 87.4 133 39.1
Nitab4.5_0000213g0040 Nicotiana tabacum HOM05D003679 ORTHO05D004265 8.0e-16 87.4 130 40.8
Peaxi162Scf00078g00824 Petunia axillaris HOM05D003679 ORTHO05D004265 8.0e-16 87.4 130 40.0
SalBow7G3862 Salvia bowleyana HOM05D003679 ORTHO05D004265 8.0e-16 87.4 132 40.2
TWI12G0838 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 8.0e-16 87.4 136 38.2
Solyc11g042990.2 Solanum lycopersicum HOM05D003679 ORTHO05D004265 1.0e-15 87.0 130 40.0
Sopen11g019340 Solanum pennellii HOM05D003679 ORTHO05D004265 1.0e-15 87.0 130 40.0
THA.LOC104809755 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 1.0e-15 87.0 133 39.1
Gohir.A05G249800 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.8e-15 86.3 133 39.8
PSO063G5029 Papaver somniferum HOM05D003679 ORTHO05D004265 1.8e-15 86.3 133 39.1
PSO782G1226 Papaver somniferum HOM05D003679 ORTHO05D004265 1.8e-15 86.3 133 39.1
C06p45570 Brassica napus HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 39.1
BolC6t39608H Brassica oleracea HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 39.1
CARHR023220 Cardamine hirsuta HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 39.1
Thhalv10006737m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 39.1
Glyma.09G002400 Glycine max HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 40.6
Glyma.12G241900 Glycine max HOM05D003679 ORTHO05D004265 2.3e-15 85.9 133 40.6
BcaB05g24669 Brassica carinata HOM05D003679 ORTHO05D004265 4.0e-15 85.1 133 37.6
CARHR291300 Cardamine hirsuta HOM05D003679 ORTHO05D004265 4.0e-15 85.1 133 39.1
Nn1g09907 Nelumbo nucifera HOM05D003679 ORTHO05D004265 4.0e-15 85.1 132 37.9
Zm00001eb162090 Zea mays HOM05D003679 ORTHO05D004265 4.0e-15 85.1 133 38.3
MSTRG.1602 Avicennia marina HOM05D003679 ORTHO05D004265 5.2e-15 84.7 129 39.5
Phvul.011G216200 Phaseolus vulgaris HOM05D003679 ORTHO05D004265 5.2e-15 84.7 133 39.8
Aa31LG7G6860 Aethionema arabicum HOM05D003679 ORTHO05D004265 6.8e-15 84.3 133 38.3
Oeu028929.2 Olea europaea HOM05D003679 ORTHO05D004265 6.8e-15 84.3 132 39.4
SMO361G0595 Selaginella moellendorffii HOM05D003679 ORTHO05D004265 6.8e-15 84.3 133 36.8
BcaC05g26193 Brassica carinata HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 38.3
A09p41890 Brassica napus HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 38.3
C05p21960 Brassica napus HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 38.3
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 38.3
BraA09t39677Z Brassica rapa HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 38.3
Migut.C01386 Erythranthe guttata HOM05D003679 ORTHO05D004265 8.8e-15 84.0 132 37.9
Zm00001eb358200 Zea mays HOM05D003679 ORTHO05D004265 8.8e-15 84.0 133 37.6
SHI16836 Sapria himalayana HOM05D003679 ORTHO05D004265 1.2e-14 83.6 132 38.6
Lj9C697G2 Lonicera japonica HOM05D003679 ORTHO05D004265 1.5e-14 83.2 134 36.6
VMungo1127G1022 Vigna mungo HOM05D003679 ORTHO05D004265 2.6e-14 82.4 133 39.8
Ah.05g170420 Amaranthus hybridus HOM05D003679 ORTHO05D004265 4.4e-14 81.6 135 37.0
ATR0602G033 Amborella trichopoda HOM05D003679 ORTHO05D004265 5.7e-14 81.3 133 36.8
EL10Ac1g01279 Beta vulgaris HOM05D003679 ORTHO05D004265 7.5e-14 80.9 133 36.1
SEGI_13301 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 9.8e-14 80.5 134 35.8
Hund03114 Selenicereus undatus HOM05D003679 ORTHO05D004265 1.3e-13 80.1 140 35.7
Pp3c9_3750 Physcomitrium patens HOM05D003679 ORTHO05D004265 3.7e-13 78.6 133 34.6
AUR62013388 Chenopodium quinoa HOM05D003679 ORTHO05D004265 4.8e-13 78.2 132 36.4
Mapoly0061s0106 Marchantia polymorpha HOM05D003679 ORTHO05D004265 1.1e-12 77.0 133 33.8
Duzib235G1025 Durio zibethinus HOM05D003679 ORTHO05D004265 4.5e-11 71.6 52 67.3
CAN.G252.4 Capsicum annuum HOM05D003679 ORTHO05D004265 5.0e-10 68.2 77 50.6
CBR_g22378 Chara braunii HOM05D003679 ORTHO05D004265 4.7e-08 61.6 134 29.1
DCAR_013262 Daucus carota HOM05D000141 ORTHO05D000780 8.0e-08 60.8 59 57.6
Hund23012 Selenicereus undatus HOM05D000141 ORTHO05D000780 1.8e-07 59.7 59 59.3
PRCOL_00006428 Prasinoderma coloniale HOM05D003679 ORTHO05D004265 3.0e-07 58.9 69 43.5
SGA_v2.0_scaffold7G03524 Striga asiatica HOM05D000141 ORTHO05D000780 3.0e-07 58.9 38 73.7
vmacro09618 Vaccinium macrocarpon HOM05D000141 ORTHO05D000780 3.0e-07 58.9 59 57.6
CSS0006265 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 4.0e-07 58.5 38 73.7
CSS0049127 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 4.0e-07 58.5 38 73.7
PSO541G2180 Papaver somniferum HOM05D000141 ORTHO05D000780 5.2e-07 58.2 115 37.4
TAR629G0856 Trochodendron aralioides HOM05D000053 ORTHO05D000035 6.8e-07 57.8 42 69.0
Oeu002616.1 Olea europaea HOM05D000141 ORTHO05D000780 8.9e-07 57.4 59 55.9
Nn1g07583 Nelumbo nucifera HOM05D000141 ORTHO05D000780 1.2e-06 57.0 59 52.5
Ah.08g214180 Amaranthus hybridus HOM05D000141 ORTHO05D000780 1.5e-06 56.6 59 52.5
Oeu019698.3 Olea europaea HOM05D000141 ORTHO05D000780 1.5e-06 56.6 38 71.1
PSO675G8224 Papaver somniferum HOM05D000141 ORTHO05D000780 1.5e-06 56.6 115 35.7
Rhsim04G0010000 Rhododendron simsii HOM05D000141 ORTHO05D000780 1.5e-06 56.6 38 71.1
MBI14_g02350_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D000780 2.0e-06 56.2 38 71.1
SalBow8G5192 Salvia bowleyana HOM05D000141 ORTHO05D000780 2.0e-06 56.2 38 71.1
TAR029G0001 Trochodendron aralioides HOM05D000141 ORTHO05D000780 2.0e-06 56.2 59 52.5
TAR627G0677 Trochodendron aralioides HOM05D000141 ORTHO05D000780 2.0e-06 56.2 59 52.5
GSVIVG01014752001 Vitis vinifera HOM05D000141 ORTHO05D000780 2.6e-06 55.8 59 52.5
Migut.M01620 Erythranthe guttata HOM05D000141 ORTHO05D000780 3.4e-06 55.5 38 71.1
AUR62017159 Chenopodium quinoa HOM05D000141 ORTHO05D000780 5.7e-06 54.7 59 50.8
AUR62035645 Chenopodium quinoa HOM05D000141 ORTHO05D000780 5.7e-06 54.7 59 50.8
Gohir.A01G094400 Gossypium hirsutum HOM05D000141 ORTHO05D000780 5.7e-06 54.7 59 54.2
TAR629G0235 Trochodendron aralioides HOM05D000141 ORTHO05D000780 5.7e-06 54.7 59 52.5
Actinidia03656 Actinidia chinensis HOM05D000141 ORTHO05D000780 7.5e-06 54.3 38 71.1
Cfa021900 Carpinus fangiana HOM05D000141 ORTHO05D000780 7.5e-06 54.3 98 37.8
Ciclev10007289m.g Citrus clementina HOM05D000141 ORTHO05D000780 7.5e-06 54.3 59 52.5
Eucgr.F03668 Eucalyptus grandis HOM05D000141 ORTHO05D000780 7.5e-06 54.3 38 65.8
Haze_09875 Corylus avellana HOM05D000141 ORTHO05D000780 9.8e-06 53.9 98 37.8
Gohir.D01G078900 Gossypium hirsutum HOM05D000141 ORTHO05D000780 9.8e-06 53.9 59 54.2
Gorai.002G103500 Gossypium raimondii HOM05D000141 ORTHO05D000780 9.8e-06 53.9 59 54.2
Manes.01G004466 Manihot esculenta HOM05D000141 ORTHO05D000780 9.8e-06 53.9 59 50.8


User provided reference genes

Program Settings