Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001942 Daucus carota HOM05D003060 ORTHO05D001716 0.0e+00 1555.0 830 100.0
DCAR_022153 Daucus carota HOM05D003060 ORTHO05D001716 1.1e-116 425.2 860 37.7
DCAR_003342 Daucus carota HOM05D003060 ORTHO05D001716 9.5e-116 422.2 845 39.3
QL03p012691 Quercus lobata HOM05D003060 ORTHO05D001716 5.2e-114 416.4 867 39.0
Duzib211G0658 Durio zibethinus HOM05D003060 ORTHO05D001716 2.5e-100 370.9 844 37.3
Thecc.08G198500 Theobroma cacao HOM05D003060 ORTHO05D001716 5.6e-100 369.8 830 36.4
Cfa006614 Carpinus fangiana HOM05D003060 ORTHO05D001716 1.4e-98 365.2 835 37.5
Manes.09G169200 Manihot esculenta HOM05D003060 ORTHO05D001716 5.2e-98 363.2 845 36.2
Actinidia19785 Actinidia chinensis HOM05D003060 ORTHO05D001716 6.8e-98 362.8 842 37.4
Haze_04161 Corylus avellana HOM05D003060 ORTHO05D001716 1.2e-97 362.1 843 35.7
Glyma.20G235700 Glycine max HOM05D003060 ORTHO05D001716 3.4e-97 360.5 827 36.4
Duzib116G0105 Durio zibethinus HOM05D003060 ORTHO05D001716 9.8e-97 359.0 835 36.2
Sabra05G0032100 Salix brachista HOM05D003060 ORTHO05D001716 6.4e-96 356.3 905 34.9
CiPaw.08G163000 Carya illinoinensis HOM05D003060 ORTHO05D001716 1.1e-95 355.5 833 36.6
Potri.005G026800 Populus trichocarpa HOM05D003060 ORTHO05D001716 1.4e-95 355.1 891 34.8
Glyma.10G152700 Glycine max HOM05D003060 ORTHO05D001716 3.2e-95 354.0 833 36.9
TAR633G1311 Trochodendron aralioides HOM05D003060 ORTHO05D001716 9.2e-95 352.4 862 35.3
Potri.013G018700 Populus trichocarpa HOM05D003060 ORTHO05D001716 1.5e-92 345.1 849 35.9
COL.COLO4_05531 Corchorus olitorius HOM05D003060 ORTHO05D001716 1.9e-92 344.7 843 35.3
Gorai.009G287300 Gossypium raimondii HOM05D003060 ORTHO05D001716 1.9e-92 344.7 832 35.5
CANSAT54G0820 Cannabis sativa HOM05D003060 ORTHO05D001716 4.3e-92 343.6 854 36.8
Atru.chr2.14 Acer truncatum HOM05D003060 ORTHO05D001716 7.3e-92 342.8 829 35.9
Gohir.D05G274200 Gossypium hirsutum HOM05D003060 ORTHO05D001716 6.2e-91 339.7 828 34.5
Lj1g0012568 Lotus japonicus HOM05D003060 ORTHO05D001716 6.2e-91 339.7 860 35.7
FAN09G4310 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.4e-89 334.0 862 35.2
Phvul.006G090511 Phaseolus vulgaris HOM05D003060 ORTHO05D001716 4.4e-89 333.6 845 35.5
TAR362G0619 Trochodendron aralioides HOM05D003060 ORTHO05D001716 2.9e-88 330.9 865 33.8
Duzib177G0733 Durio zibethinus HOM05D003060 ORTHO05D001716 6.4e-88 329.7 850 35.3
Ciclev10000070m.g Citrus clementina HOM05D003060 ORTHO05D001716 1.1e-87 328.9 841 36.4
Phvul.006G090600 Phaseolus vulgaris HOM05D003060 ORTHO05D001716 1.4e-87 328.6 865 34.2
FvH4_6g06310 Fragaria vesca HOM05D003060 ORTHO05D001716 3.2e-87 327.4 864 35.4
arahy.Tifrunner.gnm1.ann1.U2HTAJ Arachis hypogaea HOM05D003060 ORTHO05D001716 7.1e-87 326.2 844 35.3
Glyma.19G234300 Glycine max HOM05D003060 ORTHO05D001716 9.2e-87 325.9 848 35.7
FAN05G5493 Fragaria x ananassa HOM05D003060 ORTHO05D001716 1.6e-86 325.1 871 34.8
TWI36G0905 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 2.1e-86 324.7 844 35.3
FAN02G1847 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.5e-86 323.9 872 34.6
Actinidia24646 Actinidia chinensis HOM05D003060 ORTHO05D001716 6.0e-86 323.2 841 34.5
FAN14G2973 Fragaria x ananassa HOM05D003060 ORTHO05D001716 1.0e-85 322.4 864 35.2
Hma1.2p1_1212F.1_g267400 Hydrangea macrophylla HOM05D003060 ORTHO05D001716 3.0e-85 320.9 846 35.6
arahy.Tifrunner.gnm1.ann1.LGT5H6 Arachis hypogaea HOM05D003060 ORTHO05D001716 5.1e-85 320.1 844 34.8
Lalb_Chr18g0045701 Lupinus albus HOM05D003060 ORTHO05D001716 5.1e-85 320.1 821 34.7
Eucgr.H04503 Eucalyptus grandis HOM05D003060 ORTHO05D001716 6.6e-85 319.7 853 35.5
TWI56G0319 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 6.6e-85 319.7 841 35.3
TPR.G33216 Trifolium pratense HOM05D003060 ORTHO05D001716 2.5e-84 317.8 864 33.9
VMungo0540G0889 Vigna mungo HOM05D003060 ORTHO05D001716 2.1e-83 314.7 865 34.5
TAR636G0574 Trochodendron aralioides HOM05D003060 ORTHO05D001716 8.1e-83 312.8 886 33.5
Prupe.6G322700 Prunus persica HOM05D003060 ORTHO05D001716 1.4e-82 312.0 861 34.0
Nn3g21411 Nelumbo nucifera HOM05D003060 ORTHO05D001716 2.4e-82 311.2 873 33.1
VMungo0540G1887 Vigna mungo HOM05D003060 ORTHO05D001716 6.8e-82 309.7 845 35.5
Psat0s545g0040 Pisum sativum HOM05D003060 ORTHO05D001716 4.4e-81 307.0 865 33.2
Ca_05807_v3 Cicer arietinum L. HOM05D003060 ORTHO05D001716 5.8e-81 306.6 848 33.5
Lalb_Chr15g0077301 Lupinus albus HOM05D003060 ORTHO05D001716 5.8e-81 306.6 841 33.5
Cpa.g.sc48.79 Carica papaya HOM05D003060 ORTHO05D001716 6.4e-80 303.1 870 33.7
Sed0012843 Sechium edule HOM05D003060 ORTHO05D001716 8.4e-80 302.8 856 34.2
MD12G1216400 Malus domestica HOM05D003060 ORTHO05D001716 1.1e-79 302.4 870 33.8
RcHm_v2.0_Chr3g0455351 Rosa chinensis HOM05D003060 ORTHO05D001716 1.9e-79 301.6 875 33.4
CsaV3_2G006550 Cucumis sativus L. HOM05D003060 ORTHO05D001716 3.2e-79 300.8 865 32.9
Medtr7g113180 Medicago truncatula HOM05D003060 ORTHO05D001716 5.4e-79 300.1 866 33.1
TWI12G1080 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 3.5e-78 297.4 872 33.8
Lj5g0001145 Lotus japonicus HOM05D003060 ORTHO05D001716 4.6e-78 297.0 847 34.4
Sabra13G0021300 Salix brachista HOM05D003060 ORTHO05D001716 1.3e-77 295.4 859 33.5
MELO3C004230.2 Cucumis melo HOM05D003060 ORTHO05D001716 4.3e-76 290.4 878 32.3
Gohir.A05G272000 Gossypium hirsutum HOM05D003060 ORTHO05D001716 9.6e-76 289.3 748 35.2
Lj9C129G1 Lonicera japonica HOM05D003060 ORTHO05D001716 2.1e-75 288.1 861 32.4
Lj9A123G17 Lonicera japonica HOM05D003060 ORTHO05D001716 2.8e-75 287.7 822 33.8
Nitab4.5_0002344g0090 Nicotiana tabacum HOM05D003060 ORTHO05D001716 4.8e-75 287.0 826 30.8
Cc00_g10500 Coffea canephora HOM05D003060 ORTHO05D001716 9.9e-73 279.3 822 32.4
Nitab4.5_0004754g0020 Nicotiana tabacum HOM05D003060 ORTHO05D001716 1.3e-72 278.9 828 31.5
PGR031G3073 Punica granatum HOM05D003060 ORTHO05D001716 3.5e-70 270.8 832 32.5
Actinidia19783 Actinidia chinensis HOM05D003060 ORTHO05D001716 2.3e-69 268.1 718 33.7
vmacro04969 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 3.0e-69 267.7 875 31.0
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 1.9e-68 265.0 831 31.4
Dinv40310 Davidia involucrata HOM05D003060 ORTHO05D001716 5.6e-68 263.5 518 38.2
Rhsim07G0186300 Rhododendron simsii HOM05D003060 ORTHO05D001716 5.6e-68 263.5 862 31.3
ClCG02G015530 Citrullus lanatus HOM05D003060 ORTHO05D001716 9.0e-66 256.1 862 30.0
PGSC0003DMG402024702 Solanum tuberosum HOM05D003060 ORTHO05D001716 1.7e-64 251.9 512 36.9
Oeu010912.1 Olea europaea HOM05D003060 ORTHO05D001716 1.1e-63 249.2 818 30.8
THA.LOC104802799 Tarenaya hassleriana HOM05D003060 ORTHO05D001716 4.2e-63 247.3 846 30.9
HanXRQChr11g0339461 Helianthus annuus HOM05D003060 ORTHO05D001716 5.5e-63 246.9 866 31.9
ECA132G0003 Erigeron canadensis HOM05D003060 ORTHO05D001716 7.1e-63 246.5 857 31.2
MBI19_g13125_MAGBIO Magnolia biondii HOM05D003060 ORTHO05D001716 2.5e-60 238.0 855 31.2
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 9.6e-60 236.1 834 31.7
Sopen01g042920 Solanum pennellii HOM05D003060 ORTHO05D001716 1.3e-59 235.7 821 30.2
CDE02G1047 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 1.6e-59 235.3 852 30.9
AT5G27650 Arabidopsis thaliana HOM05D003060 ORTHO05D001716 3.7e-59 234.2 849 29.4
Oeu012112.1 Olea europaea HOM05D003060 ORTHO05D001716 6.2e-59 233.4 693 31.7
MSTRG.20426 Avicennia marina HOM05D003060 ORTHO05D001716 4.0e-58 230.7 735 31.2
Sed0010373 Sechium edule HOM05D003060 ORTHO05D001716 1.5e-57 228.8 851 30.3
CDE08G1209 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 2.0e-57 228.4 857 29.8
Solyc01g099360.3 Solanum lycopersicum HOM05D003060 ORTHO05D001716 2.9e-56 224.6 822 29.3
Ah.06g189640 Amaranthus hybridus HOM05D003060 ORTHO05D001716 1.9e-55 221.9 860 28.8
MSTRG.27986 Avicennia marina HOM05D003060 ORTHO05D001716 2.1e-54 218.4 846 28.5
Rhsim05G0141600 Rhododendron simsii HOM05D003060 ORTHO05D001716 3.5e-54 217.6 857 29.1
PSO063G5863 Papaver somniferum HOM05D003060 ORTHO05D001716 6.0e-54 216.9 872 29.1
SalBow3G3371 Salvia bowleyana HOM05D003060 ORTHO05D001716 6.0e-54 216.9 558 30.3
Thhalv10003560m.g Eutrema salsugineum HOM05D003060 ORTHO05D001716 1.0e-53 216.1 842 30.9
vmacro19622 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 1.5e-52 212.2 868 28.8
GSVIVG01031118001 Vitis vinifera HOM05D003060 ORTHO05D001716 4.3e-52 210.7 815 28.3
Medtr1g083170 Medicago truncatula HOM05D003060 ORTHO05D001716 7.4e-52 209.9 454 35.9
PSO782G3442 Papaver somniferum HOM05D003060 ORTHO05D001716 1.1e-50 206.1 861 29.2
AL6G39380 Arabidopsis lyrata HOM05D003060 ORTHO05D001716 2.0e-49 201.8 842 28.3
EL10Ac4g09376 Beta vulgaris HOM05D003060 ORTHO05D001716 2.0e-49 201.8 819 29.2
BcaB04g19679 Brassica carinata HOM05D003060 ORTHO05D001716 4.5e-49 200.7 821 29.8
Sp2g20810 Schrenkiella parvula HOM05D003060 ORTHO05D001716 4.5e-49 200.7 837 28.4
Migut.N01988 Erythranthe guttata HOM05D003060 ORTHO05D001716 2.2e-48 198.4 847 26.4
SHI18113 Sapria himalayana HOM05D003060 ORTHO05D001716 8.4e-48 196.4 525 32.6
Aa31LG11G9390 Aethionema arabicum HOM05D003060 ORTHO05D001716 2.5e-47 194.9 665 30.8
AUR62000787 Chenopodium quinoa HOM05D003060 ORTHO05D001716 2.5e-47 194.9 651 31.0
Sc09g0003030 Simmondsia chinensis HOM05D003060 ORTHO05D001716 1.6e-46 192.2 833 29.5
Carub.0006s2494 Capsella rubella HOM05D003060 ORTHO05D001716 2.7e-46 191.4 836 27.3
AUR62005180 Chenopodium quinoa HOM05D003060 ORTHO05D001716 4.6e-46 190.7 646 30.3
A09p05370 Brassica napus HOM05D003060 ORTHO05D001716 7.9e-46 189.9 718 27.9
Hund21701 Selenicereus undatus HOM05D003060 ORTHO05D001716 7.9e-46 189.9 854 28.2
BraA09t36175Z Brassica rapa HOM05D003060 ORTHO05D001716 1.8e-45 188.7 717 27.9
AL3G15990 Arabidopsis lyrata HOM05D003060 ORTHO05D001716 3.9e-45 187.6 826 29.3
CARHR186170 Cardamine hirsuta HOM05D003060 ORTHO05D001716 8.2e-43 179.9 837 27.7
SalBow7G2475 Salvia bowleyana HOM05D003060 ORTHO05D001716 1.1e-42 179.5 398 34.2
Carub.0003s0471 Capsella rubella HOM05D003060 ORTHO05D001716 2.4e-42 178.3 653 30.9
C09p05850 Brassica napus HOM05D003060 ORTHO05D001716 5.3e-42 177.2 734 27.9
BolC9t53512H Brassica oleracea HOM05D003060 ORTHO05D001716 5.3e-42 177.2 734 27.9
Thhalv10019994m.g Eutrema salsugineum HOM05D003060 ORTHO05D001716 7.7e-41 173.3 829 27.9
Haze_01221 Corylus avellana HOM05D003060 ORTHO05D001716 1.0e-40 172.9 614 32.6
AT3G05430 Arabidopsis thaliana HOM05D003060 ORTHO05D001716 1.3e-40 172.6 836 28.6
CARHR079770 Cardamine hirsuta HOM05D003060 ORTHO05D001716 9.4e-39 166.4 577 32.4
HanXRQChr14g0433331 Helianthus annuus HOM05D003060 ORTHO05D001716 9.4e-39 166.4 909 27.1
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 1.4e-37 162.5 506 28.9
QL06p008666 Quercus lobata HOM05D003060 ORTHO05D001716 1.8e-37 162.2 575 31.0
SGA_v2.0_scaffold80G25802 Striga asiatica HOM05D003060 ORTHO05D001716 2.3e-37 161.8 579 29.2
ATR0706G064 Amborella trichopoda HOM05D003060 ORTHO05D001716 5.1e-37 160.6 874 28.4
Lsat_1_v5_gn_9_87441 Lactuca sativa HOM05D003060 ORTHO05D001716 1.5e-36 159.1 864 26.9
Dinv44390 Davidia involucrata HOM05D003060 ORTHO05D001716 4.8e-35 154.1 407 32.4
Dinv30789 Davidia involucrata HOM05D003060 ORTHO05D001716 6.3e-35 153.7 437 34.6
SGA_v2.0_scaffold98G29313 Striga asiatica HOM05D003060 ORTHO05D001716 5.3e-34 150.6 488 29.5
Psat6g150200 Pisum sativum HOM05D003060 ORTHO05D001716 6.9e-34 150.2 480 31.0
Sc16g0008560 Simmondsia chinensis HOM05D003060 ORTHO05D001716 5.9e-33 147.1 570 29.8
unitig_899.g15593 Utricularia gibba HOM05D003060 ORTHO05D001716 1.0e-32 146.4 489 29.7
unitig_749.g13558 Utricularia gibba HOM05D003060 ORTHO05D001716 7.2e-31 140.2 472 28.2
HPP92_016933 Vanilla planifolia HOM05D003060 ORTHO05D001716 2.3e-29 135.2 585 27.7
COL.COLO4_13891 Corchorus olitorius HOM05D003060 ORTHO05D001716 3.0e-29 134.8 405 31.1
Aa31LG5G15950 Aethionema arabicum HOM05D003060 ORTHO05D001716 4.4e-28 131.0 503 28.4
Dinv40309 Davidia involucrata HOM05D003060 ORTHO05D001716 1.8e-26 125.6 270 38.5
CSS0023784 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 9.1e-26 123.2 408 30.6
CSS0019912 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 2.0e-25 122.1 408 30.9
Zm00001eb418070 Zea mays HOM05D003060 ORTHO05D001716 3.8e-24 117.9 508 28.9
Lsat_1_v5_gn_9_87360 Lactuca sativa HOM05D003060 ORTHO05D001716 1.5e-23 115.9 510 27.6
Atru.chr4.2820 Acer truncatum HOM05D003060 ORTHO05D001716 3.2e-23 114.8 326 31.9
CSS0018788 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 5.5e-23 114.0 376 30.1
Zm00001eb354250 Zea mays HOM05D003060 ORTHO05D001716 5.2e-21 107.5 392 31.9
Atru.chr4.2818 Acer truncatum HOM05D003060 ORTHO05D001716 1.5e-20 105.9 415 29.4
CSS0035849 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 2.0e-20 105.5 405 30.4
TWI09G1399 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 7.5e-20 103.6 296 30.7
Actinidia40263 Actinidia chinensis HOM05D003060 ORTHO05D001716 2.4e-18 98.6 177 37.9
Dinv05099 Davidia involucrata HOM05D003060 ORTHO05D001716 7.7e-17 93.6 231 33.3
TWI09G0082 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 5.5e-15 87.4 187 35.3
Lj6A674G26 Lonicera japonica HOM05D003060 ORTHO05D001716 3.6e-14 84.7 174 36.8
CSS0034622 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 1.2e-12 79.7 368 28.5
Cc00_g10560 Coffea canephora HOM05D003060 ORTHO05D001716 5.7e-12 77.4 174 29.9
CAN.G995.7 Capsicum annuum HOM05D003060 ORTHO05D001716 2.8e-11 75.1 246 30.9
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 2.8e-11 75.1 675 22.4
Actinidia28409 Actinidia chinensis HOM05D003060 ORTHO05D001716 4.8e-11 74.3 173 39.9
PGSC0003DMG400022663 Solanum tuberosum HOM05D003060 ORTHO05D001716 8.3e-11 73.6 173 31.8
Migut.N00095 Erythranthe guttata HOM05D003060 ORTHO05D001716 1.8e-10 72.4 156 32.1
Lsat_1_v5_gn_3_26180 Lactuca sativa HOM05D003060 ORTHO05D001716 2.4e-10 72.0 94 42.6
Solyc01g067040.2 Solanum lycopersicum HOM05D003060 ORTHO05D001716 4.1e-10 71.2 142 33.1
Sopen01g028750 Solanum pennellii HOM05D003060 ORTHO05D001716 7.0e-10 70.5 142 32.4
SEGI_40933 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 1.6e-09 69.3 562 23.0
CAN.G820.4 Capsicum annuum HOM05D003060 ORTHO05D001716 3.5e-09 68.2 137 31.4
AUR62000788 Chenopodium quinoa HOM05D003060 ORTHO05D001716 4.5e-09 67.8 108 41.7
AUR62005179 Chenopodium quinoa HOM05D003060 ORTHO05D001716 4.5e-09 67.8 108 41.7
Actinidia28408 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.0e-08 66.6 132 37.9
vmacro08136 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 8.5e-08 63.5 100 36.0
CAN.G995.6 Capsicum annuum HOM05D003060 ORTHO05D034007 2.5e-07 62.0 210 29.5
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 2.5e-07 62.0 81 39.5
Ciclev10006926m.g Citrus clementina HOM05D003060 ORTHO05D001716 3.2e-07 61.6 227 27.8
Actinidia27048 Actinidia chinensis HOM05D003060 ORTHO05D001716 5.5e-07 60.8 183 32.2
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 1.2e-06 59.7 83 36.1
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 2.7e-06 58.5 99 33.3
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 3.6e-06 58.2 99 33.3


User provided reference genes

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