Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 1.6e-39 165.6 82 100.0
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 1.3e-38 162.5 82 97.6
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 3.4e-18 94.7 82 61.0
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 4.9e-17 90.9 80 58.8
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 8.4e-17 90.1 80 58.8
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 2.5e-16 88.6 82 57.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 2.1e-15 85.5 83 51.8
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.3e-14 82.8 69 56.5
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.3e-14 82.8 69 56.5
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.3e-14 82.8 69 56.5
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.8e-14 82.4 82 51.2
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 1.9e-13 79.0 86 50.0
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.5e-13 78.6 83 54.2
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.1e-12 75.5 83 53.0
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.1e-12 75.5 82 50.0
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 3.7e-12 74.7 83 50.6
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 8.2e-12 73.6 72 48.6
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 1.1e-11 73.2 82 52.4
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 1.4e-11 72.8 80 48.8
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.4e-11 72.8 74 47.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.8e-11 72.4 73 47.9
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.8e-11 72.4 73 49.3
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.8e-11 72.4 73 47.9
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.8e-11 72.4 75 46.7
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.4e-11 72.0 83 49.4
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.1e-11 71.6 74 47.3
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 4.0e-11 71.2 72 45.8
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 4.0e-11 71.2 72 45.8
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.2e-10 69.7 82 41.5
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 1.2e-10 69.7 73 47.9
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-10 69.7 73 47.9
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 2.6e-10 68.6 82 40.2
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 3.4e-10 68.2 84 45.2
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 5.8e-10 67.4 69 43.5
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 7.6e-10 67.0 72 54.2
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 7.6e-10 67.0 72 54.2
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 7.6e-10 67.0 72 54.2
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 1.0e-09 66.6 82 41.5
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 2.2e-09 65.5 72 52.8
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 2.2e-09 65.5 72 52.8
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 2.2e-09 65.5 72 52.8
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 5.0e-09 64.3 72 54.2
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 6.5e-09 63.9 77 42.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 6.5e-09 63.9 68 51.5
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 8.4e-09 63.5 76 55.3
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 8.4e-09 63.5 88 48.9
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 1.1e-08 63.2 57 59.6
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 1.1e-08 63.2 76 52.6
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 1.1e-08 63.2 73 42.5
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.1e-08 63.2 68 48.5
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.4e-08 62.8 82 46.3
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.4e-08 62.8 86 44.2
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 2.5e-08 62.0 70 47.1
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 2.5e-08 62.0 68 51.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 4.2e-08 61.2 67 49.3
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 5.5e-08 60.8 73 47.9
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 7.1e-08 60.5 73 50.7
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 7.1e-08 60.5 80 38.8
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 7.1e-08 60.5 78 46.2
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 7.1e-08 60.5 72 47.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 7.1e-08 60.5 74 45.9
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 7.1e-08 60.5 70 45.7
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 9.3e-08 60.1 73 52.1
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.2e-07 59.7 73 42.5
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 1.6e-07 59.3 59 52.5
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.6e-07 59.3 76 46.1
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 50.7
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 41.1
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.1e-07 58.9 72 47.2
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 46.6
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 2.7e-07 58.5 82 41.5
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.5e-07 58.2 70 45.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 3.5e-07 58.2 73 45.2
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 3.5e-07 58.2 73 49.3
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.5e-07 58.2 70 50.0
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.5e-07 58.2 70 50.0
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-07 58.2 82 43.9
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 6.1e-07 57.4 73 45.2
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 6.1e-07 57.4 73 45.2
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 6.1e-07 57.4 73 45.2
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 6.1e-07 57.4 73 42.5
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 6.1e-07 57.4 77 53.2
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 7.9e-07 57.0 73 45.2
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 7.9e-07 57.0 73 45.2
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 7.9e-07 57.0 73 45.2
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.9e-07 57.0 70 51.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 7.9e-07 57.0 83 38.6
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 7.9e-07 57.0 83 39.8
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 7.9e-07 57.0 82 41.5
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-06 56.6 72 50.0
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-06 56.6 72 50.0
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 1.0e-06 56.6 72 50.0
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 1.0e-06 56.6 73 43.8
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.0e-06 56.6 78 44.9
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.0e-06 56.6 70 48.6
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.0e-06 56.6 70 48.6
QL03p011084 Quercus lobata HOM05D016210 ORTHO05D001531 1.0e-06 56.6 70 41.4
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.3e-06 56.2 70 42.9
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.3e-06 56.2 70 42.9
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 49.3
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 43.8
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 43.8
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 43.8
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 43.8
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 43.8
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 1.3e-06 56.2 82 42.7
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 73 49.3
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 1.3e-06 56.2 70 38.6
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.8e-06 55.8 81 43.2
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 1.8e-06 55.8 50 50.0
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 2.3e-06 55.5 72 48.6
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.3e-06 55.5 83 39.8
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 72 41.7
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 69 46.4
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 70 48.6
Manes.09G181400 Manihot esculenta HOM05D002165 ORTHO05D001531 3.0e-06 55.1 72 48.6
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 3.9e-06 54.7 74 43.2
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 3.9e-06 54.7 73 43.8
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 3.9e-06 54.7 72 48.6
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 3.9e-06 54.7 73 43.8
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 3.9e-06 54.7 73 43.8
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 3.9e-06 54.7 73 43.8
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 3.9e-06 54.7 72 48.6
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 3.9e-06 54.7 73 43.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.9e-06 54.7 76 42.1
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 3.9e-06 54.7 74 45.9
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 5.1e-06 54.3 82 43.9
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.1e-06 54.3 70 47.1
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 5.1e-06 54.3 73 42.5
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 5.1e-06 54.3 81 39.5
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 5.1e-06 54.3 81 39.5
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 5.1e-06 54.3 69 47.8
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 5.1e-06 54.3 82 40.2
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 6.7e-06 53.9 73 42.5
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.7e-06 53.9 84 46.4
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.7e-06 53.9 70 47.1
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 6.7e-06 53.9 75 45.3
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 8.7e-06 53.5 72 48.6
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 8.7e-06 53.5 72 48.6
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 8.7e-06 53.5 72 48.6
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 8.7e-06 53.5 73 45.2
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.7e-06 53.5 68 44.1
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 8.7e-06 53.5 82 40.2
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 8.7e-06 53.5 82 40.2


User provided reference genes

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