Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 7.5e-141 503.8 251 100.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 3.1e-118 428.7 239 87.9
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.9e-116 422.2 237 86.9
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.9e-115 419.5 233 87.1
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 4.1e-115 418.3 233 89.3
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.6e-114 416.4 236 86.4
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.6e-114 416.4 233 89.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.1e-114 416.0 232 87.9
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 6.0e-114 414.5 235 85.5
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.9e-113 411.8 233 86.3
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 3.9e-113 411.8 232 86.2
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 5.6e-112 407.9 232 86.6
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 7.3e-112 407.5 229 87.3
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 1.2e-111 406.8 235 86.0
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.6e-111 406.4 233 85.8
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 6.2e-111 404.4 236 83.5
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 6.2e-111 404.4 241 83.8
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 1.1e-110 403.7 220 90.5
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.1e-110 403.7 241 84.2
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.3e-110 402.5 232 85.3
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 2.3e-110 402.5 232 84.1
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 2.3e-110 402.5 244 82.4
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 5.2e-110 401.4 232 84.1
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 6.8e-110 401.0 232 83.6
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 6.8e-110 401.0 233 84.5
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.5e-109 399.8 231 84.4
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 2.6e-109 399.1 237 81.9
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 3.4e-109 398.7 232 85.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 3.4e-109 398.7 245 83.3
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 5.8e-109 397.9 241 82.6
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 5.8e-109 397.9 232 85.3
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 9.9e-109 397.1 233 83.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 2.2e-108 396.0 228 85.1
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 2.9e-108 395.6 232 84.1
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.9e-108 395.6 227 84.1
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.9e-108 395.6 227 84.1
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.4e-108 394.4 241 81.7
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 6.4e-108 394.4 237 83.1
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 6.4e-108 394.4 228 84.2
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 8.3e-108 394.0 220 86.8
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 8.3e-108 394.0 228 84.2
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.4e-107 393.3 233 84.1
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 1.9e-107 392.9 228 83.8
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.2e-107 392.1 232 83.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.6e-106 389.8 243 81.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.7e-106 389.0 228 83.3
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 7.8e-106 387.5 231 83.1
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.3e-105 386.0 239 79.5
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.3e-105 386.0 248 79.4
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.0e-105 385.6 236 82.2
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 6.6e-105 384.4 245 80.0
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 6.6e-105 384.4 245 80.0
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.1e-104 383.6 243 78.6
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.5e-104 383.3 224 83.5
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.9e-104 382.9 238 79.8
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.2e-103 380.2 220 83.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 2.1e-103 379.4 232 83.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 6.2e-103 377.9 226 84.5
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 3.4e-101 372.1 226 82.7
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.6e-101 370.9 245 76.3
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.6e-101 370.9 245 76.3
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 9.9e-101 370.5 239 80.8
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.3e-100 370.2 249 75.5
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.7e-100 369.8 236 75.8
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 5.4e-99 364.8 203 88.2
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 3.3e-96 355.5 234 78.6
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 5.6e-96 354.8 234 78.6
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.8e-95 352.4 199 87.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.4e-94 350.1 230 75.7
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 2.6e-93 345.9 231 72.7
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 6.4e-92 341.3 238 72.3
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.4e-91 340.1 225 73.3
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 4.2e-91 338.6 198 83.3
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 7.1e-91 337.8 249 70.7
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.6e-90 336.7 198 82.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.7e-90 335.9 249 71.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.6e-90 335.1 232 69.8
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 6.0e-90 334.7 230 70.9
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.0e-89 332.4 231 71.9
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.1e-88 330.5 231 70.1
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 4.3e-88 328.6 232 68.5
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.6e-85 317.8 234 72.6
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 2.7e-82 309.3 177 84.7
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.5e-80 302.8 236 67.8
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.5e-74 282.3 247 62.3
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.1e-72 277.3 220 67.7
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 3.1e-70 269.2 232 60.3
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 2.2e-63 246.5 138 85.5
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 6.3e-63 245.0 139 87.1
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.6e-61 239.6 219 52.5
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.3e-60 237.3 165 72.1
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 6.7e-57 224.9 150 72.0
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.5e-56 223.0 240 51.2
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 6.9e-54 214.9 219 50.7
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 7.0e-30 135.2 82 78.0
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 4.1e-22 109.4 217 31.8
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.0e-20 104.8 123 52.0
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 3.3e-11 73.2 57 63.2


User provided reference genes

Program Settings