Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001857 Daucus carota HOM05D004488 ORTHO05D005374 2.4e-48 195.3 105 100.0
GSVIVG01015661001 Vitis vinifera HOM05D004488 ORTHO05D005374 4.5e-39 164.5 103 81.6
Rhsim11G0142400 Rhododendron simsii HOM05D004488 ORTHO05D005374 8.5e-38 160.2 105 79.0
Thhalv10026279m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 1.1e-37 159.8 103 76.7
Potri.017G043200 Populus trichocarpa HOM05D004488 ORTHO05D005374 1.1e-37 159.8 102 77.5
BcaNung02186 Brassica carinata HOM05D004488 ORTHO05D005374 1.4e-37 159.5 103 75.7
Manes.07G041900 Manihot esculenta HOM05D004488 ORTHO05D005374 1.4e-37 159.5 101 78.2
CARHR241720 Cardamine hirsuta HOM05D004488 ORTHO05D005374 1.9e-37 159.1 99 78.8
Sp7g31350 Schrenkiella parvula HOM05D004488 ORTHO05D005374 1.9e-37 159.1 103 74.8
Thecc.02G129200 Theobroma cacao HOM05D004488 ORTHO05D005374 2.5e-37 158.7 102 77.5
Actinidia00306 Actinidia chinensis HOM05D004488 ORTHO05D005374 3.2e-37 158.3 101 79.2
Ciclev10029296m.g Citrus clementina HOM05D004488 ORTHO05D005374 5.5e-37 157.5 102 75.5
Eucgr.G00989 Eucalyptus grandis HOM05D004488 ORTHO05D005374 5.5e-37 157.5 105 77.1
Prupe.8G070100 Prunus persica HOM05D004488 ORTHO05D005374 7.2e-37 157.1 102 78.4
AL7G17880 Arabidopsis lyrata HOM05D004488 ORTHO05D005374 9.4e-37 156.8 103 74.8
AT4G33625 Arabidopsis thaliana HOM05D004488 ORTHO05D005374 9.4e-37 156.8 99 77.8
CANSAT54G1769 Cannabis sativa HOM05D004488 ORTHO05D005374 1.6e-36 156.0 102 75.5
Cpa.g.sc20.3 Carica papaya HOM05D004488 ORTHO05D005374 1.6e-36 156.0 103 76.7
Manes.10G097800 Manihot esculenta HOM05D004488 ORTHO05D005374 1.6e-36 156.0 101 77.2
Actinidia02393 Actinidia chinensis HOM05D004488 ORTHO05D005374 2.7e-36 155.2 101 77.2
FAN20G0168 Fragaria x ananassa HOM05D004488 ORTHO05D005374 3.6e-36 154.8 102 76.5
Carub.0007s0681 Capsella rubella HOM05D004488 ORTHO05D005374 4.7e-36 154.5 102 74.5
Cc02_g20910 Coffea canephora HOM05D004488 ORTHO05D005374 4.7e-36 154.5 102 75.5
Gohir.D13G049600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 4.7e-36 154.5 102 75.5
RcHm_v2.0_Chr6g0270971 Rosa chinensis HOM05D004488 ORTHO05D005374 6.1e-36 154.1 103 77.7
Hund06459 Selenicereus undatus HOM05D004488 ORTHO05D005374 6.1e-36 154.1 102 76.5
Rhsim11G0140000 Rhododendron simsii HOM05D004488 ORTHO05D005374 7.9e-36 153.7 100 80.0
Gohir.A13G050800 Gossypium hirsutum HOM05D004488 ORTHO05D005374 1.0e-35 153.3 102 74.5
THA.LOC104807182 Tarenaya hassleriana HOM05D004488 ORTHO05D005374 1.0e-35 153.3 99 77.8
CSS0011276 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 1.4e-35 152.9 101 73.3
Aqoxy6G00871 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 1.8e-35 152.5 102 75.5
CiPaw.05G029400 Carya illinoinensis HOM05D004488 ORTHO05D005374 1.8e-35 152.5 103 73.8
SGA_v2.0_scaffold83G26377 Striga asiatica HOM05D004488 ORTHO05D005374 1.8e-35 152.5 101 74.3
TAR381G0147 Trochodendron aralioides HOM05D004488 ORTHO05D005374 1.8e-35 152.5 103 71.8
CSS0006356 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 2.3e-35 152.1 101 73.3
COL.COLO4_32390 Corchorus olitorius HOM05D004488 ORTHO05D005374 2.3e-35 152.1 102 73.5
C07p59770 Brassica napus HOM05D004488 ORTHO05D005374 3.0e-35 151.8 112 69.6
BolC7t46423H Brassica oleracea HOM05D004488 ORTHO05D005374 3.0e-35 151.8 112 69.6
Dinv16003 Davidia involucrata HOM05D004488 ORTHO05D005374 3.0e-35 151.8 107 76.6
ECA234G4299 Erigeron canadensis HOM05D004488 ORTHO05D005374 3.9e-35 151.4 101 76.2
FvH4_2g11740 Fragaria vesca HOM05D004488 ORTHO05D005374 3.9e-35 151.4 102 75.5
MD05G1047700 Malus domestica HOM05D004488 ORTHO05D005374 3.9e-35 151.4 102 74.5
Aqoxy5G01383 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 5.1e-35 151.0 101 75.2
Glyma.08G067800 Glycine max HOM05D004488 ORTHO05D005374 6.7e-35 150.6 102 75.5
TWI14G0417 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 6.7e-35 150.6 102 74.5
VMungo0251G0098 Vigna mungo HOM05D004488 ORTHO05D005374 6.7e-35 150.6 102 73.5
CSS0028940 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 8.8e-35 150.2 102 74.5
Hma1.2p1_0908F.1_g235500 Hydrangea macrophylla HOM05D004488 ORTHO05D005374 8.8e-35 150.2 101 76.2
Phvul.002G213000 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 8.8e-35 150.2 102 73.5
Sc18g0007070 Simmondsia chinensis HOM05D004488 ORTHO05D005374 8.8e-35 150.2 103 72.8
Glyma.07G182000 Glycine max HOM05D004488 ORTHO05D005374 1.1e-34 149.8 102 73.5
CiPaw.06G157800 Carya illinoinensis HOM05D004488 ORTHO05D005374 1.5e-34 149.4 102 73.5
Lj9A348T63 Lonicera japonica HOM05D004488 ORTHO05D005374 1.5e-34 149.4 99 74.7
MBI16_g12465_MAGBIO Magnolia biondii HOM05D004488 ORTHO05D005374 1.5e-34 149.4 103 71.8
unitig_0.g894 Utricularia gibba HOM05D004488 ORTHO05D005374 1.5e-34 149.4 103 72.8
MSTRG.16621 Avicennia marina HOM05D004488 ORTHO05D005374 2.6e-34 148.7 103 70.9
MD10G1054500 Malus domestica HOM05D004488 ORTHO05D005374 2.6e-34 148.7 102 72.5
Oeu029681.1 Olea europaea HOM05D004488 ORTHO05D005374 2.6e-34 148.7 103 73.8
C01p05080 Brassica napus HOM05D004488 ORTHO05D005374 3.3e-34 148.3 104 73.1
BolC1t00490H Brassica oleracea HOM05D004488 ORTHO05D005374 3.3e-34 148.3 104 73.1
A01p04690 Brassica napus HOM05D004488 ORTHO05D005374 4.4e-34 147.9 104 73.1
BraA01t00452Z Brassica rapa HOM05D004488 ORTHO05D005374 4.4e-34 147.9 104 73.1
HanXRQChr16g0514551 Helianthus annuus HOM05D004488 ORTHO05D005374 4.4e-34 147.9 100 74.0
Nn5g29881 Nelumbo nucifera HOM05D004488 ORTHO05D005374 4.4e-34 147.9 101 73.3
Actinidia28030 Actinidia chinensis HOM05D004488 ORTHO05D005374 5.7e-34 147.5 101 77.2
HPP92_019609 Vanilla planifolia HOM05D004488 ORTHO05D005374 5.7e-34 147.5 101 71.3
PGR042G1599 Punica granatum HOM05D004488 ORTHO05D005374 7.4e-34 147.1 101 73.3
Migut.B00550 Erythranthe guttata HOM05D004488 ORTHO05D005374 9.7e-34 146.7 100 73.0
Glyma.13G256500 Glycine max HOM05D004488 ORTHO05D005374 9.7e-34 146.7 101 73.3
Rhsim11G0142300 Rhododendron simsii HOM05D004488 ORTHO05D005374 9.7e-34 146.7 101 71.3
Lsat_1_v5_gn_5_110001 Lactuca sativa HOM05D004488 ORTHO05D005374 1.3e-33 146.4 101 72.3
Medtr2g009630 Medicago truncatula HOM05D004488 ORTHO05D005374 1.3e-33 146.4 101 70.3
QL11p025232 Quercus lobata HOM05D004488 ORTHO05D005374 2.8e-33 145.2 102 69.6
PSO541G1276 Papaver somniferum HOM05D004488 ORTHO05D005374 8.2e-33 143.7 100 69.0
Oeu010528.2 Olea europaea HOM05D004488 ORTHO05D005374 1.4e-32 142.9 99 72.7
Phvul.006G201800 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 1.4e-32 142.9 101 72.3
Duzib132G0794 Durio zibethinus HOM05D004488 ORTHO05D005374 1.8e-32 142.5 105 68.6
Psat1g214000 Pisum sativum HOM05D004488 ORTHO05D005374 1.8e-32 142.5 101 68.3
Potri.007G115800 Populus trichocarpa HOM05D004488 ORTHO05D005374 1.8e-32 142.5 103 69.9
PSO675G8955 Papaver somniferum HOM05D004488 ORTHO05D005374 2.4e-32 142.1 101 68.3
Atru.chr6.1271 Acer truncatum HOM05D004488 ORTHO05D005374 3.1e-32 141.7 103 68.9
BraA03t15251Z Brassica rapa HOM05D004488 ORTHO05D005374 3.1e-32 141.7 85 78.8
PSO210G5219 Papaver somniferum HOM05D004488 ORTHO05D005374 3.1e-32 141.7 103 68.9
PGSC0003DMG400033581 Solanum tuberosum HOM05D004488 ORTHO05D005374 3.1e-32 141.7 103 70.9
Nn1g05574 Nelumbo nucifera HOM05D004488 ORTHO05D005374 5.3e-32 141.0 88 77.3
HanXRQChr10g0289991 Helianthus annuus HOM05D004488 ORTHO05D005374 7.0e-32 140.6 101 69.3
Solyc01g105980.3 Solanum lycopersicum HOM05D004488 ORTHO05D005374 7.0e-32 140.6 103 69.9
Sopen01g048360 Solanum pennellii HOM05D004488 ORTHO05D005374 7.0e-32 140.6 103 69.9
BcaC09g52174 Brassica carinata HOM05D004488 ORTHO05D005374 1.6e-31 139.4 85 77.6
Lj4g0013422 Lotus japonicus HOM05D004488 ORTHO05D005374 1.6e-31 139.4 102 67.6
Os07g0118300 Oryza sativa ssp. japonica HOM05D004488 ORTHO05D005374 1.6e-31 139.4 103 66.0
Sabra17G0029400 Salix brachista HOM05D004488 ORTHO05D005374 2.0e-31 139.0 85 76.5
Zm00001eb118020 Zea mays HOM05D004488 ORTHO05D005374 2.0e-31 139.0 103 70.9
Peaxi162Scf00299g00625 Petunia axillaris HOM05D004488 ORTHO05D005374 3.5e-31 138.3 102 69.6
Hund00379 Selenicereus undatus HOM05D004488 ORTHO05D005374 3.5e-31 138.3 98 68.4
CAN.G997.3 Capsicum annuum HOM05D004488 ORTHO05D005374 5.9e-31 137.5 103 69.9
Lalb_Chr16g0382951 Lupinus albus HOM05D004488 ORTHO05D005374 5.9e-31 137.5 102 69.6
CsaV3_4G014750 Cucumis sativus L. HOM05D004488 ORTHO05D005374 7.7e-31 137.1 97 70.1
vmacro01860 Vaccinium macrocarpon HOM05D004488 ORTHO05D005374 1.7e-30 136.0 100 67.0
Lalb_Chr05g0217811 Lupinus albus HOM05D004488 ORTHO05D005374 2.2e-30 135.6 102 65.7
Ah.01g023950 Amaranthus hybridus HOM05D004488 ORTHO05D005374 3.8e-30 134.8 100 67.0
ClCG10G009630 Citrullus lanatus HOM05D004488 ORTHO05D005374 3.8e-30 134.8 96 69.8
EL10Ac9g22071 Beta vulgaris HOM05D004488 ORTHO05D005374 5.0e-30 134.4 98 68.4
CDE01G0475 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 5.0e-30 134.4 101 66.3
TAR625G0886 Trochodendron aralioides HOM05D004488 ORTHO05D005374 5.0e-30 134.4 103 68.9
Rhsim11G0139900 Rhododendron simsii HOM05D004488 ORTHO05D005374 6.5e-30 134.0 122 59.0
Sed0014769 Sechium edule HOM05D004488 ORTHO05D005374 6.5e-30 134.0 97 69.1
Lj6g0006499 Lotus japonicus HOM05D004488 ORTHO05D005374 8.5e-30 133.7 102 68.6
arahy.Tifrunner.gnm1.ann1.YWY5YF Arachis hypogaea HOM05D004488 ORTHO05D005374 1.1e-29 133.3 85 76.5
ATR0767G217 Amborella trichopoda HOM05D004488 ORTHO05D005374 1.9e-29 132.5 112 63.4
CDE04G0584 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 1.9e-29 132.5 102 61.8
AUR62027109 Chenopodium quinoa HOM05D004488 ORTHO05D005374 1.9e-29 132.5 100 65.0
arahy.Tifrunner.gnm1.ann1.80YYCP Arachis hypogaea HOM05D004488 ORTHO05D005374 2.5e-29 132.1 85 75.3
Gorai.013G055400 Gossypium raimondii HOM05D004488 ORTHO05D005374 2.5e-29 132.1 85 74.1
Aa31sc21G80 Aethionema arabicum HOM05D004488 ORTHO05D005374 5.5e-29 131.0 140 55.0
SalBow6G2847 Salvia bowleyana HOM05D004488 ORTHO05D005374 1.6e-28 129.4 85 72.9
SalBow6G6277 Salvia bowleyana HOM05D004488 ORTHO05D005374 1.6e-28 129.4 85 72.9
AUR62012885 Chenopodium quinoa HOM05D004488 ORTHO05D005374 2.1e-28 129.0 100 64.0
FAN24G0482 Fragaria x ananassa HOM05D004488 ORTHO05D005374 4.7e-28 127.9 102 67.6
DCAR_032425 Daucus carota HOM05D004488 ORTHO05D005374 6.7e-27 124.0 102 68.6
TAR625G0448 Trochodendron aralioides HOM05D004488 ORTHO05D005374 5.7e-26 120.9 85 67.1
SEGI_26358 Sequoiadendron giganteum HOM05D004488 ORTHO05D005374 2.2e-25 119.0 99 61.6
VMungo0540G1072 Vigna mungo HOM05D004488 ORTHO05D005374 2.2e-25 119.0 101 59.4
Nitab4.5_0002095g0050 Nicotiana tabacum HOM05D004488 ORTHO05D005374 2.8e-25 118.6 85 68.2
Nitab4.5_0001636g0030 Nicotiana tabacum HOM05D004488 ORTHO05D005374 1.1e-24 116.7 95 58.9
TPR.G8448 Trifolium pratense HOM05D004488 ORTHO05D005374 4.1e-24 114.8 82 70.7
MELO3C018054.2 Cucumis melo HOM05D004488 ORTHO05D005374 3.8e-22 108.2 81 65.4
SMO361G0551 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 5.0e-22 107.8 98 55.1
AagrBONN_evm.TU.Sc2ySwM_117.2605 Anthoceros agrestis HOM05D004488 ORTHO05D005374 1.1e-21 106.7 96 61.5
SMO361G0333 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 1.1e-21 106.7 98 59.2
SMO361G0358 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.5e-21 105.5 98 59.2
Pp3c13_16610 Physcomitrium patens HOM05D004488 ORTHO05D005374 6.1e-20 100.9 98 55.1
Zm00001eb299000 Zea mays HOM05D004488 ORTHO05D005374 1.0e-19 100.1 85 56.5
Pp3c4_7970 Physcomitrium patens HOM05D004488 ORTHO05D005374 2.3e-19 99.0 97 54.6
CDE02G4257 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 5.2e-19 97.8 81 58.0
Lj5C230T1 Lonicera japonica HOM05D004488 ORTHO05D005374 2.6e-18 95.5 66 69.7
Haze_10521 Corylus avellana HOM05D004488 ORTHO05D005374 3.4e-18 95.1 88 59.1
Mapoly0135s0052 Marchantia polymorpha HOM05D004488 ORTHO05D005374 3.4e-18 95.1 93 53.8
BraA03t15274Z Brassica rapa HOM05D004488 ORTHO05D005374 1.6e-15 86.3 62 72.6
Pp3c15_10510 Physcomitrium patens HOM05D004488 ORTHO05D005374 1.6e-15 86.3 96 47.9
Sed0000556 Sechium edule HOM05D004488 ORTHO05D005374 2.2e-14 82.4 59 69.5
Cre09.g398845 Chlamydomonas reinhardtii HOM05D004488 ORTHO05D005374 6.8e-11 70.9 102 40.2
SMO361G0062 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 1.7e-09 66.2 96 45.8
Gohir.A11G229600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 3.7e-09 65.1 44 75.0
Thhalv10002778m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 1.4e-08 63.2 41 75.6
Actinidia30718 Actinidia chinensis HOM05D004488 ORTHO05D005374 3.5e-07 58.5 47 59.6
Zm00001eb345470 Zea mays HOM05D001942 ORTHO05D008996 5.9e-07 57.8 49 63.3
Zm00001eb130380 Zea mays HOM05D001942 ORTHO05D008996 3.8e-06 55.1 49 61.2


User provided reference genes

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