Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 2.1e-202 708.8 347 100.0
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 3.1e-177 625.2 347 85.3
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 3.4e-176 621.7 348 85.3
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.7e-175 619.4 348 85.3
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.2e-173 613.2 348 84.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.1e-173 612.5 348 84.5
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 7.8e-173 610.5 348 83.9
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.0e-172 610.1 346 84.4
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.7e-172 609.4 348 84.2
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 3.0e-172 608.6 348 83.9
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 3.9e-172 608.2 348 83.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 3.9e-172 608.2 348 83.9
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.9e-171 605.9 347 83.9
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 3.3e-171 605.1 347 83.6
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 9.6e-171 603.6 348 83.9
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.6e-170 602.8 347 82.1
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 3.6e-170 601.7 347 83.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.8e-170 601.3 348 83.0
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.8e-169 599.4 348 83.0
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 2.4e-169 599.0 346 83.8
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 9.0e-169 597.0 348 82.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.0e-169 597.0 364 79.4
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.5e-168 596.3 347 81.8
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 4.5e-168 594.7 348 82.5
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 7.6e-168 594.0 348 80.2
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 6.4e-167 590.9 348 81.9
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 6.4e-167 590.9 348 81.3
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.1e-166 590.1 347 81.3
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.9e-166 589.3 347 81.3
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.9e-166 589.3 348 80.7
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.4e-166 589.0 347 81.3
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 3.2e-166 588.6 347 80.7
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 3.2e-166 588.6 347 80.1
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.2e-166 588.6 347 81.3
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 9.3e-166 587.0 347 81.3
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 3.5e-165 585.1 345 79.4
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.5e-165 585.1 345 80.9
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 6.0e-165 584.3 347 80.7
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.8e-164 582.8 370 77.6
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.3e-164 582.4 348 79.0
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 3.0e-164 582.0 344 81.1
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 3.0e-164 582.0 346 79.8
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 8.7e-164 580.5 347 79.3
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 8.7e-164 580.5 345 80.0
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.5e-163 579.7 345 79.4
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.9e-163 579.3 348 79.6
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.9e-163 579.3 348 80.7
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.5e-163 578.9 345 79.7
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 4.3e-163 578.2 348 78.7
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 4.3e-163 578.2 353 78.8
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.8e-162 575.5 347 79.5
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.7e-162 575.1 347 79.3
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.1e-161 573.5 347 78.7
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.4e-161 573.2 345 78.6
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.4e-161 573.2 347 78.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 3.1e-161 572.0 348 79.3
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.1e-161 572.0 347 77.8
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 4.0e-161 571.6 349 78.8
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 4.0e-161 571.6 348 78.4
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 6.9e-161 570.9 347 78.4
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 6.9e-161 570.9 351 76.9
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 9.0e-161 570.5 356 77.0
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 9.0e-161 570.5 345 78.6
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.2e-160 570.1 351 77.8
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.2e-160 570.1 344 78.5
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.4e-160 568.5 352 78.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 3.4e-160 568.5 345 78.6
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.6e-160 567.4 347 78.1
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 7.6e-160 567.4 330 80.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 7.6e-160 567.4 330 81.2
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 9.9e-160 567.0 332 80.4
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 9.9e-160 567.0 347 76.4
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.3e-159 566.6 345 78.3
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.7e-159 566.2 347 78.1
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.2e-159 565.8 347 77.5
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 2.2e-159 565.8 345 77.7
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.9e-159 565.5 347 78.4
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.9e-159 565.5 339 79.1
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.4e-158 563.1 330 80.0
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 2.5e-158 562.4 337 79.5
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 3.2e-158 562.0 345 77.7
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 4.2e-158 561.6 345 77.7
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.1e-158 560.8 345 77.7
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.2e-157 560.1 330 80.3
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.6e-157 559.7 347 76.4
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.6e-157 559.7 346 76.6
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 6.0e-157 557.8 349 75.4
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.3e-156 556.6 346 76.3
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.3e-156 555.8 347 75.8
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 2.3e-156 555.8 401 69.8
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 3.0e-156 555.4 346 77.2
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 3.9e-156 555.1 327 80.1
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 6.7e-156 554.3 348 76.7
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.3e-154 550.1 319 81.5
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 3.7e-154 548.5 345 75.7
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 4.6e-149 531.6 347 73.8
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 2.5e-142 509.2 322 76.1
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 7.2e-142 507.7 332 72.0
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-141 506.1 322 75.5
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 2.3e-140 502.7 330 71.5
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.3e-139 498.4 343 74.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.4e-137 492.7 335 69.6
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 2.4e-137 492.7 330 71.5
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.5e-136 490.0 344 70.1
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.4e-132 476.9 330 67.0
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 9.1e-129 464.2 345 68.4
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.0e-124 450.7 346 66.5
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 7.0e-121 438.0 329 62.9
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.8e-119 432.2 346 62.7
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 4.4e-115 418.7 391 55.5
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.8e-113 413.3 232 83.6
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 2.6e-107 392.9 233 79.8
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 7.5e-107 391.3 328 57.0
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 5.4e-105 385.2 232 76.7
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 4.5e-104 382.1 326 58.9
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 3.8e-103 379.0 222 78.8
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 1.9e-102 376.7 232 75.0
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 8.9e-92 341.3 373 47.5
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.0e-67 260.4 287 44.3
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 2.6e-67 260.0 171 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.8e-60 237.3 160 68.8
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.8e-60 237.3 190 65.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 8.4e-50 201.8 166 63.3
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.4e-44 184.5 131 69.5
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.7e-16 89.7 123 47.2
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.7e-13 81.3 88 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.7e-13 81.3 88 48.9
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 9.4e-09 65.5 35 77.1


User provided reference genes

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