Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 7.6e-186 653.7 327 100.0
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 6.7e-158 560.8 329 83.9
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 8.8e-158 560.5 329 83.9
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 9.1e-155 550.4 327 82.6
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 7.7e-154 547.4 333 79.6
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.0e-153 547.0 328 81.1
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.8e-153 545.0 330 81.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 6.5e-153 544.3 331 80.7
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 6.5e-153 544.3 328 81.1
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 5.5e-152 541.2 326 81.9
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 7.2e-152 540.8 328 80.5
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.6e-151 539.7 328 79.3
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 3.6e-151 538.5 333 79.3
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 8.0e-151 537.3 328 79.0
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 8.0e-151 537.3 328 80.5
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.0e-150 537.0 329 79.6
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.4e-150 536.6 328 79.3
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.0e-150 535.4 333 78.4
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.9e-150 535.0 333 78.1
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 5.2e-150 534.6 327 78.9
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 6.7e-150 534.3 327 78.9
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 8.8e-150 533.9 330 77.9
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.1e-149 533.5 330 79.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.1e-149 533.5 328 79.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.5e-149 533.1 333 78.1
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.0e-149 532.7 328 79.9
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 4.4e-149 531.6 334 78.1
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 5.7e-149 531.2 328 80.2
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 7.4e-149 530.8 328 79.6
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 9.7e-149 530.4 328 78.7
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 9.7e-149 530.4 330 77.0
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 2.8e-148 528.9 324 81.5
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 4.8e-148 528.1 329 76.9
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 8.2e-148 527.3 330 77.0
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.4e-147 526.6 334 78.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.8e-147 526.2 330 77.9
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 1.8e-147 526.2 330 77.9
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.8e-147 526.2 325 78.5
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.8e-147 526.2 329 76.9
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 2.4e-147 525.8 329 78.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 2.4e-147 525.8 326 79.4
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 4.1e-147 525.0 328 77.7
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 4.1e-147 525.0 328 77.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 5.3e-147 524.6 330 77.6
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 5.3e-147 524.6 334 77.5
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 5.3e-147 524.6 327 77.7
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 7.0e-147 524.2 331 77.9
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 9.1e-147 523.9 334 76.9
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.0e-146 522.7 401 69.1
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 3.5e-146 521.9 328 78.0
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 4.5e-146 521.5 333 76.9
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.0e-145 520.4 331 77.0
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.0e-145 520.4 331 77.0
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.0e-145 520.4 330 77.3
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 1.3e-145 520.0 334 76.6
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 1.3e-145 520.0 334 76.6
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.7e-145 519.6 331 75.5
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.7e-145 519.6 331 77.0
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 6.5e-145 517.7 334 76.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 8.5e-145 517.3 329 76.6
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 1.1e-144 516.9 334 76.3
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.9e-144 516.2 326 75.8
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 3.2e-144 515.4 328 76.5
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 4.2e-144 515.0 323 77.1
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 7.2e-144 514.2 329 75.7
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.2e-144 514.2 359 71.3
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.2e-143 513.5 359 71.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.1e-143 512.7 328 77.1
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 3.6e-143 511.9 334 74.9
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 6.1e-143 511.1 325 76.6
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 8.0e-143 510.8 313 78.6
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 8.0e-143 510.8 329 76.6
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.0e-142 510.4 343 74.6
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 1.0e-142 510.4 327 75.5
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.0e-142 510.4 328 76.2
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.0e-142 508.8 328 74.7
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 4.0e-142 508.4 326 76.1
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 2.6e-141 505.8 330 75.5
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 7.5e-141 504.2 328 75.0
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 9.7e-141 503.8 329 74.8
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.7e-140 503.1 331 73.7
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 3.7e-140 501.9 331 75.2
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.3e-139 498.0 333 72.7
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 5.3e-139 498.0 331 74.0
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.5e-138 495.4 331 72.5
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 3.8e-137 491.9 329 74.2
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-136 490.3 328 73.5
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 4.2e-136 488.4 326 73.6
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 6.1e-135 484.6 347 70.3
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.0e-130 469.5 333 68.8
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 8.6e-129 464.2 316 72.2
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.4e-126 456.8 329 67.2
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 2.4e-123 446.0 328 68.3
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.6e-122 443.4 333 65.5
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 7.0e-115 417.9 352 63.4
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 1.7e-113 413.3 328 64.9
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 2.5e-112 409.5 286 69.6
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.3e-110 402.9 283 72.4
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.3e-108 397.1 343 63.6
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.9e-108 395.2 330 59.1
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 3.2e-107 392.5 332 58.7
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 8.6e-105 384.4 270 67.8
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 6.8e-102 374.8 329 57.4
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 6.4e-100 368.2 335 57.3
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.3e-96 355.9 329 56.2
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.8e-95 352.8 225 75.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-90 337.4 329 53.2
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.5e-90 335.9 223 73.5
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-90 335.1 330 51.5
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 5.1e-89 332.0 332 52.7
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.9e-88 330.1 332 51.5
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 9.6e-88 327.8 330 50.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-87 326.6 331 53.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 6.2e-87 325.1 333 52.6
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-86 323.9 330 51.8
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 9.0e-86 321.2 326 52.8
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-85 320.9 330 51.2
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 9.9e-85 317.8 330 50.9
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-84 317.4 329 51.1
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 4.9e-84 315.5 332 51.5
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 6.4e-84 315.1 220 72.3
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 9.3e-83 311.2 331 49.8
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 4.6e-82 308.9 329 50.5
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 3.0e-81 306.2 233 68.7
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.1e-81 305.4 329 50.5
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 5.4e-75 285.4 329 48.0
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-73 280.4 330 45.8
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.9e-72 276.9 326 47.2
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 5.6e-72 275.4 330 46.7
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.1e-70 269.6 148 86.5
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-66 255.4 264 50.0
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-55 220.7 216 52.3
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.3e-55 218.8 144 72.9
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 2.9e-52 209.9 169 65.7
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.6e-50 203.0 173 61.8
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 2.5e-48 196.8 140 67.1
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 4.1e-46 189.5 208 51.0
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.9e-44 183.3 323 37.8
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 1.2e-42 177.9 136 65.4
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-42 177.2 195 49.2
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.0e-41 174.9 105 76.2
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 3.9e-41 172.9 126 67.5
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-40 170.6 177 48.0
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-38 164.5 158 53.8
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.4e-32 142.9 363 32.2
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 1.7e-28 131.0 79 77.2
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 4.2e-27 126.3 286 31.1
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 9.4e-27 125.2 353 28.9
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 2.6e-24 117.1 67 71.6
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.1e-22 109.8 301 29.9
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.2e-21 108.2 343 28.3
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-21 107.8 98 53.1
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 4.0e-17 93.2 60 73.3
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-16 91.7 58 79.3
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.0e-16 90.9 58 77.6
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.4e-16 90.1 340 27.9
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.8e-15 87.0 239 31.4
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.8e-14 84.3 310 30.0
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.0e-12 78.6 50 72.0
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.9e-12 77.0 45 75.6
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 1.1e-11 75.1 64 56.2
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 1.5e-11 74.7 46 78.3
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 1.9e-11 74.3 47 78.7
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 5.6e-11 72.8 50 72.0
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.0e-09 68.6 145 34.5
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 9.2e-06 55.5 92 38.0


User provided reference genes

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