Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001755 Daucus carota HOM05D005763 ORTHO05D005970 1.1e-204 716.5 389 100.0
Dinv19414 Davidia involucrata HOM05D005763 ORTHO05D005970 1.7e-70 270.8 510 38.4
CSS0027988 Camellia sinensis var. sinensis HOM05D005763 ORTHO05D005970 1.1e-53 214.9 590 32.2
Lj9A299T32 Lonicera japonica HOM05D005763 ORTHO05D005970 4.7e-49 199.5 264 48.5
vmacro01712 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 9.1e-45 185.3 281 43.1
Rhsim11G0122700 Rhododendron simsii HOM05D005763 ORTHO05D005970 1.2e-44 184.9 276 43.8
ECA236G4930 Erigeron canadensis HOM05D005763 ORTHO05D005970 2.9e-43 180.3 367 36.2
Cfa004488 Carpinus fangiana HOM05D005763 ORTHO05D005970 7.2e-42 175.6 537 33.1
Cc02_g23160 Coffea canephora HOM05D005763 ORTHO05D005970 1.0e-40 171.8 595 27.1
Nitab4.5_0000787g0220 Nicotiana tabacum HOM05D005763 ORTHO05D005970 1.0e-40 171.8 593 29.3
Nitab4.5_0004106g0020 Nicotiana tabacum HOM05D005763 ORTHO05D005970 1.1e-37 161.8 579 28.7
PGSC0003DMG400024917 Solanum tuberosum HOM05D005763 ORTHO05D005970 1.4e-37 161.4 381 36.5
Lsat_1_v5_gn_7_76141 Lactuca sativa HOM05D005763 ORTHO05D005970 7.0e-37 159.1 579 32.0
CiPaw.05G004900 Carya illinoinensis HOM05D005763 ORTHO05D005970 1.6e-36 157.9 607 28.5
Haze_10045 Corylus avellana HOM05D005763 ORTHO05D005970 2.0e-36 157.5 529 32.1
QL02p100429 Quercus lobata HOM05D005763 ORTHO05D005970 4.5e-36 156.4 603 28.7
TAR628G0443 Trochodendron aralioides HOM05D005763 ORTHO05D005970 1.7e-35 154.5 289 35.3
Migut.B00776 Erythranthe guttata HOM05D005763 ORTHO05D005970 6.6e-35 152.5 592 27.7
MSTRG.16490 Avicennia marina HOM05D005763 ORTHO05D005970 1.5e-34 151.4 585 28.4
CAN.G855.2 Capsicum annuum HOM05D005763 ORTHO05D005970 4.3e-34 149.8 578 28.2
Solyc01g103570.3 Solanum lycopersicum HOM05D005763 ORTHO05D005970 1.2e-33 148.3 381 34.9
Oeu000133.1 Olea europaea HOM05D005763 ORTHO05D005970 1.6e-33 147.9 270 40.7
Sopen01g045920 Solanum pennellii HOM05D005763 ORTHO05D005970 2.8e-33 147.1 383 35.2
Nn7g37262 Nelumbo nucifera HOM05D005763 ORTHO05D005970 6.1e-33 146.0 278 36.3
Actinidia39001 Actinidia chinensis HOM05D005763 ORTHO05D005970 1.8e-32 144.4 255 39.2
MD15G1435300 Malus domestica HOM05D005763 ORTHO05D005970 1.8e-32 144.4 396 34.6
HanXRQChr11g0338791 Helianthus annuus HOM05D005763 ORTHO05D005970 2.2e-30 137.5 368 35.9
Peaxi162Scf00011g00123 Petunia axillaris HOM05D005763 ORTHO05D005970 1.1e-29 135.2 374 32.4
Prupe.1G578900 Prunus persica HOM05D005763 ORTHO05D005970 1.4e-29 134.8 394 35.0
GSVIVG01023250001 Vitis vinifera HOM05D005763 ORTHO05D005970 1.6e-28 131.3 641 26.2
TWI14G0927 Tripterygium wilfordii HOM05D005763 ORTHO05D005970 1.1e-26 125.2 599 26.7
SGA_v2.0_scaffold304G47918 Striga asiatica HOM05D005763 ORTHO05D005970 1.5e-26 124.8 391 30.4
RcHm_v2.0_Chr7g0220691 Rosa chinensis HOM05D005763 ORTHO05D005970 5.6e-26 122.9 383 31.9
Atru.chr6.496 Acer truncatum HOM05D005763 ORTHO05D005970 1.8e-24 117.9 295 39.7
Cpa.g.sc113.46 Carica papaya HOM05D005763 ORTHO05D005970 4.0e-24 116.7 375 32.0
Ciclev10000672m.g Citrus clementina HOM05D005763 ORTHO05D005970 5.2e-24 116.3 593 27.8
FAN04G2209 Fragaria x ananassa HOM05D005763 ORTHO05D005970 6.8e-24 115.9 510 29.8
Gohir.A01G183700 Gossypium hirsutum HOM05D005763 ORTHO05D005970 6.8e-24 115.9 392 33.9
FAN08G3368 Fragaria x ananassa HOM05D005763 ORTHO05D005970 1.5e-23 114.8 518 29.7
MELO3C011821.2 Cucumis melo HOM05D005763 ORTHO05D005970 3.4e-23 113.6 374 29.7
Potri.004G223700 Populus trichocarpa HOM05D005763 ORTHO05D005970 7.5e-23 112.5 395 32.7
FvH4_5g28621 Fragaria vesca HOM05D005763 ORTHO05D005970 2.2e-22 110.9 519 29.5
Sc07g0005120 Simmondsia chinensis HOM05D005763 ORTHO05D005970 2.2e-22 110.9 375 29.9
FAN18G2102 Fragaria x ananassa HOM05D005763 ORTHO05D005970 3.7e-22 110.2 521 29.4
CsaV3_5G029800 Cucumis sativus L. HOM05D005763 ORTHO05D005970 6.4e-22 109.4 381 29.7
PSO017G0231 Papaver somniferum HOM05D005763 ORTHO05D005970 1.9e-21 107.8 372 28.0
PSO170G4663 Papaver somniferum HOM05D005763 ORTHO05D005970 5.4e-21 106.3 375 27.5
Duzib132G0801 Durio zibethinus HOM05D005763 ORTHO05D005970 1.2e-20 105.1 511 30.1
Gorai.002G216800 Gossypium raimondii HOM05D005763 ORTHO05D005970 1.2e-20 105.1 391 32.0
Aqoxy5G02633 Aquilegia oxysepala HOM05D005763 ORTHO05D005970 1.6e-20 104.8 283 31.4
EL10Ac6g14141 Beta vulgaris HOM05D005763 ORTHO05D005970 4.6e-20 103.2 382 30.9
THA.LOC104820230 Tarenaya hassleriana HOM05D005763 ORTHO05D005970 4.6e-20 103.2 395 31.6
Eucgr.I02762 Eucalyptus grandis HOM05D005763 ORTHO05D005970 6.0e-20 102.8 593 26.3
Sed0010757 Sechium edule HOM05D005763 ORTHO05D005970 6.0e-20 102.8 379 31.9
AUR62028255 Chenopodium quinoa HOM05D005763 ORTHO05D005970 1.7e-19 101.3 383 30.0
Thecc.02G018700 Theobroma cacao HOM05D005763 ORTHO05D005970 3.9e-19 100.1 486 28.6
Hund15460 Selenicereus undatus HOM05D005763 ORTHO05D005970 5.6e-18 96.3 391 29.9
CANSAT54G0901 Cannabis sativa HOM05D005763 ORTHO05D005970 6.2e-17 92.8 296 32.1
PGR142G3615 Punica granatum HOM05D005763 ORTHO05D005970 2.3e-16 90.9 588 26.2
COL.COLO4_17725 Corchorus olitorius HOM05D005763 ORTHO05D005970 8.9e-16 89.0 600 26.5
unitig_26.g9070 Utricularia gibba HOM05D005763 ORTHO05D005970 2.0e-15 87.8 347 27.7
AUR62040622 Chenopodium quinoa HOM05D005763 ORTHO05D005970 3.4e-15 87.0 254 31.9
ATR1136G018 Amborella trichopoda HOM05D005763 ORTHO05D005970 3.7e-14 83.6 267 27.7
CARHR054180 Cardamine hirsuta HOM05D005763 ORTHO05D005970 1.9e-13 81.3 381 27.8
CDE08G1622 Ceratophyllum demersum HOM05D005763 ORTHO05D005970 1.9e-13 81.3 442 25.8
HPP92_011333 Vanilla planifolia HOM05D005763 ORTHO05D005970 3.5e-12 77.0 380 26.1
BcaB04g20185 Brassica carinata HOM05D005763 ORTHO05D005970 1.7e-11 74.7 388 27.1
AL2G18480 Arabidopsis lyrata HOM05D005763 ORTHO05D005970 6.6e-11 72.8 384 27.1
Lj6g0006999 Lotus japonicus HOM05D005763 ORTHO05D005970 1.1e-10 72.0 522 26.2
SalBow7G1738 Salvia bowleyana HOM05D005763 ORTHO05D005970 3.3e-10 70.5 491 26.5
Aa31LG2G11010 Aethionema arabicum HOM05D000113 ORTHO05D005835 1.6e-09 68.2 390 27.9
Manes.10G118700 Manihot esculenta HOM05D005763 ORTHO05D005970 3.6e-09 67.0 604 25.0
TPR.G2121 Trifolium pratense HOM05D005763 ORTHO05D005970 4.7e-09 66.6 399 24.6
MBI06_g48164_MAGBIO Magnolia biondii HOM05D005763 ORTHO05D005970 3.1e-08 63.9 134 37.3
BcaC09g49515 Brassica carinata HOM05D005763 ORTHO05D005970 8.9e-08 62.4 388 26.3
Psat1g222400 Pisum sativum HOM05D005763 ORTHO05D005970 1.5e-07 61.6 392 26.3
Sabra01G0169400 Salix brachista HOM05D005763 ORTHO05D005970 2.6e-07 60.8 110 33.6
A01p28160 Brassica napus HOM05D005763 ORTHO05D005970 3.4e-07 60.5 395 23.5
BraA01t02945Z Brassica rapa HOM05D005763 ORTHO05D005970 3.4e-07 60.5 395 23.5
Hma1.2p1_0633F.1_g192600 Hydrangea macrophylla HOM05D005763 ORTHO05D005970 4.4e-07 60.1 208 31.7
Medtr2g005820 Medicago truncatula HOM05D005763 ORTHO05D005970 5.8e-07 59.7 404 25.7
AL2G18660 Arabidopsis lyrata HOM05D005763 ORTHO05D005970 7.6e-07 59.3 380 26.3
C01p35700 Brassica napus HOM05D005763 ORTHO05D005970 1.3e-06 58.5 388 26.0
BolC1t03529H Brassica oleracea HOM05D005763 ORTHO05D005970 1.3e-06 58.5 388 26.0
Carub.0002s0660 Capsella rubella HOM05D005763 ORTHO05D005970 3.7e-06 57.0 381 24.7
AT1G58025 Arabidopsis thaliana HOM05D005763 ORTHO05D005970 6.4e-06 56.2 368 23.9
Os08g0109500 Oryza sativa ssp. japonica HOM05D005763 ORTHO05D005970 8.4e-06 55.8 369 25.7


User provided reference genes

Program Settings