Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 6.8e-82 307.4 166 100.0
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 7.3e-52 207.6 171 68.4
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 3.8e-24 115.5 197 45.7
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.8e-21 106.7 191 47.6
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 1.1e-20 104.0 197 43.7
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 2.5e-20 102.8 198 43.4
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 7.4e-20 101.3 176 50.0
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.3e-19 100.5 180 46.7
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 8.2e-19 97.8 172 44.2
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.8e-18 96.7 194 42.3
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 1.2e-17 94.0 193 43.5
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 2.6e-17 92.8 200 40.5
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 3.4e-17 92.4 144 49.3
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 7.7e-17 91.3 185 43.2
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 3.8e-16 89.0 188 41.0
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 5.0e-16 88.6 168 43.5
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 6.5e-16 88.2 190 40.5
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 1.1e-15 87.4 163 42.9
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 1.9e-15 86.7 173 43.4
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 1.9e-15 86.7 177 45.2
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 2.5e-15 86.3 195 37.9
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 2.5e-15 86.3 188 42.0
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 4.2e-15 85.5 175 45.1
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 5.5e-15 85.1 177 44.1
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 1.2e-14 84.0 183 38.8
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 1.2e-14 84.0 178 38.2
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 6.1e-14 81.6 204 35.8
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 1.8e-13 80.1 134 44.0
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 3.9e-13 79.0 172 40.1
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 5.1e-13 78.6 104 55.8
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 8.8e-13 77.8 175 42.9
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.1e-12 77.4 175 41.1
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 1.5e-12 77.0 170 39.4
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 2.0e-12 76.6 175 41.1
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 4.3e-12 75.5 185 36.8
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 7.4e-12 74.7 170 41.2
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 1.7e-11 73.6 189 37.6
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 3.7e-11 72.4 167 38.3
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 4.8e-11 72.0 77 57.1
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 4.8e-11 72.0 182 36.8
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 4.8e-11 72.0 176 36.4
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 8.2e-11 71.2 170 38.8
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 1.4e-10 70.5 166 37.3
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 1.4e-10 70.5 166 38.0
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 2.4e-10 69.7 173 37.0
FAN18G0201 Fragaria x ananassa HOM05D031323 ORTHO05D010082 6.9e-10 68.2 165 40.6
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 9.1e-10 67.8 167 37.7
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 3.4e-09 65.9 126 40.5
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 4.5e-09 65.5 179 35.2
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 5.9e-09 65.1 172 40.1
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.7e-08 63.5 132 43.9
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 5.0e-08 62.0 73 46.6
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 6.5e-08 61.6 94 43.6
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 8.5e-08 61.2 94 43.6
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 8.5e-08 61.2 90 47.8
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 1.1e-07 60.8 94 43.6
AL7G28970 Arabidopsis lyrata HOM05D010278 ORTHO05D012429 1.9e-07 60.1 99 46.5
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 1.9e-07 60.1 171 35.7
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.5e-07 59.7 107 45.8
CARHR231710 Cardamine hirsuta HOM05D010278 ORTHO05D012429 2.5e-07 59.7 96 43.8
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 4.2e-07 58.9 205 36.6
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 9.4e-07 57.8 114 37.7
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 9.4e-07 57.8 114 37.7
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 1.2e-06 57.4 170 36.5
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 1.6e-06 57.0 149 39.6


User provided reference genes

Program Settings