Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001739 Daucus carota HOM05D026127 ORTHO05D029209 3.4e-77 291.6 148 100.0
DCAR_021946 Daucus carota HOM05D001896 ORTHO05D001862 7.1e-14 81.3 141 40.4
Dinv42246 Davidia involucrata HOM05D001896 ORTHO05D001862 2.1e-13 79.7 143 39.2
Dinv16071 Davidia involucrata HOM05D001896 ORTHO05D001862 1.0e-12 77.4 141 39.0
Ciclev10030063m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.1e-11 73.9 134 38.8
CiPaw.05G020300 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.4e-09 67.0 134 37.3
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 1.8e-09 66.6 133 31.6
Atru.chr5.2308 Acer truncatum HOM05D001896 ORTHO05D001862 6.8e-09 64.7 141 34.8
Ciclev10029922m.g Citrus clementina HOM05D001896 ORTHO05D001862 6.8e-09 64.7 121 38.0
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 2.0e-08 63.2 132 31.1
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 2.6e-08 62.8 128 40.6
PGR142G1913 Punica granatum HOM05D001896 ORTHO05D001862 4.4e-08 62.0 133 32.3
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 9.9e-08 60.8 134 38.8
Gohir.D12G019300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 9.9e-08 60.8 143 35.0
Gorai.008G019600 Gossypium raimondii HOM05D001896 ORTHO05D001862 9.9e-08 60.8 143 35.0
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.3e-07 60.5 140 31.4
Manes.07G053000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.7e-07 60.1 125 32.8
Manes.10G086100 Manihot esculenta HOM05D001896 ORTHO05D001862 1.7e-07 60.1 138 33.3
PGSC0003DMG400044830 Solanum tuberosum HOM05D001896 ORTHO05D001862 2.2e-07 59.7 135 32.6
Potri.009G086000 Populus trichocarpa HOM05D001896 ORTHO05D001862 3.8e-07 58.9 136 32.4
Oeu021357.1 Olea europaea HOM05D026127 ORTHO05D029209 6.4e-07 58.2 139 33.1
CSS0026617 Camellia sinensis var. sinensis HOM05D001896 ORTHO05D001862 8.4e-07 57.8 138 31.2
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 1.1e-06 57.4 135 37.0
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 1.1e-06 57.4 134 36.6
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.4e-06 57.0 133 32.3
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 1.4e-06 57.0 143 35.0
Potri.001G290400 Populus trichocarpa HOM05D001896 ORTHO05D001862 2.4e-06 56.2 135 31.9
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 3.2e-06 55.8 139 35.3
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 3.2e-06 55.8 131 35.1
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 5.4e-06 55.1 138 31.9
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 9.2e-06 54.3 142 31.7
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 9.2e-06 54.3 133 33.8
Oeu010455.1 Olea europaea HOM05D026127 ORTHO05D029209 9.2e-06 54.3 114 35.1
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 9.2e-06 54.3 141 33.3


User provided reference genes

Program Settings