Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 2.2e-171 605.5 301 100.0
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.2e-105 387.1 251 73.3
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 3.6e-105 385.6 249 73.1
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 3.6e-105 385.6 276 69.9
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 3.9e-104 382.1 273 69.2
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 5.7e-103 378.3 257 72.0
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 5.7e-103 378.3 252 72.6
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 9.7e-103 377.5 271 67.5
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 2.2e-102 376.3 283 67.1
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 3.7e-102 375.6 251 70.9
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 8.2e-102 374.4 252 71.8
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.8e-101 373.2 251 68.5
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 6.9e-101 371.3 256 71.1
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.5e-100 370.2 301 64.1
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.5e-100 370.2 256 71.5
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 4.5e-100 368.6 251 67.7
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 5.9e-100 368.2 247 71.3
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.0e-99 367.5 295 62.4
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.3e-99 367.1 248 71.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 1.3e-99 367.1 249 70.3
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 3.8e-99 365.5 271 68.3
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 5.0e-99 365.2 297 63.6
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.4e-98 363.6 231 75.3
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.9e-98 363.2 249 68.3
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 3.2e-98 362.5 256 70.3
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 5.5e-98 361.7 292 64.4
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 1.2e-97 360.5 249 67.9
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 1.2e-97 360.5 304 61.8
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 2.1e-97 359.8 257 69.6
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 2.1e-97 359.8 249 69.5
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 2.7e-97 359.4 294 61.9
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 6.1e-97 358.2 295 63.1
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 3.0e-96 355.9 250 68.4
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 3.9e-96 355.5 272 64.7
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 3.9e-96 355.5 258 66.7
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 8.8e-96 354.4 247 68.8
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 8.8e-96 354.4 249 67.9
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 8.8e-96 354.4 252 66.7
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.0e-95 353.2 312 58.3
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.6e-95 352.8 295 61.0
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 3.3e-95 352.4 250 68.0
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 1.7e-94 350.1 324 57.1
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 2.8e-94 349.4 251 66.9
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 6.3e-94 348.2 278 64.0
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 8.2e-94 347.8 229 74.2
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 8.2e-94 347.8 252 67.1
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 3.1e-93 345.9 279 62.4
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 4.1e-93 345.5 252 63.1
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 4.1e-93 345.5 318 56.9
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 5.3e-93 345.1 250 67.6
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 5.3e-93 345.1 280 62.5
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 9.1e-93 344.4 252 63.1
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.2e-92 344.0 293 61.8
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 2.6e-92 342.8 323 55.4
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.9e-92 341.7 228 71.1
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.0e-91 340.9 278 64.4
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 1.0e-91 340.9 229 70.7
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.7e-91 340.1 277 62.1
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 2.2e-91 339.7 288 60.4
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 2.9e-91 339.3 228 71.5
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.8e-91 339.0 301 59.5
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 8.5e-91 337.8 282 59.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.5e-90 337.0 284 62.0
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 9.4e-90 334.3 268 60.8
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 6.1e-89 331.6 247 63.2
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.8e-88 330.1 254 61.4
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 2.3e-88 329.7 228 68.9
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 5.2e-88 328.6 251 62.5
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 8.8e-88 327.8 277 58.8
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 8.8e-88 327.8 228 68.0
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.2e-87 327.4 280 58.6
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.2e-87 327.4 280 58.6
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 3.3e-87 325.9 246 62.6
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 4.4e-87 325.5 253 60.5
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 1.8e-85 320.1 293 56.7
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.2e-84 317.4 265 58.9
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.3e-83 313.9 294 56.5
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.9e-83 312.8 294 56.1
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 3.8e-83 312.4 235 62.1
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 1.1e-82 310.8 257 61.5
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 2.5e-82 309.7 268 57.5
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.1e-81 305.1 203 71.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 8.0e-81 304.7 217 72.4
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 8.0e-81 304.7 247 57.1
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 3.1e-77 292.7 217 63.1
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.5e-76 289.3 205 71.7
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 3.3e-74 282.7 204 66.7
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 3.3e-74 282.7 202 67.8
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 1.6e-73 280.4 204 64.7
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.8e-73 279.6 249 55.0
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 8.0e-73 278.1 261 59.0
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 3.1e-69 266.2 250 52.4
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 5.0e-67 258.8 253 51.8
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.1e-66 257.7 183 68.3
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 3.6e-65 252.7 245 52.2
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 6.8e-64 248.4 217 61.3
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 2.9e-62 243.0 168 66.7
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 1.4e-61 240.7 249 50.2
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 2.4e-61 240.0 252 48.8
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 5.0e-59 232.3 164 68.3
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.7e-54 217.2 224 52.7
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 3.7e-46 189.5 127 70.9
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.1e-44 183.7 251 42.2
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 6.6e-43 178.7 184 57.6
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 9.6e-34 148.3 103 70.9
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.7e-30 137.5 191 40.8
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 3.6e-25 119.8 300 32.3
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 9.0e-24 115.2 98 62.2
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.2e-22 110.5 98 55.1
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 1.9e-21 107.5 345 28.4
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.2e-15 88.2 103 50.5
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 1.5e-15 87.8 102 51.0
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 2.3e-11 73.9 49 69.4
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 2.0e-07 60.8 49 55.1
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 3.4e-07 60.1 49 53.1
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 3.4e-07 60.1 49 53.1
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 3.4e-07 60.1 49 53.1
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 7.6e-07 58.9 39 64.1


User provided reference genes

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