Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001719 Daucus carota HOM05D001581 ORTHO05D001479 7.7e-42 173.3 83 100.0
DCAR_027016 Daucus carota HOM05D001581 ORTHO05D001479 1.1e-29 132.9 65 95.4
CSS0024205 Camellia sinensis var. sinensis HOM05D001581 ORTHO05D001479 2.6e-21 105.1 59 81.4
Gorai.011G198100 Gossypium raimondii HOM05D001581 ORTHO05D001479 1.3e-20 102.8 60 75.0
Dinv44312 Davidia involucrata HOM05D001581 ORTHO05D001479 1.7e-20 102.4 92 55.4
Gohir.D10G177300 Gossypium hirsutum HOM05D001581 ORTHO05D001479 2.2e-20 102.1 59 78.0
Gohir.A10G170300 Gossypium hirsutum HOM05D001581 ORTHO05D001479 3.7e-20 101.3 59 76.3
MD13G1157500 Malus domestica HOM05D001581 ORTHO05D001479 3.7e-20 101.3 87 57.5
Manes.15G006400 Manihot esculenta HOM05D001581 ORTHO05D001479 6.3e-20 100.5 55 81.8
Actinidia15587 Actinidia chinensis HOM05D001581 ORTHO05D001479 8.2e-20 100.1 96 53.1
CiPaw.01G141600 Carya illinoinensis HOM05D001581 ORTHO05D001479 8.2e-20 100.1 96 54.2
Duzib151G1178 Durio zibethinus HOM05D001581 ORTHO05D001479 8.2e-20 100.1 57 78.9
MD16G1158400 Malus domestica HOM05D001581 ORTHO05D001479 8.2e-20 100.1 86 57.0
Nitab4.5_0000570g0370 Nicotiana tabacum HOM05D001581 ORTHO05D001479 8.2e-20 100.1 70 67.1
arahy.Tifrunner.gnm1.ann1.T9D4U4 Arachis hypogaea HOM05D001581 ORTHO05D001479 1.1e-19 99.8 69 69.6
Thecc.04G296200 Theobroma cacao HOM05D001581 ORTHO05D001479 1.1e-19 99.8 91 54.9
Dinv15200 Davidia involucrata HOM05D001581 ORTHO05D001479 1.4e-19 99.4 60 78.3
GSVIVG01035034001 Vitis vinifera HOM05D001581 ORTHO05D001479 1.4e-19 99.4 60 71.7
Duzib212G0234 Durio zibethinus HOM05D001581 ORTHO05D001479 1.8e-19 99.0 57 77.2
FAN07G2509 Fragaria x ananassa HOM05D001581 ORTHO05D001479 2.4e-19 98.6 61 72.1
Gohir.D09G063950 Gossypium hirsutum HOM05D001581 ORTHO05D001479 2.4e-19 98.6 60 73.3
Nitab4.5_0003484g0100 Nicotiana tabacum HOM05D001581 ORTHO05D001479 3.1e-19 98.2 67 67.2
Prupe.1G123200 Prunus persica HOM05D001581 ORTHO05D001479 3.1e-19 98.2 88 55.7
QL06p011496 Quercus lobata HOM05D001581 ORTHO05D001479 3.1e-19 98.2 59 72.9
QL12p005383 Quercus lobata HOM05D001581 ORTHO05D001479 3.1e-19 98.2 59 72.9
MSTRG.3867 Avicennia marina HOM05D001581 ORTHO05D001479 7.0e-19 97.1 54 81.5
Hma1.2p1_0013F.1_g008870 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 9.1e-19 96.7 57 77.2
TWI09G1623 Tripterygium wilfordii HOM05D001581 ORTHO05D001479 9.1e-19 96.7 65 70.8
RcHm_v2.0_Chr4g0424361 Rosa chinensis HOM05D001581 ORTHO05D001479 1.2e-18 96.3 58 75.9
Potri.008G108201 Populus trichocarpa HOM05D001581 ORTHO05D001479 2.0e-18 95.5 55 78.2
Actinidia40352 Actinidia chinensis HOM05D001581 ORTHO05D001479 2.7e-18 95.1 93 54.8
COL.COLO4_34659 Corchorus olitorius HOM05D001581 ORTHO05D001479 3.5e-18 94.7 61 77.0
Glyma.07G242300 Glycine max HOM05D001581 ORTHO05D001479 3.5e-18 94.7 60 66.7
Lalb_Chr18g0058891 Lupinus albus HOM05D001581 ORTHO05D001479 3.5e-18 94.7 55 76.4
Sabra08G0082000 Salix brachista HOM05D001581 ORTHO05D001479 3.5e-18 94.7 55 76.4
Oeu019955.1 Olea europaea HOM05D001581 ORTHO05D001479 4.5e-18 94.4 53 79.2
Phvul.009G254200 Phaseolus vulgaris HOM05D001581 ORTHO05D001479 4.5e-18 94.4 55 76.4
FvH4_4g19340 Fragaria vesca HOM05D001581 ORTHO05D001479 5.9e-18 94.0 54 74.1
PGR031G1314 Punica granatum HOM05D001581 ORTHO05D001479 5.9e-18 94.0 61 70.5
Sopen01g026400 Solanum pennellii HOM05D001581 ORTHO05D001479 5.9e-18 94.0 54 79.6
PGSC0003DMG400007552 Solanum tuberosum HOM05D001581 ORTHO05D001479 5.9e-18 94.0 54 79.6
CiPaw.02G076400 Carya illinoinensis HOM05D001581 ORTHO05D001479 7.7e-18 93.6 54 75.9
Potri.010G141300 Populus trichocarpa HOM05D001581 ORTHO05D001479 1.0e-17 93.2 55 76.4
Sabra10G0109200 Salix brachista HOM05D001581 ORTHO05D001479 1.0e-17 93.2 55 76.4
Glyma.15G143800 Glycine max HOM05D001581 ORTHO05D001479 1.3e-17 92.8 55 74.5
Lj6g0022191 Lotus japonicus HOM05D001581 ORTHO05D001479 1.3e-17 92.8 55 74.5
TWI73G1141 Tripterygium wilfordii HOM05D001581 ORTHO05D001479 1.7e-17 92.4 56 76.8
Medtr2g034750 Medicago truncatula HOM05D001581 ORTHO05D001479 2.9e-17 91.7 55 72.7
Psat1g159920 Pisum sativum HOM05D001581 ORTHO05D001479 2.9e-17 91.7 55 72.7
TPR.G40120 Trifolium pratense HOM05D001581 ORTHO05D001479 3.8e-17 91.3 55 72.7
TAR362G1265 Trochodendron aralioides HOM05D001581 ORTHO05D001479 5.0e-17 90.9 57 70.2
arahy.Tifrunner.gnm1.ann1.Z7UQGQ Arachis hypogaea HOM05D001581 ORTHO05D001479 6.5e-17 90.5 56 71.4
HanXRQChr02g0049781 Helianthus annuus HOM05D001581 ORTHO05D001479 6.5e-17 90.5 55 72.7
Peaxi162Scf00065g00214 Petunia axillaris HOM05D001581 ORTHO05D001479 8.5e-17 90.1 54 75.9
BcaC07g37954 Brassica carinata HOM05D001581 ORTHO05D001479 1.1e-16 89.7 63 65.1
Duzib052G0583 Durio zibethinus HOM05D001581 ORTHO05D001479 1.1e-16 89.7 58 74.1
ECA233G1761 Erigeron canadensis HOM05D002444 ORTHO05D004748 1.1e-16 89.7 57 70.2
Lsat_1_v5_gn_6_19140 Lactuca sativa HOM05D001581 ORTHO05D001479 1.1e-16 89.7 57 70.2
Ciclev10006302m.g Citrus clementina HOM05D001581 ORTHO05D001479 1.5e-16 89.4 57 73.7
Glyma.09G038700 Glycine max HOM05D001581 ORTHO05D001479 1.5e-16 89.4 58 72.4
Cc03_g01090 Coffea canephora HOM05D001581 ORTHO05D001479 1.9e-16 89.0 56 73.2
Hund03100 Selenicereus undatus HOM05D001581 ORTHO05D001479 1.9e-16 89.0 60 66.7
Atru.chr4.2970 Acer truncatum HOM05D001581 ORTHO05D001479 2.5e-16 88.6 54 74.1
Hma1.2p1_0078F.1_g040130 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 2.5e-16 88.6 58 72.4
Lalb_Chr20g0120961 Lupinus albus HOM05D001581 ORTHO05D001479 3.2e-16 88.2 55 69.1
CANSAT78G0149 Cannabis sativa HOM05D001581 ORTHO05D001479 4.2e-16 87.8 60 68.3
Sp7g14640 Schrenkiella parvula HOM05D001581 ORTHO05D001479 4.2e-16 87.8 63 63.5
AUR62043775 Chenopodium quinoa HOM05D001581 ORTHO05D001479 5.5e-16 87.4 55 72.7
Sed0017903 Sechium edule HOM05D001581 ORTHO05D001479 5.5e-16 87.4 61 68.9
Sc25g0003430 Simmondsia chinensis HOM05D001581 ORTHO05D001479 5.5e-16 87.4 57 70.2
Thhalv10026514m.g Eutrema salsugineum HOM05D001581 ORTHO05D001479 7.2e-16 87.0 63 61.9
Oeu016481.1 Olea europaea HOM05D001581 ORTHO05D001479 9.4e-16 86.7 53 75.5
Sed0001632 Sechium edule HOM05D001581 ORTHO05D001479 9.4e-16 86.7 60 65.0
Nn4g25630 Nelumbo nucifera HOM05D001581 ORTHO05D001479 1.6e-15 85.9 59 66.1
THA.LOC104802598 Tarenaya hassleriana HOM05D001581 ORTHO05D001479 1.6e-15 85.9 59 64.4
BolC8t48337H Brassica oleracea HOM05D001581 ORTHO05D001479 3.6e-15 84.7 60 63.3
CsaV3_6G022500 Cucumis sativus L. HOM05D001581 ORTHO05D001479 3.6e-15 84.7 60 61.7
Carub.0007s2543 Capsella rubella HOM05D001581 ORTHO05D001479 4.7e-15 84.3 63 60.3
MELO3C021282.2 Cucumis melo HOM05D001581 ORTHO05D001479 4.7e-15 84.3 60 63.3
Eucgr.A00201 Eucalyptus grandis HOM05D001581 ORTHO05D001479 6.1e-15 84.0 58 67.2
PSO761G0624 Papaver somniferum HOM05D001581 ORTHO05D001479 1.4e-14 82.8 60 60.0
unitig_32.g11856 Utricularia gibba HOM05D001581 ORTHO05D001479 2.3e-14 82.0 63 65.1
Aqoxy2G02785 Aquilegia oxysepala HOM05D001581 ORTHO05D001479 4.0e-14 81.3 58 67.2
AL7G38990 Arabidopsis lyrata HOM05D001581 ORTHO05D001479 1.2e-13 79.7 63 57.1
CsaV3_3G015060 Cucumis sativus L. HOM05D001581 ORTHO05D001479 1.5e-13 79.3 61 62.3
AT4G16146 Arabidopsis thaliana HOM05D001581 ORTHO05D001479 2.6e-13 78.6 63 57.1
DCAR_002503 Daucus carota HOM05D001581 ORTHO05D001479 5.7e-13 77.4 57 64.9
Nn3g21655 Nelumbo nucifera HOM05D001581 ORTHO05D001479 5.7e-13 77.4 57 63.2
Aa31LG10G5990 Aethionema arabicum HOM05D001581 ORTHO05D001479 7.5e-13 77.0 63 58.7
CARHR222500 Cardamine hirsuta HOM05D001581 ORTHO05D001479 9.8e-13 76.6 63 55.6
Nitab4.5_0000169g0090 Nicotiana tabacum HOM05D001581 ORTHO05D001479 1.4e-11 72.8 44 72.7
Os03g0304800 Oryza sativa ssp. japonica HOM05D001581 ORTHO05D001479 1.8e-11 72.4 54 61.1
BcaC06g32990 Brassica carinata HOM05D001581 ORTHO05D001479 3.1e-11 71.6 57 57.9
ATR0706G259 Amborella trichopoda HOM05D001581 ORTHO05D001479 5.4e-11 70.9 55 63.6
BcaC06g32989 Brassica carinata HOM05D001581 ORTHO05D001479 1.2e-10 69.7 60 55.0
Os01g0305200 Oryza sativa ssp. japonica HOM05D001581 ORTHO05D001479 1.6e-10 69.3 56 60.7
C07p47670 Brassica napus HOM05D000768 ORTHO05D000665 2.0e-10 68.9 57 56.1
BolC7t45293H Brassica oleracea HOM05D001581 ORTHO05D001479 2.0e-10 68.9 57 56.1
BraA03t14060Z Brassica rapa HOM05D001581 ORTHO05D001479 2.0e-10 68.9 57 56.1
A03p49610 Brassica napus HOM05D000768 ORTHO05D000665 3.5e-10 68.2 57 56.1
Zm00001eb331360 Zea mays HOM05D001581 ORTHO05D001479 7.7e-10 67.0 55 58.2
Os12g0433700 Oryza sativa ssp. japonica HOM05D001581 ORTHO05D001479 1.0e-09 66.6 51 62.7
SalBow8G0256 Salvia bowleyana HOM05D001581 ORTHO05D001479 1.1e-08 63.2 38 71.1
SalBow8G2119 Salvia bowleyana HOM05D001581 ORTHO05D001479 1.1e-08 63.2 38 71.1
AagrBONN_evm.TU.Sc2ySwM_117.2436 Anthoceros agrestis HOM05D001581 ORTHO05D001479 1.9e-08 62.4 50 68.0
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 2.5e-08 62.0 64 53.1
FAN12G0232 Fragaria x ananassa HOM05D001581 ORTHO05D001479 2.5e-08 62.0 38 68.4
FAN12G3576 Fragaria x ananassa HOM05D001581 ORTHO05D001479 2.5e-08 62.0 38 68.4
SEGI_23278 Sequoiadendron giganteum HOM05D001581 ORTHO05D001479 3.2e-08 61.6 65 53.8
Zm00001eb340190 Zea mays HOM05D001581 ORTHO05D001479 3.2e-08 61.6 57 54.4
Haze_01076 Corylus avellana HOM05D001581 ORTHO05D001479 4.2e-08 61.2 37 73.0
MELO3C012112.2 Cucumis melo HOM05D001581 ORTHO05D001479 7.2e-08 60.5 69 50.7
Hma1.2p1_0357F.1_g134130 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 7.2e-08 60.5 65 50.8
CsaV3_5G032910 Cucumis sativus L. HOM05D001581 ORTHO05D001479 9.4e-08 60.1 65 53.8
MD16G1070200 Malus domestica HOM05D001581 ORTHO05D001479 9.4e-08 60.1 58 58.6
Mapoly0025s0018 Marchantia polymorpha HOM05D001581 ORTHO05D001479 9.4e-08 60.1 50 58.0
Mapoly0191s0012 Marchantia polymorpha HOM05D001581 ORTHO05D001479 1.2e-07 59.7 53 62.3
ATR0807G109 Amborella trichopoda HOM05D001581 ORTHO05D001479 1.6e-07 59.3 51 58.8
BcaB03g14712 Brassica carinata HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
BcaC08g46385 Brassica carinata HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
A07p35810 Brassica napus HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
C06p40390 Brassica napus HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
BolC6t39393H Brassica oleracea HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
BraA07t31167Z Brassica rapa HOM05D001581 ORTHO05D001479 2.7e-07 58.5 55 61.8
Thhalv10019298m.g Eutrema salsugineum HOM05D001581 ORTHO05D001479 2.7e-07 58.5 64 53.1
GSVIVG01019957001 Vitis vinifera HOM05D001581 ORTHO05D001479 2.7e-07 58.5 58 56.9
ATR0618G282 Amborella trichopoda HOM05D001581 ORTHO05D001479 3.6e-07 58.2 49 59.2
AL2G28630 Arabidopsis lyrata HOM05D001581 ORTHO05D001479 3.6e-07 58.2 55 61.8
Carub.0002s1613 Capsella rubella HOM05D001581 ORTHO05D001479 3.6e-07 58.2 55 61.8
Cfa008962 Carpinus fangiana HOM05D001581 ORTHO05D001479 3.6e-07 58.2 58 55.2
CiPaw.05G132600 Carya illinoinensis HOM05D001581 ORTHO05D001479 3.6e-07 58.2 58 55.2
Haze_11991 Corylus avellana HOM05D001581 ORTHO05D001479 3.6e-07 58.2 58 55.2
MD13G1069900 Malus domestica HOM05D001581 ORTHO05D001479 3.6e-07 58.2 58 56.9
MBI03_g20846_MAGBIO Magnolia biondii HOM05D001581 ORTHO05D001479 4.7e-07 57.8 65 50.8
CSS0014060 Camellia sinensis var. sinensis HOM05D001581 ORTHO05D001479 6.1e-07 57.4 64 48.4
CSS0029280 Camellia sinensis var. sinensis HOM05D001581 ORTHO05D001479 6.1e-07 57.4 64 48.4
Nn4g23217 Nelumbo nucifera HOM05D001581 ORTHO05D001479 6.1e-07 57.4 64 51.6
Sp5g24590 Schrenkiella parvula HOM05D001581 ORTHO05D001479 6.1e-07 57.4 55 60.0
MBI06_g27449_MAGBIO Magnolia biondii HOM05D001581 ORTHO05D001479 8.0e-07 57.0 60 56.7
Sed0009090 Sechium edule HOM05D001581 ORTHO05D001479 8.0e-07 57.0 49 59.2
Ciclev10032906m.g Citrus clementina HOM05D001581 ORTHO05D001479 1.0e-06 56.6 57 54.4
PSO017G1156 Papaver somniferum HOM05D001581 ORTHO05D001479 1.0e-06 56.6 64 50.0
PSO478G4205 Papaver somniferum HOM05D001581 ORTHO05D001479 1.0e-06 56.6 64 50.0
QL03p068214 Quercus lobata HOM05D001581 ORTHO05D001479 1.0e-06 56.6 58 53.4
Hund05870 Selenicereus undatus HOM05D001581 ORTHO05D001479 1.0e-06 56.6 72 47.2
Thecc.02G343200 Theobroma cacao HOM05D001581 ORTHO05D001479 1.0e-06 56.6 69 50.7
Nitab4.5_0000040g0100 Nicotiana tabacum HOM05D001581 ORTHO05D001479 1.4e-06 56.2 67 52.2
Oeu055106.1 Olea europaea HOM05D001581 ORTHO05D001479 1.4e-06 56.2 58 53.4
Aqoxy3G03439 Aquilegia oxysepala HOM05D001581 ORTHO05D001479 1.8e-06 55.8 51 58.8
Eucgr.B03210 Eucalyptus grandis HOM05D001581 ORTHO05D001479 1.8e-06 55.8 58 55.2
AT1G69510 Arabidopsis thaliana HOM05D001581 ORTHO05D001479 3.0e-06 55.1 55 60.0
Gohir.D04G191300 Gossypium hirsutum HOM05D001581 ORTHO05D001479 3.0e-06 55.1 57 50.9
Nitab4.5_0004300g0190 Nicotiana tabacum HOM05D001581 ORTHO05D001479 3.0e-06 55.1 64 53.1
MBI10_g35798_MAGBIO Magnolia biondii HOM05D001581 ORTHO05D001479 4.0e-06 54.7 60 55.0
PSO675G3700 Papaver somniferum HOM05D001581 ORTHO05D001479 4.0e-06 54.7 71 46.5
Atru.chr11.1758 Acer truncatum HOM05D001581 ORTHO05D001479 5.2e-06 54.3 51 56.9
HanXRQChr08g0210781 Helianthus annuus HOM05D001581 ORTHO05D001479 5.2e-06 54.3 64 46.9
Peaxi162Scf00222g00064 Petunia axillaris HOM05D001581 ORTHO05D001479 5.2e-06 54.3 53 58.5
Prupe.1G277000 Prunus persica HOM05D001581 ORTHO05D001479 5.2e-06 54.3 58 53.4
TWI31G0636 Tripterygium wilfordii HOM05D001581 ORTHO05D001479 5.2e-06 54.3 59 54.2
THA.LOC104822046 Tarenaya hassleriana HOM05D001581 ORTHO05D001479 6.8e-06 53.9 56 60.7
Aa31LG4G11280 Aethionema arabicum HOM05D001581 ORTHO05D001479 8.8e-06 53.5 59 55.9
EL10Ac6g13238 Beta vulgaris HOM05D001581 ORTHO05D001479 8.8e-06 53.5 51 58.8


User provided reference genes

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