Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.3e-183 646.4 337 100.0
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 3.6e-74 282.7 337 51.0
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.9e-70 270.4 340 51.2
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 8.7e-68 261.5 350 48.9
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.9e-67 260.4 341 49.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 3.6e-66 256.1 341 48.4
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 3.1e-65 253.1 340 48.5
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 5.3e-65 252.3 349 49.6
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 6.9e-65 251.9 349 49.6
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.5e-64 250.8 349 49.3
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.4e-64 249.6 341 46.9
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 5.8e-64 248.8 340 49.4
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.1e-62 244.6 341 48.7
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 5.5e-62 242.3 363 46.6
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 1.2e-61 241.1 343 47.5
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.7e-61 240.0 339 47.2
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 4.6e-61 239.2 344 47.1
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 2.5e-59 233.4 341 46.6
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 9.6e-59 231.5 342 47.4
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.3e-58 231.1 344 47.4
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.6e-58 230.7 343 44.6
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.8e-58 229.9 354 45.2
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.3e-57 225.7 341 45.5
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 7.6e-56 221.9 350 43.7
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.0e-55 221.5 335 44.8
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.0e-55 221.5 335 44.8
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.3e-55 221.1 344 46.2
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 3.8e-55 219.5 317 46.7
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.8e-55 219.5 315 46.7
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 4.9e-55 219.2 350 43.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 2.5e-54 216.9 344 45.9
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 3.2e-54 216.5 352 46.0
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.2e-54 216.1 320 45.6
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 5.5e-54 215.7 340 45.3
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.2e-53 214.5 345 43.5
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 3.5e-53 213.0 345 43.2
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 4.6e-53 212.6 346 45.1
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.6e-53 212.6 334 43.7
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.3e-52 211.1 347 43.5
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.3e-52 210.3 333 43.2
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 2.5e-51 206.8 348 41.7
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 3.3e-51 206.5 349 43.3
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 6.3e-50 202.2 336 43.5
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.8e-49 200.7 341 42.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 6.9e-49 198.7 376 38.8
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.2e-47 193.7 315 43.5
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.1e-46 191.4 343 41.4
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.9e-46 190.7 332 40.7
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.9e-46 190.7 399 38.8
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 4.2e-46 189.5 321 41.4
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.3e-44 184.5 317 40.4
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 4.3e-43 179.5 341 41.9
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 1.4e-41 174.5 347 41.2
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.4e-41 174.5 329 42.2
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 4.1e-41 172.9 370 37.6
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.9e-39 166.8 350 39.7
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.1e-38 164.9 346 39.3
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.2e-38 162.9 329 41.3
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 7.2e-38 162.2 326 37.7
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.2e-37 161.4 250 43.2
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 4.6e-37 159.5 344 37.2
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.0e-36 156.8 309 40.1
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 3.0e-36 156.8 409 35.2
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.9e-36 156.4 344 37.5
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 5.1e-36 156.0 337 39.2
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.5e-35 154.5 335 39.4
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 3.8e-31 139.8 318 36.2
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 5.0e-31 139.4 338 36.1
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 2.5e-30 137.1 350 34.0
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 5.5e-30 136.0 284 41.2
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 5.5e-30 136.0 333 36.0
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 9.4e-30 135.2 353 38.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 3.6e-29 133.3 343 35.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.3e-28 130.6 344 35.2
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.0e-28 130.2 333 34.5
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 6.7e-28 129.0 333 35.7
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 6.7e-28 129.0 335 34.9
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 8.8e-28 128.6 288 36.1
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.1e-27 128.3 354 34.5
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.0e-27 127.5 330 34.5
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 4.4e-27 126.3 350 36.9
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 4.4e-27 126.3 176 44.9
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.7e-26 124.4 339 35.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 3.7e-26 123.2 355 33.8
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 6.3e-26 122.5 338 37.9
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 8.2e-26 122.1 345 39.1
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.1e-25 121.7 211 42.2
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 4.1e-25 119.8 229 39.3
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 9.1e-25 118.6 317 35.3
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 5.9e-24 115.9 295 37.6
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.2e-23 114.0 334 33.8
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.5e-22 111.3 312 34.0
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 2.5e-22 110.5 341 37.0
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 3.2e-22 110.2 337 36.2
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 4.2e-22 109.8 342 34.8
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 9.4e-22 108.6 336 33.6
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 2.1e-21 107.5 335 32.8
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 8.0e-21 105.5 180 42.2
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 8.0e-21 105.5 340 34.4
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.0e-20 103.6 154 43.5
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 7.5e-19 99.0 264 33.7
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 9.7e-19 98.6 349 34.4
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 1.7e-18 97.8 201 36.8
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.7e-18 97.8 339 33.3
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 3.7e-18 96.7 329 32.8
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.1e-17 93.2 239 35.6
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 4.1e-17 93.2 346 31.2
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 5.3e-17 92.8 237 35.9
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 5.0e-15 86.3 205 34.6
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.5e-14 84.0 180 38.9
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 9.4e-14 82.0 329 30.4
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 1.6e-13 81.3 117 46.2
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 2.1e-13 80.9 344 31.4
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 4.7e-13 79.7 241 33.6
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.4e-12 78.2 72 61.1
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 7.5e-11 72.4 257 33.5
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 1.8e-09 67.8 330 30.6
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.7e-08 63.9 212 33.5
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 2.9e-07 60.5 224 29.5
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 2.9e-07 60.5 244 30.3
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 1.1e-06 58.5 95 43.2
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 3.2e-06 57.0 45 73.3


User provided reference genes

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