Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 9.7e-71 270.0 134 100.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.7e-51 206.1 133 72.9
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 5.0e-51 204.5 134 71.6
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.5e-50 203.0 133 71.4
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.5e-50 203.0 133 71.4
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.5e-50 203.0 133 71.4
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.5e-50 202.2 133 71.4
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 7.2e-50 200.7 131 72.5
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 8.0e-49 197.2 133 69.9
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 8.0e-49 197.2 127 71.7
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 69.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 69.2
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 6.8e-48 194.1 133 66.9
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 8.8e-48 193.7 133 66.9
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 8.8e-48 193.7 128 71.9
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.5e-47 193.0 133 66.2
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 2.0e-47 192.6 128 70.3
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 66.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 3.4e-47 191.8 133 66.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 4.4e-47 191.4 133 67.7
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 4.4e-47 191.4 133 66.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 4.4e-47 191.4 133 69.9
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 4.4e-47 191.4 128 69.5
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 4.4e-47 191.4 133 67.7
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 7.5e-47 190.7 128 68.8
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 9.8e-47 190.3 133 66.2
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 66.9
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.3e-46 189.9 134 66.4
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 67.7
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.2e-46 189.1 133 65.4
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 2.8e-46 188.7 133 65.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 3.7e-46 188.3 128 70.3
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 3.7e-46 188.3 133 67.7
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 3.7e-46 188.3 133 66.2
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 4.9e-46 188.0 133 65.4
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 4.9e-46 188.0 133 66.2
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 8.3e-46 187.2 127 69.3
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.1e-45 186.8 133 66.2
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.8e-45 186.0 133 64.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.4e-45 185.7 129 69.8
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 2.0e-44 182.6 140 63.6
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.0e-44 182.6 133 64.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 5.9e-44 181.0 139 64.0
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 7.7e-44 180.6 133 63.2
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.0e-43 180.3 133 62.4
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 1.3e-43 179.9 133 62.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 2.9e-43 178.7 133 62.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.9e-42 176.0 133 61.7
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 3.3e-42 175.3 116 70.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 4.2e-42 174.9 133 61.7
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 7.2e-42 174.1 118 67.8
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 9.5e-42 173.7 133 61.7
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.6e-41 172.9 133 60.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 2.1e-41 172.6 133 62.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 2.8e-41 172.2 133 61.7
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 6.1e-41 171.0 133 60.9
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 8.0e-41 170.6 133 61.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 8.0e-41 170.6 115 70.4
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 8.0e-41 170.6 126 61.1
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 8.0e-41 170.6 113 69.9
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.0e-40 170.2 133 61.7
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.4e-40 169.9 130 61.5
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 5.2e-40 167.9 133 60.2
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.2e-40 167.9 133 59.4
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.5e-39 166.4 133 59.4
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.5e-39 166.4 127 60.6
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.0e-39 166.0 128 58.6
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 2.0e-39 166.0 181 49.2
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 4.4e-39 164.9 176 48.9
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.9e-38 162.2 137 58.4
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 6.4e-38 161.0 128 59.4
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 8.3e-38 160.6 124 65.3
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.0e-36 156.0 123 59.3
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 5.9e-36 154.5 105 66.7
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.7e-35 152.9 114 63.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.1e-34 150.2 105 65.7
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.1e-34 150.2 98 72.4
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.5e-34 149.8 110 62.7
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 2.8e-33 145.6 101 63.4
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 8.0e-33 144.1 92 70.7
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.8e-32 142.9 105 61.9
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 3.1e-32 142.1 101 64.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.2e-31 140.2 127 51.2
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.6e-31 139.0 98 65.3
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 6.4e-30 134.4 93 66.7
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.9e-26 122.9 133 51.9
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 1.2e-25 120.2 128 46.9
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.8e-24 116.3 105 49.5
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 2.3e-24 115.9 133 49.6
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.0e-23 112.8 111 48.6
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.9e-21 106.3 70 70.0
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 4.1e-21 105.1 102 46.1
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.5e-18 96.7 111 43.2
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.2e-17 93.6 134 35.8
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 1.5e-15 86.7 104 43.3
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 9.9e-15 84.0 65 61.5
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.1e-12 76.3 67 56.7
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.2e-09 67.0 70 45.7
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.4e-08 63.5 47 57.4
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 1.8e-08 63.2 70 42.9
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 9.9e-07 57.4 89 31.5


User provided reference genes

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