Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001652 Daucus carota HOM05D003735 ORTHO05D004550 8.4e-210 733.4 364 100.0
Actinidia00406 Actinidia chinensis HOM05D003735 ORTHO05D004550 1.4e-156 556.6 417 66.4
CSS0013486 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 3.8e-154 548.5 419 65.9
DCAR_021982 Daucus carota HOM05D003735 ORTHO05D004550 1.5e-153 546.6 419 65.2
Dinv15769 Davidia involucrata HOM05D003735 ORTHO05D004550 1.6e-152 543.1 417 64.3
Potri.009G094800 Populus trichocarpa HOM05D003735 ORTHO05D004550 1.0e-151 540.4 412 65.0
Lj9A323T50 Lonicera japonica HOM05D003735 ORTHO05D004550 1.8e-151 539.7 418 64.4
GSVIVG01037915001 Vitis vinifera HOM05D003735 ORTHO05D004550 5.2e-151 538.1 415 65.1
QL11p033367 Quercus lobata HOM05D003735 ORTHO05D004550 1.2e-150 537.0 413 63.9
Cc02_g19320 Coffea canephora HOM05D003735 ORTHO05D004550 3.4e-150 535.4 415 64.1
Ciclev10028518m.g Citrus clementina HOM05D003735 ORTHO05D004550 5.7e-150 534.6 414 64.7
Dinv42198 Davidia involucrata HOM05D003735 ORTHO05D004550 9.8e-150 533.9 417 63.8
Rhsim11G0159400 Rhododendron simsii HOM05D003735 ORTHO05D004550 1.7e-149 533.1 417 63.3
Rhsim11G0159300 Rhododendron simsii HOM05D003735 ORTHO05D004550 2.8e-149 532.3 417 63.8
Cfa004592 Carpinus fangiana HOM05D003735 ORTHO05D004550 3.7e-149 531.9 417 63.8
GSVIVG01037913001 Vitis vinifera HOM05D003735 ORTHO05D004550 4.9e-149 531.6 415 64.8
arahy.Tifrunner.gnm1.ann1.28YLK9 Arachis hypogaea HOM05D003735 ORTHO05D004550 8.3e-149 530.8 417 62.6
arahy.Tifrunner.gnm1.ann1.SBY3PD Arachis hypogaea HOM05D003735 ORTHO05D004550 8.3e-149 530.8 417 62.6
Glyma.10G261300 Glycine max HOM05D003735 ORTHO05D004550 8.3e-149 530.8 416 62.7
Sabra09G0072900 Salix brachista HOM05D003735 ORTHO05D004550 1.1e-148 530.4 412 64.3
CiPaw.05G012200 Carya illinoinensis HOM05D003735 ORTHO05D004550 1.4e-148 530.0 413 63.0
Potri.001G299700 Populus trichocarpa HOM05D003735 ORTHO05D004550 2.4e-148 529.3 412 64.3
Atru.chr5.2510 Acer truncatum HOM05D003735 ORTHO05D004550 3.1e-148 528.9 412 64.1
Medtr1g107235 Medicago truncatula HOM05D003735 ORTHO05D004550 3.1e-148 528.9 417 62.1
CiPaw.05G012300 Carya illinoinensis HOM05D003735 ORTHO05D004550 4.1e-148 528.5 413 62.5
Prupe.8G136000 Prunus persica HOM05D003735 ORTHO05D004550 9.2e-148 527.3 413 63.4
Sabra09G0073100 Salix brachista HOM05D003735 ORTHO05D004550 1.6e-147 526.6 412 63.8
Manes.07G071100 Manihot esculenta HOM05D003735 ORTHO05D004550 2.0e-147 526.2 411 63.3
SGA_v2.0_scaffold393G50713 Striga asiatica HOM05D003735 ORTHO05D004550 2.7e-147 525.8 419 62.3
Migut.N01162 Erythranthe guttata HOM05D003735 ORTHO05D004550 3.5e-147 525.4 419 62.8
Eucgr.I01098 Eucalyptus grandis HOM05D003735 ORTHO05D004550 3.5e-147 525.4 412 63.1
vmacro01999 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 7.8e-147 524.2 436 61.5
Haze_10183 Corylus avellana HOM05D003735 ORTHO05D004550 1.0e-146 523.9 415 62.2
Glyma.20G129700 Glycine max HOM05D003735 ORTHO05D004550 1.7e-146 523.1 416 62.5
Manes.07G071000 Manihot esculenta HOM05D003735 ORTHO05D004550 1.7e-146 523.1 412 62.9
CSS0002879 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 2.3e-146 522.7 322 77.6
Psat6g217400 Pisum sativum HOM05D003735 ORTHO05D004550 2.9e-146 522.3 416 61.3
Gohir.A12G021500 Gossypium hirsutum HOM05D003735 ORTHO05D004550 5.0e-146 521.5 414 61.8
Phvul.007G040800 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 6.6e-146 521.2 414 61.8
Thecc.02G109200 Theobroma cacao HOM05D003735 ORTHO05D004550 8.6e-146 520.8 411 62.8
MSTRG.5338 Avicennia marina HOM05D003735 ORTHO05D004550 1.1e-145 520.4 414 62.1
Lj5g0001181 Lotus japonicus HOM05D003735 ORTHO05D004550 1.5e-145 520.0 414 61.8
TPR.G3239 Trifolium pratense HOM05D003735 ORTHO05D004550 1.5e-145 520.0 417 60.7
Cpa.g.sc106.101 Carica papaya HOM05D003735 ORTHO05D004550 2.5e-145 519.2 416 61.5
Hma1.2p1_0796F.1_g219280 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 2.5e-145 519.2 417 62.1
Manes.07G071116 Manihot esculenta HOM05D003735 ORTHO05D004550 2.5e-145 519.2 411 62.5
VMungo0720G1863 Vigna mungo HOM05D003735 ORTHO05D004550 2.5e-145 519.2 414 61.6
Duzib132G0856 Durio zibethinus HOM05D003735 ORTHO05D004550 5.6e-145 518.1 434 60.4
Haze_10190 Corylus avellana HOM05D003735 ORTHO05D004550 7.3e-145 517.7 433 60.7
COL.COLO4_32583 Corchorus olitorius HOM05D003735 ORTHO05D004550 1.6e-144 516.5 411 62.8
Lalb_Chr02g0145261 Lupinus albus HOM05D003735 ORTHO05D004550 2.8e-144 515.8 413 61.0
Phvul.007G040700 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 4.7e-144 515.0 414 60.4
CANSAT25G2742 Cannabis sativa HOM05D003735 ORTHO05D004550 6.1e-144 514.6 412 61.4
Ca_11068_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 6.1e-144 514.6 416 60.6
Gohir.D12G022000 Gossypium hirsutum HOM05D003735 ORTHO05D004550 8.0e-144 514.2 412 61.9
Nn5g30431 Nelumbo nucifera HOM05D003735 ORTHO05D004550 8.0e-144 514.2 414 61.1
RcHm_v2.0_Chr6g0254911 Rosa chinensis HOM05D003735 ORTHO05D004550 1.0e-143 513.8 413 63.0
Duzib248G1182 Durio zibethinus HOM05D003735 ORTHO05D004550 1.8e-143 513.1 412 61.2
Gorai.008G022500 Gossypium raimondii HOM05D003735 ORTHO05D004550 3.1e-143 512.3 412 61.4
FvH4_2g05040 Fragaria vesca HOM05D003735 ORTHO05D004550 4.0e-143 511.9 413 62.7
ECA234G0132 Erigeron canadensis HOM05D003735 ORTHO05D004550 5.2e-143 511.5 413 62.5
MD10G1098700 Malus domestica HOM05D003735 ORTHO05D004550 5.2e-143 511.5 411 61.8
MD10G1147300 Malus domestica HOM05D003735 ORTHO05D004550 5.2e-143 511.5 411 61.8
SalBow3G2544 Salvia bowleyana HOM05D003735 ORTHO05D004550 5.2e-143 511.5 411 61.3
RcHm_v2.0_Chr2g0122061 Rosa chinensis HOM05D003735 ORTHO05D004550 6.8e-143 511.1 413 62.5
Ca_11064_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 8.9e-143 510.8 416 59.1
Peaxi162Scf00016g02426 Petunia axillaris HOM05D003735 ORTHO05D004550 8.9e-143 510.8 415 61.7
EL10Ac9g22264 Beta vulgaris HOM05D003735 ORTHO05D004550 1.2e-142 510.4 416 61.1
Sopen01g049750 Solanum pennellii HOM05D003735 ORTHO05D004550 1.2e-142 510.4 415 61.0
arahy.Tifrunner.gnm1.ann1.HR3ZI9 Arachis hypogaea HOM05D003735 ORTHO05D004550 1.5e-142 510.0 413 60.3
CAN.G606.4 Capsicum annuum HOM05D003735 ORTHO05D004550 2.0e-142 509.6 417 61.4
Hund06312 Selenicereus undatus HOM05D003735 ORTHO05D004550 2.0e-142 509.6 418 60.5
PGSC0003DMG400025861 Solanum tuberosum HOM05D003735 ORTHO05D004550 2.6e-142 509.2 415 61.7
PGR142G3714 Punica granatum HOM05D003735 ORTHO05D004550 7.5e-142 507.7 417 61.6
BolC6t35561H Brassica oleracea HOM05D003735 ORTHO05D004550 9.8e-142 507.3 415 60.5
Lj9C323T5 Lonicera japonica HOM05D003735 ORTHO05D004550 1.3e-141 506.9 318 75.5
Solyc01g107550.3 Solanum lycopersicum HOM05D003735 ORTHO05D004550 1.3e-141 506.9 415 60.7
Gorai.008G022400 Gossypium raimondii HOM05D003735 ORTHO05D004550 1.7e-141 506.5 412 61.2
THA.LOC104825376 Tarenaya hassleriana HOM05D003735 ORTHO05D004550 1.7e-141 506.5 412 60.9
TWI75G1082 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 1.7e-141 506.5 412 61.4
C06p04320 Brassica napus HOM05D003735 ORTHO05D004550 2.9e-141 505.8 415 60.0
Nitab4.5_0011634g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 2.9e-141 505.8 431 60.6
BcaC08g43148 Brassica carinata HOM05D003735 ORTHO05D004550 3.7e-141 505.4 415 60.0
FAN24G3115 Fragaria x ananassa HOM05D003735 ORTHO05D004550 3.7e-141 505.4 413 62.0
Eucgr.I01100 Eucalyptus grandis HOM05D003735 ORTHO05D004550 8.3e-141 504.2 318 74.2
Thecc.02G109600 Theobroma cacao HOM05D003735 ORTHO05D004550 8.3e-141 504.2 428 59.6
TWI79G0069 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 8.3e-141 504.2 412 60.2
Carub.0001s3903 Capsella rubella HOM05D003735 ORTHO05D004550 1.1e-140 503.8 415 61.2
Psat6g217600 Pisum sativum HOM05D003735 ORTHO05D004550 1.1e-140 503.8 414 59.4
BraA06t23583Z Brassica rapa HOM05D003735 ORTHO05D004550 2.4e-140 502.7 415 59.8
A06p03780 Brassica napus HOM05D003735 ORTHO05D004550 3.2e-140 502.3 415 60.0
TPR.G3238 Trifolium pratense HOM05D003735 ORTHO05D004550 3.2e-140 502.3 319 73.0
FAN27G1495 Fragaria x ananassa HOM05D003735 ORTHO05D004550 7.0e-140 501.1 429 60.6
MBI16_g19654_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D004550 9.2e-140 500.7 404 62.9
Lalb_Chr09g0319561 Lupinus albus HOM05D003735 ORTHO05D004550 1.6e-139 500.0 419 59.9
FAN15G3608 Fragaria x ananassa HOM05D003735 ORTHO05D004550 2.0e-139 499.6 429 60.4
FAN20G1457 Fragaria x ananassa HOM05D003735 ORTHO05D004550 2.0e-139 499.6 429 60.1
ClCG05G010320 Citrullus lanatus HOM05D003735 ORTHO05D004550 2.7e-139 499.2 413 59.6
CARHR039880 Cardamine hirsuta HOM05D003735 ORTHO05D004550 4.6e-139 498.4 416 60.1
Oeu029527.5 Olea europaea HOM05D003735 ORTHO05D004550 4.6e-139 498.4 458 55.7
Aa31LG10G4250 Aethionema arabicum HOM05D003735 ORTHO05D004550 6.0e-139 498.0 416 60.6
AUR62025585 Chenopodium quinoa HOM05D003735 ORTHO05D004550 7.8e-139 497.7 416 58.9
Sp1g36700 Schrenkiella parvula HOM05D003735 ORTHO05D004550 1.7e-138 496.5 415 59.0
AT1G49820 Arabidopsis thaliana HOM05D003735 ORTHO05D004550 3.9e-138 495.4 417 60.0
arahy.Tifrunner.gnm1.ann1.678ZZJ Arachis hypogaea HOM05D003735 ORTHO05D004550 5.0e-138 495.0 446 56.1
MELO3C019550.2 Cucumis melo HOM05D003735 ORTHO05D004550 8.6e-138 494.2 413 58.4
Thhalv10011522m.g Eutrema salsugineum HOM05D003735 ORTHO05D004550 8.6e-138 494.2 415 59.5
HanXRQChr10g0296961 Helianthus annuus HOM05D003735 ORTHO05D004550 8.6e-138 494.2 338 71.6
MSTRG.27746 Avicennia marina HOM05D003735 ORTHO05D004550 4.3e-137 491.9 414 58.0
CSS0020963 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 4.3e-137 491.9 319 74.6
BcaB07g33662 Brassica carinata HOM05D003735 ORTHO05D004550 5.6e-137 491.5 416 58.9
AUR62001369 Chenopodium quinoa HOM05D003735 ORTHO05D004550 7.3e-137 491.1 416 58.7
Prupe.7G233900 Prunus persica HOM05D003735 ORTHO05D004550 3.6e-136 488.8 418 57.4
CsaV3_3G018170 Cucumis sativus L. HOM05D003735 ORTHO05D004550 6.2e-136 488.0 413 57.4
AL1G57300 Arabidopsis lyrata HOM05D003735 ORTHO05D004550 1.4e-135 486.9 415 60.0
Lsat_1_v5_gn_5_115400 Lactuca sativa HOM05D003735 ORTHO05D004550 3.1e-135 485.7 338 69.8
CDE02G0578 Ceratophyllum demersum HOM05D003735 ORTHO05D004550 5.2e-135 485.0 419 58.0
unitig_747.g21222 Utricularia gibba HOM05D003735 ORTHO05D004550 1.5e-134 483.4 416 57.7
TPR.G19078 Trifolium pratense HOM05D003735 ORTHO05D004550 2.0e-134 483.0 419 58.2
Sed0001414 Sechium edule HOM05D003735 ORTHO05D004550 7.5e-134 481.1 318 70.4
Oeu013756.1 Olea europaea HOM05D003735 ORTHO05D004550 1.7e-133 479.9 499 50.5
AUR62039068 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.9e-132 476.5 412 57.5
Gohir.D12G022100 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.2e-131 473.8 412 57.8
ECA232G2787 Erigeron canadensis HOM05D003735 ORTHO05D004550 1.6e-131 473.4 413 58.4
Os04g0669800 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 4.6e-131 471.9 414 56.8
PSO675G8377 Papaver somniferum HOM05D003735 ORTHO05D004550 1.0e-130 470.7 411 58.4
HPP92_011617 Vanilla planifolia HOM05D003735 ORTHO05D004550 1.0e-130 470.7 412 56.8
Zm00001eb433310 Zea mays HOM05D003735 ORTHO05D004550 6.6e-130 468.0 414 57.0
Os04g0669900 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 3.3e-129 465.7 415 55.9
PSO541G1406 Papaver somniferum HOM05D003735 ORTHO05D004550 1.6e-128 463.4 411 58.4
VMungo1215G1247 Vigna mungo HOM05D003735 ORTHO05D004550 5.8e-126 454.9 319 66.5
Ah.01g018310 Amaranthus hybridus HOM05D003735 ORTHO05D004550 2.2e-125 453.0 416 55.5
ATR0589G073 Amborella trichopoda HOM05D003735 ORTHO05D004550 5.4e-124 448.4 413 54.7
MD10G1098200 Malus domestica HOM05D003735 ORTHO05D004550 2.7e-123 446.0 317 68.1
RcHm_v2.0_Chr6g0254921 Rosa chinensis HOM05D003735 ORTHO05D004550 6.2e-120 434.9 360 60.8
BcaC08g43149 Brassica carinata HOM05D003735 ORTHO05D004550 1.9e-116 423.3 415 54.0
vmacro01998 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 7.8e-115 417.9 393 56.5
QL11p033306 Quercus lobata HOM05D003735 ORTHO05D004550 5.6e-113 411.8 302 66.6
SMO340G0152 Selaginella moellendorffii HOM05D003735 ORTHO05D004550 5.6e-113 411.8 321 59.5
Pp3c6_19060 Physcomitrium patens HOM05D003735 ORTHO05D004550 9.6e-113 411.0 317 60.3
AagrBONN_evm.TU.Sc2ySwM_344.2850 Anthoceros agrestis HOM05D003735 ORTHO05D004550 6.2e-112 408.3 341 59.8
Mapoly0029s0020 Marchantia polymorpha HOM05D003735 ORTHO05D004550 6.9e-111 404.8 321 59.2
AUR62010319 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.7e-106 390.2 317 59.3
arahy.Tifrunner.gnm1.ann1.TAI6X1 Arachis hypogaea HOM05D003735 ORTHO05D004550 3.3e-97 359.4 272 64.3
CBR_g23696 Chara braunii HOM05D003735 ORTHO05D004550 1.3e-96 357.5 335 53.7
arahy.Tifrunner.gnm1.ann1.Z6IW8Q Arachis hypogaea HOM05D003735 ORTHO05D004550 1.3e-93 347.4 235 69.8
Cfa004590 Carpinus fangiana HOM05D003735 ORTHO05D004550 8.7e-90 334.7 298 57.0
Nitab4.5_0026736g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.2e-86 324.3 198 76.3
QL11p033359 Quercus lobata HOM05D003735 ORTHO05D004550 5.8e-86 322.0 189 76.7
Nitab4.5_0001143g0070 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.7e-85 320.5 198 75.3
Peaxi162Scf00152g00332 Petunia axillaris HOM05D003735 ORTHO05D004550 2.2e-80 303.5 285 55.8
MCO11G261 Micromonas commoda HOM05D003735 ORTHO05D007494 1.2e-78 297.7 352 46.0
Cc02_g18410 Coffea canephora HOM05D003735 ORTHO05D004550 1.9e-76 290.4 221 65.6
PRCOL_00000373 Prasinoderma coloniale HOM05D003735 ORTHO05D006943 7.9e-75 285.0 322 46.6
Cre16.g673550 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D007494 8.8e-74 281.6 308 46.4
CBR_g12222 Chara braunii HOM05D003735 ORTHO05D004550 1.2e-70 271.2 403 37.2
Cc01_g17410 Coffea canephora HOM05D003735 ORTHO05D004550 3.3e-65 253.1 174 70.1
arahy.Tifrunner.gnm1.ann1.83SMNU Arachis hypogaea HOM05D003735 ORTHO05D004550 1.5e-62 244.2 205 63.4
Hma1.2p1_1023F.1_g249070 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 7.2e-60 235.3 258 50.0
Ciclev10029480m.g Citrus clementina HOM05D003735 ORTHO05D004550 3.9e-58 229.6 178 65.2
arahy.Tifrunner.gnm1.ann1.B546P6 Arachis hypogaea HOM05D003735 ORTHO05D004550 2.4e-55 220.3 196 57.7
Glyma.01G244200 Glycine max HOM05D003735 ORTHO05D004550 2.4e-55 220.3 147 69.4
Glyma.01G244132 Glycine max HOM05D003735 ORTHO05D004550 7.7e-54 215.3 156 64.7
ATR0589G125 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.5e-49 201.1 119 76.5
Nitab4.5_0001143g0030 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.5e-44 184.5 121 69.4
QL11p033356 Quercus lobata HOM05D003735 ORTHO05D004550 3.2e-44 183.3 124 70.2
Peaxi162Scf00152g00233 Petunia axillaris HOM05D003735 ORTHO05D004550 4.5e-38 162.9 194 47.9
Aqoxy6G02845 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 1.7e-37 161.0 124 61.3
Gohir.A13G043900 Gossypium hirsutum HOM05D003735 ORTHO05D004550 2.1e-35 154.1 320 32.5
Gohir.D13G042333 Gossypium hirsutum HOM05D003735 ORTHO05D004550 5.7e-33 146.0 321 32.7
ATR0589G028 Amborella trichopoda HOM05D003735 ORTHO05D004550 7.5e-33 145.6 124 57.3
TPR.G20408 Trifolium pratense HOM05D003735 ORTHO05D004550 4.7e-27 126.3 86 70.9
Gorai.013G047400 Gossypium raimondii HOM05D003735 ORTHO05D004550 2.0e-22 110.9 126 46.8
Nn4g25342 Nelumbo nucifera HOM05D003735 ORTHO05D004550 2.0e-22 110.9 69 73.9
ATR0589G120 Amborella trichopoda HOM05D003735 ORTHO05D004550 6.0e-22 109.4 162 38.9
Gorai.013G047300 Gossypium raimondii HOM05D003735 ORTHO05D004550 3.3e-20 103.6 189 33.9
TPR.G31649 Trifolium pratense HOM05D000067 ORTHO05D000097 4.1e-15 86.7 96 44.8
TPR.G13570 Trifolium pratense HOM05D003735 ORTHO05D004354 1.6e-14 84.7 96 44.8
Cre07.g342900 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D146703 7.1e-07 59.3 293 20.8


User provided reference genes

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