Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 0.0e+00 1286.2 644 100.0
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 4.4e-161 572.4 646 49.8
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 9.1e-50 202.6 704 27.8
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 2.5e-47 194.5 641 30.7
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 2.5e-47 194.5 735 30.5
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 2.1e-46 191.4 734 28.1
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 6.1e-46 189.9 392 36.7
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 1.0e-45 189.1 744 28.1
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 1.4e-45 188.7 735 28.3
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 8.9e-45 186.0 741 28.5
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 1.7e-43 181.8 709 29.1
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 3.7e-43 180.6 577 30.8
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 1.6e-41 175.3 706 29.9
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 5.9e-41 173.3 718 27.3
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 1.0e-40 172.6 733 28.8
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 1.7e-40 171.8 685 30.1
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 8.6e-40 169.5 415 34.5
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 9.5e-39 166.0 591 30.1
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 2.8e-38 164.5 401 33.9
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 1.8e-37 161.8 531 29.9
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 2.3e-37 161.4 687 28.1
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 3.1e-37 161.0 401 33.4
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 8.9e-37 159.5 718 27.0
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 8.9e-37 159.5 736 27.0
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 2.0e-36 158.3 732 26.8
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 5.8e-36 156.8 320 35.0
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 9.8e-36 156.0 712 26.0
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 4.9e-35 153.7 719 26.4
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 1.9e-34 151.8 611 28.3
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.4e-34 151.4 478 32.6
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 4.1e-34 150.6 671 24.9
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 4.1e-34 150.6 683 27.5
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 1.6e-33 148.7 411 31.9
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 4.6e-33 147.1 697 27.8
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 1.0e-32 146.0 524 27.7
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 1.0e-32 146.0 708 25.3
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.3e-32 145.6 360 33.6
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.3e-32 145.6 409 30.8
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.7e-32 145.2 698 27.1
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 4.3e-31 140.6 696 26.6
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 7.3e-31 139.8 525 28.4
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 9.5e-31 139.4 507 29.0
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 2.3e-29 134.8 685 26.6
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 5.2e-29 133.7 468 29.9
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 8.9e-29 132.9 449 29.0
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 8.9e-29 132.9 620 27.9
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 3.4e-28 131.0 520 27.5
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 9.8e-28 129.4 345 30.4
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 9.8e-28 129.4 396 31.6
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 9.8e-28 129.4 411 31.6
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 9.8e-28 129.4 734 24.7
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 1.7e-27 128.6 706 25.6
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 1.4e-26 125.6 403 30.8
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 1.9e-26 125.2 400 31.2
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 4.1e-26 124.0 756 26.1
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.6e-25 122.1 401 29.2
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 4.6e-25 120.6 294 32.7
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 1.0e-24 119.4 456 29.8
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 1.7e-24 118.6 722 26.0
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.7e-24 118.6 425 28.5
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 1.7e-24 118.6 419 30.3
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 3.0e-24 117.9 732 24.6
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 3.0e-24 117.9 406 31.0
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 6.6e-24 116.7 499 26.1
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 6.6e-24 116.7 726 25.2
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 8.6e-24 116.3 329 31.3
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 1.1e-23 115.9 653 25.3
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 1.1e-23 115.9 646 24.9
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.5e-23 114.8 229 35.8
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 2.1e-22 111.7 402 29.6
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 4.7e-22 110.5 372 30.1
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 3.1e-21 107.8 316 33.9
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.1e-21 107.8 281 33.1
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.5e-20 105.5 281 32.4
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 2.0e-20 105.1 324 33.0
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 2.6e-20 104.8 670 24.5
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 3.4e-20 104.4 314 33.1
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.4e-20 104.4 281 31.7
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 3.4e-20 104.4 692 26.0
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.9e-20 102.8 421 27.8
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 1.3e-19 102.4 416 28.8
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 1.7e-19 102.1 324 32.4
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 8.4e-19 99.8 397 29.0
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.1e-18 99.4 235 33.2
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.9e-18 98.6 312 31.1
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 3.2e-18 97.8 324 31.8
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 3.2e-18 97.8 324 31.8
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 5.4e-18 97.1 330 32.1
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 5.4e-18 97.1 312 32.4
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 6.0e-17 93.6 325 33.8
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 7.8e-17 93.2 323 31.0
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.0e-16 92.8 323 30.7
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.0e-16 92.8 323 30.7
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 9.6e-15 86.3 317 30.3
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.6e-14 85.5 316 32.9
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.6e-14 85.5 316 32.9
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.6e-14 85.5 316 32.9
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.1e-14 85.1 318 30.2
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 3.6e-14 84.3 420 25.2
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 6.2e-14 83.6 312 30.1
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 8.1e-14 83.2 415 27.5
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 1.4e-13 82.4 415 26.5
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.4e-13 82.4 318 29.2
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 1.8e-13 82.0 663 24.1
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.0e-13 80.9 362 28.7
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 2.0e-12 78.6 238 31.5
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 3.4e-12 77.8 321 28.7
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 4.4e-12 77.4 231 29.4
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 4.9e-11 73.9 224 29.5
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 6.4e-11 73.6 205 32.7
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 3.2e-10 71.2 430 25.3
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 9.3e-10 69.7 398 25.1
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 1.0e-08 66.2 73 41.1
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 5.1e-08 63.9 231 32.5
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 3.3e-07 61.2 716 21.6
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 2.8e-06 58.2 715 21.0
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 3.6e-06 57.8 352 24.4
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 6.2e-06 57.0 141 34.8
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 8.1e-06 56.6 273 26.0


User provided reference genes

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