Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 3.9e-41 171.0 86 100.0
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 5.3e-22 107.5 62 82.3
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 8.6e-12 73.6 89 50.6
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 5.5e-11 70.9 82 50.0
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 9.5e-11 70.1 90 45.6
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 1.6e-10 69.3 87 46.0
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 2.8e-10 68.6 86 45.3
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 3.6e-10 68.2 90 43.3
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 4.7e-10 67.8 86 50.0
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 6.1e-10 67.4 81 46.9
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.0e-10 67.0 93 45.2
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 1.0e-09 66.6 81 46.9
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.0e-09 66.6 81 48.1
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.4e-09 66.2 86 44.2
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.4e-09 66.2 96 45.8
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.8e-09 65.9 95 46.3
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.8e-09 65.9 95 46.3
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 1.8e-09 65.9 88 39.8
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 2.3e-09 65.5 86 47.7
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 2.3e-09 65.5 91 42.9
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 2.3e-09 65.5 86 46.5
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 2.3e-09 65.5 89 44.9
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 3.0e-09 65.1 86 44.2
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 4.0e-09 64.7 92 43.5
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 4.0e-09 64.7 92 44.6
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.2e-09 64.3 95 45.3
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.2e-09 64.3 95 45.3
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 5.2e-09 64.3 91 44.0
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.8e-09 63.9 95 45.3
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 8.9e-09 63.5 87 46.0
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 8.9e-09 63.5 45 62.2
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 8.9e-09 63.5 96 44.8
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 8.9e-09 63.5 82 47.6
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 1.5e-08 62.8 82 45.1
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 2.0e-08 62.4 91 45.1
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.0e-08 62.4 78 44.9
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.0e-08 62.4 93 45.2
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 2.0e-08 62.4 94 43.6
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.6e-08 62.0 96 40.6
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 2.6e-08 62.0 86 45.3
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 2.6e-08 62.0 87 40.2
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 3.4e-08 61.6 88 40.9
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 3.4e-08 61.6 87 44.8
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 3.4e-08 61.6 85 48.2
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 3.4e-08 61.6 86 44.2
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.4e-08 61.2 45 62.2
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 4.4e-08 61.2 89 44.9
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 4.4e-08 61.2 92 44.6
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 4.4e-08 61.2 92 43.5
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.7e-08 60.8 78 44.9
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.7e-08 60.8 78 43.6
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 5.7e-08 60.8 78 44.9
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 7.5e-08 60.5 45 60.0
Os11g0323860 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 7.5e-08 60.5 78 44.9
Os11g0412484 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 7.5e-08 60.5 78 44.9
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 7.5e-08 60.5 94 40.4
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 9.8e-08 60.1 96 42.7
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 9.8e-08 60.1 78 43.6
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.3e-07 59.7 33 78.8
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.7e-07 59.3 89 41.6
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 2.2e-07 58.9 78 42.3
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.2e-07 58.9 78 43.6
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 2.2e-07 58.9 96 41.7
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 2.2e-07 58.9 87 39.1
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 2.2e-07 58.9 87 39.1
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 2.8e-07 58.5 93 37.6
Zm00001eb333380 Zea mays HOM05D046811 ORTHO05D007620 2.8e-07 58.5 86 41.9
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 3.7e-07 58.2 90 41.1
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 3.7e-07 58.2 91 42.9
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 4.9e-07 57.8 90 43.3
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 6.3e-07 57.4 51 56.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 6.3e-07 57.4 96 40.6
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 8.3e-07 57.0 77 44.2
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 8.3e-07 57.0 86 40.7
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 8.3e-07 57.0 92 41.3
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.1e-06 56.6 88 42.0
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 1.4e-06 56.2 98 37.8
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 1.4e-06 56.2 58 48.3
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 1.4e-06 56.2 90 40.0
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.8e-06 55.8 86 45.3
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.8e-06 55.8 86 39.5
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 1.8e-06 55.8 79 41.8
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 4.1e-06 54.7 101 37.6
SGA_v2.0_scaffold58G20505 Striga asiatica HOM05D001345 ORTHO05D001190 4.1e-06 54.7 45 53.3
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 9.2e-06 53.5 100 40.0


User provided reference genes

Program Settings