Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 0.0e+00 1151.3 564 100.0
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.2e-154 550.8 553 51.7
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.2e-149 534.3 581 48.7
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.0e-145 521.2 559 50.4
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.3e-144 516.2 597 47.9
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 7.3e-144 515.0 585 47.9
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 3.1e-142 509.6 575 48.3
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 5.2e-142 508.8 570 50.2
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 1.2e-141 507.7 551 51.0
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.7e-140 503.8 592 47.6
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 9.2e-139 498.0 573 48.7
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.1e-138 496.9 563 49.0
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.5e-136 490.7 575 47.8
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.9e-136 490.3 564 46.6
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.5e-136 490.0 564 46.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 9.5e-136 488.0 601 47.3
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.6e-135 487.3 568 47.9
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 1.8e-134 483.8 437 57.0
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 3.1e-134 483.0 568 46.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 8.9e-134 481.5 557 47.9
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.5e-133 480.7 565 46.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 4.4e-133 479.2 580 47.1
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.3e-132 477.6 569 46.9
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.9e-132 476.5 571 46.4
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.4e-131 474.2 570 46.7
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 3.2e-131 473.0 556 46.4
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 5.4e-131 472.2 579 45.9
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 9.2e-131 471.5 577 46.1
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.6e-130 470.7 564 45.7
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.6e-130 470.7 558 46.2
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.1e-130 470.3 566 46.3
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 4.6e-130 469.2 594 45.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 4.6e-130 469.2 575 45.9
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 7.8e-130 468.4 562 46.1
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.3e-129 467.6 579 45.6
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 1.3e-129 467.6 572 45.6
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 2.3e-129 466.8 563 45.8
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 5.6e-128 462.2 569 45.5
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.2e-127 461.1 598 44.3
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.4e-126 457.6 555 46.1
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 3.1e-126 456.4 561 44.4
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 4.9e-124 449.1 562 43.1
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 6.4e-124 448.7 568 44.4
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 8.4e-124 448.4 576 42.9
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 1.9e-123 447.2 582 43.8
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.4e-123 446.8 560 43.4
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.6e-122 444.1 567 44.1
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 4.6e-122 442.6 588 43.9
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 4.6e-122 442.6 566 44.7
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.0e-121 441.4 559 44.7
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 6.6e-121 438.7 567 44.1
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.6e-121 438.7 598 42.5
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 6.6e-121 438.7 563 44.2
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 3.3e-120 436.4 564 44.7
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.3e-120 436.0 565 44.4
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.6e-119 434.1 559 44.9
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.1e-118 431.4 590 43.1
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.8e-118 430.6 516 45.9
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.4e-118 430.3 589 41.8
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 3.8e-116 422.9 565 42.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 1.9e-115 420.6 562 42.9
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 3.2e-115 419.9 570 43.2
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 1.6e-114 417.5 602 40.5
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 4.6e-114 416.0 573 43.5
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.9e-112 410.6 580 40.3
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.5e-112 410.2 556 42.8
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 2.1e-111 407.1 575 41.9
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 2.8e-111 406.8 568 41.9
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.1e-110 404.8 569 42.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.4e-110 404.4 521 43.2
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 5.3e-110 402.5 569 42.2
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 6.9e-110 402.1 575 41.4
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 2.2e-108 397.1 562 41.6
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 6.4e-108 395.6 559 42.2
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 6.4e-108 395.6 570 41.2
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 3.2e-107 393.3 570 41.1
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 9.3e-107 391.7 567 40.6
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 9.3e-107 391.7 567 40.6
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.1e-106 390.6 566 41.7
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.7e-106 390.2 603 38.6
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 3.5e-106 389.8 564 40.8
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 3.0e-105 386.7 566 41.0
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 3.0e-105 386.7 565 41.4
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 6.7e-105 385.6 566 41.2
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 5.6e-104 382.5 566 40.6
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.0e-101 374.0 555 40.9
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.1e-99 368.2 425 47.8
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 1.3e-92 344.7 548 39.8
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.2e-92 344.0 398 45.7
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 3.9e-89 333.2 396 47.0
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 5.1e-89 332.8 582 37.6
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.1e-88 331.6 420 44.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 4.5e-85 319.7 402 44.5
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 7.7e-85 318.9 434 42.6
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.3e-84 318.2 361 48.8
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 5.0e-84 316.2 574 36.1
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.7e-79 301.2 538 38.3
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 9.1e-78 295.4 443 39.7
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.8e-57 228.0 233 45.9
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 4.5e-53 213.4 626 27.2
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.9e-51 208.0 231 49.8
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.2e-48 198.7 608 28.5
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.2e-45 188.7 186 50.0
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.9e-44 184.1 562 26.5
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.6e-40 171.0 505 27.5
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.7e-39 168.3 140 60.0
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.6e-37 161.8 129 59.7
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.7e-36 158.3 134 56.0
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 3.5e-29 134.0 397 27.7
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 3.0e-28 131.0 456 25.0
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 9.9e-24 115.9 102 53.9
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.6e-21 108.6 119 45.4
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 8.6e-20 102.8 351 25.9
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 9.6e-19 99.4 147 44.2
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.4e-09 68.9 74 47.3
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 1.5e-08 65.5 43 67.4
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.6e-08 64.7 86 41.9
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 5.8e-08 63.5 81 35.8
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.4e-06 58.9 64 46.9


User provided reference genes

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