Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001516 Daucus carota HOM05D004615 ORTHO05D000385 1.1e-229 799.7 404 100.0
DCAR_032376 Daucus carota HOM05D013476 ORTHO05D012368 5.4e-32 142.9 200 40.5
DCAR_006099 Daucus carota HOM05D022224 ORTHO05D000385 3.4e-26 123.6 212 37.7
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 9.5e-21 105.5 174 33.9
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-20 104.0 159 33.3
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-20 104.0 154 35.1
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-20 104.0 159 33.3
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 3.6e-20 103.6 154 35.1
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 3.6e-20 103.6 159 33.3
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 1.1e-19 102.1 159 33.3
EL10Ac5g11873 Beta vulgaris HOM05D004615 ORTHO05D000385 2.0e-18 97.8 165 33.3
EL10Ac7g17419 Beta vulgaris HOM05D004615 ORTHO05D000385 3.4e-18 97.1 151 34.4
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 3.4e-18 97.1 146 37.7
DCAR_031829 Daucus carota HOM05D024847 ORTHO05D000385 5.8e-18 96.3 201 33.3
EL10Ac9g22619 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-17 95.1 152 34.2
Hund15079 Selenicereus undatus HOM05D020107 ORTHO05D000385 4.9e-17 93.2 174 36.8
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 8.4e-17 92.4 327 25.7
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-16 92.0 136 38.2
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-16 92.0 136 38.2
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-16 92.0 136 38.2
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-16 92.0 136 38.2
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-16 92.0 136 38.2
Solyc11g020843.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.9e-16 91.3 100 42.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 1.9e-16 91.3 135 37.0
DCAR_022238 Daucus carota HOM05D004615 ORTHO05D000385 2.4e-16 90.9 69 56.5
DCAR_029785 Daucus carota HOM05D004615 ORTHO05D000385 2.4e-16 90.9 69 56.5
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 3.2e-16 90.5 136 38.2
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 4.2e-16 90.1 140 36.4
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-16 89.4 142 35.9
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-15 88.2 113 38.1
Sopen08g007140 Solanum pennellii HOM05D000107 ORTHO05D000570 1.6e-15 88.2 107 42.1
EL10Ac6g14405 Beta vulgaris HOM05D004615 ORTHO05D000385 4.6e-15 86.7 113 37.2
EL10Ac9g20807 Beta vulgaris HOM05D004615 ORTHO05D000385 4.6e-15 86.7 134 37.3
Sopen12g014810 Solanum pennellii HOM05D008041 ORTHO05D000385 4.6e-15 86.7 136 36.8
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 6.0e-15 86.3 93 40.9
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.0e-14 85.5 136 35.3
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 1.0e-14 85.5 142 35.2
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 1.7e-14 84.7 300 28.3
Solyc08g016677.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.7e-14 84.7 99 43.4
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 3.0e-14 84.0 138 32.6
DCAR_029877 Daucus carota HOM05D004615 ORTHO05D000385 3.9e-14 83.6 69 50.7
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-14 82.4 142 34.5
DCAR_015813 Daucus carota HOM05D024847 ORTHO05D000385 1.1e-13 82.0 138 34.1
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.5e-13 81.6 175 30.3
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-13 81.3 153 31.4
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.5e-13 80.9 162 29.0
DCAR_010153 Daucus carota HOM05D024847 ORTHO05D000385 2.5e-13 80.9 169 30.2
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 3.3e-13 80.5 137 34.3
EL10Ac3g06149 Beta vulgaris HOM05D004615 ORTHO05D000385 4.3e-13 80.1 142 33.8
EL10Ac9g21235 Beta vulgaris HOM05D004615 ORTHO05D000385 4.3e-13 80.1 142 33.8
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 5.6e-13 79.7 146 32.2
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 7.3e-13 79.3 175 32.6
EL10Ac2g03424 Beta vulgaris HOM05D004615 ORTHO05D000385 9.6e-13 79.0 151 33.1
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 9.6e-13 79.0 138 34.8
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 9.6e-13 79.0 138 34.8
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-12 78.6 146 31.5
EL10Ac2g03160 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-12 78.2 144 31.2
DCAR_029772 Daucus carota HOM05D004615 ORTHO05D000385 2.1e-12 77.8 97 43.3
Sopen11g019240 Solanum pennellii HOM05D008041 ORTHO05D000385 2.1e-12 77.8 138 32.6
Sopen02g004250 Solanum pennellii HOM05D000004 ORTHO05D000385 2.8e-12 77.4 146 32.9
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 3.6e-12 77.0 137 33.6
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.2e-12 76.3 146 30.8
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 6.2e-12 76.3 137 33.6
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 6.2e-12 76.3 90 35.6
EL10Ac1g02022 Beta vulgaris HOM05D004615 ORTHO05D000385 8.1e-12 75.9 136 33.8
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 8.1e-12 75.9 134 30.6
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 8.1e-12 75.9 181 30.9
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 8.1e-12 75.9 122 35.2
AUR62031856 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.8e-11 74.7 162 28.4
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.0e-11 73.6 161 28.6
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.0e-11 73.6 161 28.0
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 4.0e-11 73.6 169 29.0
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 5.3e-11 73.2 216 26.9
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 6.9e-11 72.8 184 28.8
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 6.9e-11 72.8 141 31.2
DCAR_031271 Daucus carota HOM05D022224 ORTHO05D000385 6.9e-11 72.8 269 30.5
EL10Ac6g14681 Beta vulgaris HOM05D010065 ORTHO05D000385 9.0e-11 72.4 75 44.0
EL10Ac1g01725 Beta vulgaris HOM05D004615 ORTHO05D000385 1.2e-10 72.0 94 40.4
EL10Ac3g06972 Beta vulgaris HOM05D010065 ORTHO05D000385 1.2e-10 72.0 75 44.0
DCAR_032202 Daucus carota HOM05D022224 ORTHO05D012368 1.2e-10 72.0 152 34.9
PSO339G1145 Papaver somniferum HOM05D009891 ORTHO05D009626 2.0e-10 71.2 188 26.1
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.4e-10 70.5 142 28.2
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 3.4e-10 70.5 111 35.1
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 5.8e-10 69.7 115 30.4
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 5.8e-10 69.7 136 30.1
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.6e-10 69.3 147 29.3
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 7.6e-10 69.3 125 34.4
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.3e-09 68.6 88 37.5
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 1.3e-09 68.6 108 34.3
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.3e-09 68.6 177 28.2
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.3e-09 68.6 136 29.4
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-09 68.6 94 36.2
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.7e-09 68.2 146 26.7
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-09 67.0 142 30.3
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.9e-09 66.6 155 30.3
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 4.9e-09 66.6 106 37.7
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 6.4e-09 66.2 155 28.4
SGA_v2.0_scaffold107G30768 Striga asiatica HOM05D004615 ORTHO05D000385 6.4e-09 66.2 88 40.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.4e-09 66.2 118 29.7
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 8.4e-09 65.9 162 31.5
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 8.4e-09 65.9 90 33.3
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 8.4e-09 65.9 175 29.1
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 1.4e-08 65.1 184 26.6
AUR62044017 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.9e-08 64.7 94 31.9
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.9e-08 64.7 158 24.7
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.2e-08 63.9 94 31.9
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 5.4e-08 63.2 141 27.7
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 5.4e-08 63.2 169 24.9
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 5.4e-08 63.2 144 30.6
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.3e-08 62.4 94 31.9
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.2e-07 62.0 160 27.5
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.2e-07 62.0 146 24.7
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 1.2e-07 62.0 135 27.4
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 1.6e-07 61.6 124 28.2
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 2.1e-07 61.2 137 25.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-07 60.8 84 33.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.7e-07 60.8 137 29.2
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 2.7e-07 60.8 113 30.1
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 4.6e-07 60.1 176 27.3
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 4.6e-07 60.1 134 26.9
AUR62040143 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.0e-07 59.7 82 34.1
TAR362G0068 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.0e-07 59.7 93 30.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-07 59.3 166 26.5
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-07 59.3 142 26.8
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-07 59.3 123 28.5
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 7.8e-07 59.3 99 33.3
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.0e-06 58.9 155 26.5
EL10Ac3g06255 Beta vulgaris HOM05D004615 ORTHO05D000385 1.0e-06 58.9 103 35.0
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 1.0e-06 58.9 157 26.8
AUR62034408 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.3e-06 58.5 181 29.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.3e-06 58.5 136 27.9
PSO699G0009 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 58.5 108 37.0
Solyc07g020915.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-06 58.5 52 50.0
Zm00001eb269580 Zea mays HOM05D008576 ORTHO05D000385 1.3e-06 58.5 119 26.9
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 1.7e-06 58.2 124 26.6
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 1.7e-06 58.2 100 31.0
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-06 58.2 259 26.6
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 1.7e-06 58.2 135 26.7
Zm00001eb390290 Zea mays HOM05D008576 ORTHO05D000385 1.7e-06 58.2 167 23.4
AUR62043459 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-06 57.8 161 25.5
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 2.3e-06 57.8 82 35.4
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-06 57.8 121 25.6
DCAR_032421 Daucus carota HOM05D013476 ORTHO05D012368 3.0e-06 57.4 124 33.1
SGA_v2.0_scaffold251G45054 Striga asiatica HOM05D004615 ORTHO05D000385 3.0e-06 57.4 80 37.5
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 3.0e-06 57.4 69 36.2
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 3.0e-06 57.4 80 38.8
TAR369G0393 Trochodendron aralioides HOM05D008595 ORTHO05D000385 3.0e-06 57.4 87 32.2
Zm00001eb027370 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 24.5
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 3.0e-06 57.4 139 23.7
AUR62040854 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.9e-06 57.0 57 42.1
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-06 57.0 131 24.4
PSO339G3546 Papaver somniferum HOM05D009891 ORTHO05D009626 3.9e-06 57.0 160 25.0
Prupe.1G266100 Prunus persica HOM05D005012 ORTHO05D000385 3.9e-06 57.0 84 33.3
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 3.9e-06 57.0 86 36.0
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.1e-06 56.6 143 25.2
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.1e-06 56.6 86 32.6
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 5.1e-06 56.6 139 23.7
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 6.6e-06 56.2 139 23.7
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 8.7e-06 55.8 123 26.0
EL10Ac8g20398 Beta vulgaris HOM05D000137 ORTHO05D000385 8.7e-06 55.8 105 30.5
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 8.7e-06 55.8 106 34.9


User provided reference genes

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