Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001485 Daucus carota HOM05D004657 ORTHO05D005562 2.9e-164 582.0 341 100.0
DCAR_011511 Daucus carota HOM05D004657 ORTHO05D005562 6.9e-97 358.2 250 73.6
DCAR_014230 Daucus carota HOM05D004657 ORTHO05D005562 1.3e-82 310.8 286 62.2
Hma1.2p1_0047F.1_g027890 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 7.7e-80 301.6 326 54.6
FAN28G0529 Fragaria x ananassa HOM05D004657 ORTHO05D005562 3.2e-78 296.2 247 63.6
Prupe.6G184700 Prunus persica HOM05D004657 ORTHO05D005562 7.2e-78 295.0 319 52.7
Gorai.003G038700 Gossypium raimondii HOM05D004657 ORTHO05D005562 2.1e-77 293.5 288 58.0
Thecc.01G102700 Theobroma cacao HOM05D004657 ORTHO05D005562 4.6e-77 292.4 297 56.6
RcHm_v2.0_Chr2g0114541 Rosa chinensis HOM05D004657 ORTHO05D005562 6.1e-77 292.0 244 62.7
TAR381G0611 Trochodendron aralioides HOM05D004657 ORTHO05D005562 7.9e-77 291.6 327 52.0
Gohir.D03G036900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 1.0e-76 291.2 288 58.0
Cpa.g.sc621.1 Carica papaya HOM05D004657 ORTHO05D005562 1.4e-76 290.8 320 54.7
CANSAT01G2418 Cannabis sativa HOM05D004657 ORTHO05D005562 2.3e-76 290.0 289 58.1
COL.COLO4_09954 Corchorus olitorius HOM05D004657 ORTHO05D005562 2.3e-76 290.0 247 61.5
FAN23G0181 Fragaria x ananassa HOM05D004657 ORTHO05D005562 3.9e-76 289.3 243 63.0
FAN19G1231 Fragaria x ananassa HOM05D004657 ORTHO05D005562 6.7e-76 288.5 286 57.3
Gohir.A02G143600 Gossypium hirsutum HOM05D004657 ORTHO05D005562 6.7e-76 288.5 281 58.0
TAR625G0843 Trochodendron aralioides HOM05D004657 ORTHO05D005562 6.7e-76 288.5 356 49.4
CiPaw.04G098700 Carya illinoinensis HOM05D004657 ORTHO05D005562 8.8e-76 288.1 334 51.5
MD15G1325300 Malus domestica HOM05D004657 ORTHO05D005562 2.6e-75 286.6 247 61.5
Hma1.2p1_0308F.1_g120150 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 4.4e-75 285.8 367 49.9
CSS0006663 Camellia sinensis var. sinensis HOM05D004657 ORTHO05D005562 5.7e-75 285.4 395 48.1
Eucgr.I00428 Eucalyptus grandis HOM05D004657 ORTHO05D005562 7.4e-75 285.0 307 53.4
FAN26G2002 Fragaria x ananassa HOM05D004657 ORTHO05D005562 7.4e-75 285.0 266 58.3
MSTRG.3785 Avicennia marina HOM05D004657 ORTHO05D005562 1.3e-74 284.3 351 51.6
PGR004G1209 Punica granatum HOM05D004657 ORTHO05D005562 1.3e-74 284.3 243 61.7
Sp7g36050 Schrenkiella parvula HOM05D004657 ORTHO05D005562 1.3e-74 284.3 247 61.1
Carub.0007s0176 Capsella rubella HOM05D004657 ORTHO05D005562 3.7e-74 282.7 248 60.5
Cc00_g16220 Coffea canephora HOM05D004657 ORTHO05D005562 3.7e-74 282.7 337 52.2
QL06p049779 Quercus lobata HOM05D004657 ORTHO05D005562 3.7e-74 282.7 304 54.9
MELO3C007762.2 Cucumis melo HOM05D004657 ORTHO05D005562 4.8e-74 282.3 375 49.9
Duzib264G0234 Durio zibethinus HOM05D004657 ORTHO05D005562 6.3e-74 282.0 247 59.5
Thhalv10026765m.g Eutrema salsugineum HOM05D004657 ORTHO05D005562 6.3e-74 282.0 247 61.1
Manes.12G135900 Manihot esculenta HOM05D004657 ORTHO05D005562 6.3e-74 282.0 303 53.8
Lsat_1_v5_gn_4_142741 Lactuca sativa HOM05D004657 ORTHO05D005562 8.2e-74 281.6 236 62.7
CsaV3_6G045490 Cucumis sativus L. HOM05D004657 ORTHO05D005562 1.1e-73 281.2 248 60.1
ClCG01G018830 Citrullus lanatus HOM05D004657 ORTHO05D005562 1.4e-73 280.8 364 47.3
Cfa002676 Carpinus fangiana HOM05D004657 ORTHO05D005562 1.8e-73 280.4 297 55.2
Haze_24945 Corylus avellana HOM05D004657 ORTHO05D005562 1.8e-73 280.4 325 51.1
Lj2P550T25 Lonicera japonica HOM05D004657 ORTHO05D005562 1.8e-73 280.4 310 53.2
CARHR246860 Cardamine hirsuta HOM05D004657 ORTHO05D005562 3.1e-73 279.6 247 59.9
Ciclev10027598m.g Citrus clementina HOM05D004657 ORTHO05D005562 4.1e-73 279.3 242 60.7
Lj6g0008145 Lotus japonicus HOM05D004657 ORTHO05D005562 5.3e-73 278.9 376 49.2
AT4G39840 Arabidopsis thaliana HOM05D004657 ORTHO05D005562 6.9e-73 278.5 284 55.6
Medtr3g087360 Medicago truncatula HOM05D004657 ORTHO05D005562 1.5e-72 277.3 286 52.8
AL7G12070 Arabidopsis lyrata HOM05D004657 ORTHO05D005562 4.5e-72 275.8 279 55.6
Potri.007G091900 Populus trichocarpa HOM05D004657 ORTHO05D005562 4.5e-72 275.8 288 53.8
BcaNung00905 Brassica carinata HOM05D004657 ORTHO05D005562 5.9e-72 275.4 247 58.7
C01p00860 Brassica napus HOM05D004657 ORTHO05D005562 5.9e-72 275.4 247 58.7
BolC1t00087H Brassica oleracea HOM05D004657 ORTHO05D005562 5.9e-72 275.4 247 58.7
A01p00750 Brassica napus HOM05D004657 ORTHO05D005562 1.3e-71 274.2 295 53.2
BraA01t00078Z Brassica rapa HOM05D004657 ORTHO05D005562 1.3e-71 274.2 273 55.3
Aqoxy6G00812 Aquilegia oxysepala HOM05D004657 ORTHO05D005562 1.7e-71 273.9 326 50.9
THA.LOC104807698 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 1.7e-71 273.9 244 59.4
VMungo1383G1250 Vigna mungo HOM05D004657 ORTHO05D005562 1.7e-71 273.9 243 58.0
Duzib147G0720 Durio zibethinus HOM05D004657 ORTHO05D005562 2.9e-71 273.1 308 52.6
CiPaw.03G141100 Carya illinoinensis HOM05D004657 ORTHO05D005562 1.1e-70 271.2 330 49.4
Gohir.D11G222100 Gossypium hirsutum HOM05D004657 ORTHO05D005562 1.1e-70 271.2 334 52.1
PGSC0003DMG400001895 Solanum tuberosum HOM05D004657 ORTHO05D005562 1.1e-70 271.2 305 52.8
Sabra07G0075500 Salix brachista HOM05D004657 ORTHO05D005562 1.4e-70 270.8 247 58.7
Phvul.002G255300 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 1.9e-70 270.4 233 57.5
Psat5g089640 Pisum sativum HOM05D004657 ORTHO05D005562 1.9e-70 270.4 341 48.1
Aa31LG6G15430 Aethionema arabicum HOM05D004657 ORTHO05D005562 2.5e-70 270.0 282 51.8
Migut.L00115 Erythranthe guttata HOM05D004657 ORTHO05D005562 3.2e-70 269.6 327 56.0
THA.LOC104824872 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 3.2e-70 269.6 306 51.0
TWI53G1309 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 3.2e-70 269.6 289 55.0
BcaNung05325 Brassica carinata HOM05D004657 ORTHO05D005562 4.2e-70 269.2 248 58.5
A08p23310 Brassica napus HOM05D004657 ORTHO05D005562 4.2e-70 269.2 248 58.5
BraA08t34286Z Brassica rapa HOM05D004657 ORTHO05D005562 4.2e-70 269.2 248 58.5
Gorai.007G239400 Gossypium raimondii HOM05D004657 ORTHO05D005562 4.2e-70 269.2 334 52.1
Sabra05G0063000 Salix brachista HOM05D004657 ORTHO05D005562 7.2e-70 268.5 247 58.7
Glyma.11G239700 Glycine max HOM05D004657 ORTHO05D005562 9.4e-70 268.1 289 50.5
TWI77G0153 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 9.4e-70 268.1 326 51.2
unitig_748.g8654 Utricularia gibba HOM05D004657 ORTHO05D005562 9.4e-70 268.1 337 49.3
Gohir.A11G200900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 1.2e-69 267.7 334 52.1
PSO541G4803 Papaver somniferum HOM05D004657 ORTHO05D005562 1.2e-69 267.7 252 58.3
HanXRQChr17g0543271 Helianthus annuus HOM05D004657 ORTHO05D005562 1.6e-69 267.3 374 47.1
Solyc04g055090.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 1.6e-69 267.3 328 50.3
Manes.13G075300 Manihot esculenta HOM05D004657 ORTHO05D005562 2.1e-69 266.9 285 51.9
Lsat_1_v5_gn_5_43821 Lactuca sativa HOM05D004657 ORTHO05D005562 2.7e-69 266.5 333 48.9
Sed0024330 Sechium edule HOM05D004657 ORTHO05D005562 3.6e-69 266.2 353 48.2
MSTRG.2565 Avicennia marina HOM05D004657 ORTHO05D005562 4.7e-69 265.8 321 49.8
Potri.005G076500 Populus trichocarpa HOM05D004657 ORTHO05D005562 4.7e-69 265.8 288 52.4
C03p78370 Brassica napus HOM05D004657 ORTHO05D005562 6.1e-69 265.4 285 53.7
BolC3t20095H Brassica oleracea HOM05D004657 ORTHO05D005562 1.0e-68 264.6 285 53.3
PSO781G0272 Papaver somniferum HOM05D004657 ORTHO05D005562 1.8e-68 263.8 326 50.9
Glyma.18G017700 Glycine max HOM05D004657 ORTHO05D005562 2.3e-68 263.5 276 50.4
VMungo0251G2127 Vigna mungo HOM05D004657 ORTHO05D005562 1.1e-67 261.2 233 56.7
SGA_v2.0_scaffold47G17783 Striga asiatica HOM05D004657 ORTHO05D005562 1.5e-67 260.8 317 53.0
Sopen04g024940 Solanum pennellii HOM05D004657 ORTHO05D005562 2.0e-67 260.4 325 48.6
Solyc03g078640.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 2.6e-67 260.0 243 59.3
CAN.G480.1 Capsicum annuum HOM05D004657 ORTHO05D005562 3.3e-67 259.6 259 57.1
Glyma.08G136600 Glycine max HOM05D004657 ORTHO05D005562 4.4e-67 259.2 301 49.8
Rhsim10G0161200 Rhododendron simsii HOM05D004657 ORTHO05D005562 5.7e-67 258.8 350 48.0
PGSC0003DMG400023187 Solanum tuberosum HOM05D004657 ORTHO05D005562 5.7e-67 258.8 243 58.8
Sopen03g021540 Solanum pennellii HOM05D004657 ORTHO05D005562 9.7e-67 258.1 243 58.8
arahy.Tifrunner.gnm1.ann1.Q2VPH2 Arachis hypogaea HOM05D004657 ORTHO05D005562 1.3e-66 257.7 298 49.0
Lalb_Chr07g0185151 Lupinus albus HOM05D004657 ORTHO05D005562 1.3e-66 257.7 295 48.1
Phvul.001G251700 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 1.3e-66 257.7 243 54.7
Peaxi162Scf00805g00021 Petunia axillaris HOM05D004657 ORTHO05D005562 1.7e-66 257.3 326 48.2
Atru.chr4.84 Acer truncatum HOM05D004657 ORTHO05D005562 1.1e-65 254.6 290 51.0
Medtr8g090265 Medicago truncatula HOM05D004657 ORTHO05D005562 1.1e-65 254.6 288 50.3
Lj4g0007261 Lotus japonicus HOM05D004657 ORTHO05D005562 1.4e-65 254.2 293 51.2
MSTRG.23340 Avicennia marina HOM05D004657 ORTHO05D005562 2.4e-65 253.4 339 49.9
SGA_v2.0_scaffold34G13594 Striga asiatica HOM05D004657 ORTHO05D005562 3.1e-65 253.1 356 50.3
arahy.Tifrunner.gnm1.ann1.4BU7T8 Arachis hypogaea HOM05D004657 ORTHO05D005562 4.1e-65 252.7 298 48.3
Sc16g0005630 Simmondsia chinensis HOM05D004657 ORTHO05D005562 4.1e-65 252.7 233 54.9
unitig_32.g11813 Utricularia gibba HOM05D004657 ORTHO05D005562 1.6e-64 250.8 295 47.5
Psat7g054320 Pisum sativum HOM05D004657 ORTHO05D005562 7.7e-64 248.4 238 55.5
TPR.G6250 Trifolium pratense HOM05D004657 ORTHO05D005562 1.0e-63 248.1 229 56.3
Nitab4.5_0000004g0340 Nicotiana tabacum HOM05D004657 ORTHO05D005562 2.9e-63 246.5 266 53.4
Nitab4.5_0000897g0030 Nicotiana tabacum HOM05D004657 ORTHO05D005562 3.8e-63 246.1 267 53.9
MBI02_g08733_MAGBIO Magnolia biondii HOM05D004657 ORTHO05D005562 1.8e-60 237.3 321 45.8
SalBow3G2946 Salvia bowleyana HOM05D004657 ORTHO05D005562 1.5e-59 234.2 211 58.8
Glyma.05G179100 Glycine max HOM05D004657 ORTHO05D005562 1.8e-57 227.3 356 45.5
unitig_88.g27724 Utricularia gibba HOM05D004657 ORTHO05D005562 2.0e-56 223.8 222 53.2
Lj4g0017498 Lotus japonicus HOM05D004657 ORTHO05D005562 2.3e-52 210.3 287 46.7
SHI11535 Sapria himalayana HOM05D004657 ORTHO05D000023 2.5e-46 190.3 286 40.2
HPP92_016347 Vanilla planifolia HOM05D004657 ORTHO05D008789 3.7e-42 176.4 290 40.3
SEGI_28024 Sequoiadendron giganteum HOM05D004657 ORTHO05D005562 2.5e-38 163.7 258 36.8
Os08g0411300 Oryza sativa ssp. japonica HOM05D004657 ORTHO05D005562 5.6e-38 162.5 247 40.5
Zm00001eb001010 Zea mays HOM05D004657 ORTHO05D005562 3.6e-37 159.8 238 41.2
ATR0564G070 Amborella trichopoda HOM05D004657 ORTHO05D005562 2.6e-35 153.7 230 39.1
Actinidia36592 Actinidia chinensis HOM05D004657 ORTHO05D005562 2.9e-34 150.2 107 70.1
Mapoly0036s0106 Marchantia polymorpha HOM05D004657 ORTHO05D005562 1.0e-31 141.7 247 35.6
SMO012G0039 Selaginella moellendorffii HOM05D004657 ORTHO05D005562 4.7e-29 132.9 253 35.2
Nitab4.5_0000104g0160 Nicotiana tabacum HOM05D004657 ORTHO05D005562 8.9e-28 128.6 334 30.5
TPR.G17843 Trifolium pratense HOM05D004657 ORTHO05D005562 1.5e-27 127.9 87 67.8
CDE12G0473 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 2.2e-26 124.0 171 44.4
Pp3c8_17900 Physcomitrium patens HOM05D004657 ORTHO05D005562 1.2e-24 118.2 207 33.3
AagrBONN_evm.TU.Sc2ySwM_368.2671 Anthoceros agrestis HOM05D004657 ORTHO05D005562 7.8e-24 115.5 277 29.2
Pp3c24_14210 Physcomitrium patens HOM05D004657 ORTHO05D005562 3.0e-23 113.6 231 32.9
CBR_g45841 Chara braunii HOM05D004657 ORTHO05D005562 4.3e-22 109.8 224 31.2
Zm00001eb119110 Zea mays HOM05D004657 ORTHO05D005562 1.6e-21 107.8 213 33.8
CBR_g57642 Chara braunii HOM05D004657 ORTHO05D005562 1.4e-20 104.8 224 29.9
MD01G1028100 Malus domestica HOM05D004657 ORTHO05D005562 1.9e-17 94.4 161 39.8
Zm00001eb168110 Zea mays HOM05D004657 ORTHO05D005562 5.4e-17 92.8 206 30.6
Zm00001eb272140 Zea mays HOM05D004657 ORTHO05D005562 1.0e-15 88.6 146 36.3
Oeu054841.2 Olea europaea HOM05D004657 ORTHO05D005562 2.3e-12 77.4 155 38.1
Zm00001eb342170 Zea mays HOM05D004657 ORTHO05D005562 1.9e-09 67.8 93 43.0
Zm00001eb332070 Zea mays HOM05D004657 ORTHO05D005562 7.1e-09 65.9 54 51.9
Zm00001eb342160 Zea mays HOM05D004657 ORTHO05D005562 1.6e-08 64.7 150 33.3
Oeu002176.1 Olea europaea HOM05D004657 ORTHO05D005562 2.1e-08 64.3 42 59.5
Zm00001eb295260 Zea mays HOM05D004657 ORTHO05D005562 2.7e-08 63.9 142 31.7
Sed0008262 Sechium edule HOM05D004657 ORTHO05D005562 3.5e-08 63.5 116 43.1
Zm00001eb030060 Zea mays HOM05D004657 ORTHO05D005562 4.6e-08 63.2 93 40.9
Zm00001eb008600 Zea mays HOM05D004657 ORTHO05D005562 3.3e-06 57.0 197 26.9
CDE04G1361 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 5.6e-06 56.2 122 36.1


User provided reference genes

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