Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 9.0e-71 270.0 124 100.0
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 4.4e-33 144.8 84 81.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 9.7e-33 143.7 84 79.8
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 9.7e-33 143.7 125 56.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.3e-32 143.3 126 61.9
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.8e-32 142.1 82 80.5
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 4.8e-32 141.4 85 77.6
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 4.8e-32 141.4 126 58.7
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 6.3e-32 141.0 85 76.5
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 8.2e-32 140.6 85 77.6
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.1e-31 140.2 82 79.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.8e-31 139.4 86 74.4
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 3.1e-31 138.7 82 78.0
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.1e-31 138.3 84 76.2
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 7.0e-31 137.5 86 72.1
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 7.0e-31 137.5 82 76.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 7.0e-31 137.5 83 77.1
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 9.1e-31 137.1 116 58.6
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 9.1e-31 137.1 86 72.1
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 9.1e-31 137.1 116 59.5
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 9.1e-31 137.1 84 73.8
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.2e-30 136.7 126 57.9
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.2e-30 136.7 83 74.7
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.2e-30 136.7 98 67.3
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.0e-30 136.0 86 70.9
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.5e-30 135.2 82 74.4
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 3.5e-30 135.2 83 75.9
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.5e-30 134.8 82 74.4
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 4.5e-30 134.8 82 74.4
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 5.9e-30 134.4 80 76.2
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 5.9e-30 134.4 84 72.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 5.9e-30 134.4 82 73.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.0e-29 133.7 79 77.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.3e-29 133.3 84 72.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.7e-29 132.9 83 73.5
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.2e-29 132.5 123 55.3
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 2.9e-29 132.1 80 76.2
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.9e-29 132.1 84 72.6
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.8e-29 131.7 126 54.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.0e-29 131.3 84 70.2
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.1e-28 130.2 76 78.9
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.1e-28 130.2 122 54.1
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.2e-28 128.6 84 70.2
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.6e-27 126.3 86 67.4
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.1e-27 125.9 65 81.5
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.1e-27 125.9 94 64.9
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.7e-27 125.6 65 80.0
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.7e-27 125.6 65 80.0
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 6.1e-27 124.4 79 70.9
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.0e-26 123.6 126 54.0
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 2.3e-26 122.5 102 61.8
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 5.2e-26 121.3 77 72.7
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 5.2e-26 121.3 126 50.8
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.6e-25 119.0 77 72.7
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.3e-24 116.7 90 62.2
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.7e-24 116.3 126 50.0
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.2e-24 115.9 126 49.2
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 3.7e-24 115.2 80 66.2
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 6.3e-24 114.4 88 63.6
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.4e-23 113.2 124 50.0
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.6e-22 109.8 84 64.3
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 5.0e-21 104.8 124 49.2
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 6.5e-21 104.4 82 61.0
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 8.5e-21 104.0 93 55.9
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.5e-20 102.4 103 54.4
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 5.5e-20 101.3 82 62.2
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 5.5e-20 101.3 61 70.5
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 7.2e-20 100.9 82 59.8
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.6e-19 99.8 83 57.8
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.7e-19 99.0 86 61.6
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 6.1e-19 97.8 96 54.2
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.4e-18 96.7 45 91.1
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 6.8e-18 94.4 88 52.3
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 6.8e-18 94.4 46 89.1
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.0e-17 92.8 87 54.0
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 9.8e-17 90.5 84 56.0
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 7.0e-15 84.3 89 50.6
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.9e-12 76.3 51 72.5
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 7.2e-12 74.3 87 49.4
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 9.4e-12 73.9 55 67.3
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.5e-09 66.6 50 62.0
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 1.4e-07 60.1 30 80.0


User provided reference genes

Program Settings