Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 1.7e-103 379.4 203 100.0
DCAR_002955 Daucus carota HOM05D005423 ORTHO05D006223 1.3e-55 220.3 118 94.1
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 5.5e-17 92.0 137 37.2
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 9.4e-17 91.3 137 37.2
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 2.1e-16 90.1 173 35.8
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 2.7e-16 89.7 191 31.9
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.7e-16 89.7 137 36.5
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 3.6e-16 89.4 165 33.3
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 1.0e-15 87.8 172 35.5
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 1.0e-15 87.8 143 37.1
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 3.0e-15 86.3 142 35.9
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 3.0e-15 86.3 183 32.2
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 6.7e-15 85.1 146 34.2
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 8.8e-15 84.7 175 33.1
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 2.5e-14 83.2 145 33.1
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 4.3e-14 82.4 147 36.1
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 7.4e-14 81.6 148 35.8
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 1.3e-13 80.9 153 37.9
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 2.8e-13 79.7 186 31.7
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 6.3e-13 78.6 171 30.4
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 1.4e-12 77.4 177 33.9
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.4e-12 77.4 176 33.5
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 1.4e-12 77.4 158 29.7
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.8e-12 77.0 155 32.3
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 1.8e-12 77.0 155 32.3
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.4e-12 76.6 88 45.5
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.1e-12 76.3 155 32.3
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 4.1e-12 75.9 99 40.4
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 4.1e-12 75.9 147 33.3
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.3e-12 75.5 88 44.3
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 5.3e-12 75.5 144 32.6
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 6.9e-12 75.1 158 33.5
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 6.9e-12 75.1 182 30.8
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 9.1e-12 74.7 168 29.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 9.1e-12 74.7 170 30.6
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 9.1e-12 74.7 145 36.6
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.2e-11 74.3 167 27.5
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.2e-11 74.3 163 33.7
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 1.5e-11 73.9 161 31.7
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 1.5e-11 73.9 97 39.2
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.0e-11 73.6 166 30.7
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 2.0e-11 73.6 170 30.6
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 2.0e-11 73.6 149 34.2
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 2.6e-11 73.2 167 27.5
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.6e-11 73.2 184 27.2
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 2.6e-11 73.2 113 35.4
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 2.6e-11 73.2 142 32.4
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.4e-11 72.8 176 31.2
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 3.4e-11 72.8 145 35.9
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 3.4e-11 72.8 145 35.2
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.4e-11 72.8 97 38.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 4.5e-11 72.4 173 32.4
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.5e-11 72.4 119 36.1
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 7.7e-11 71.6 167 31.1
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 7.7e-11 71.6 164 28.7
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 7.7e-11 71.6 114 36.0
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.0e-10 71.2 119 36.1
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.3e-10 70.9 119 37.8
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 1.3e-10 70.9 171 31.0
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.7e-10 70.5 167 31.1
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 2.9e-10 69.7 148 31.8
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 5.0e-10 68.9 167 28.7
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 5.0e-10 68.9 176 30.7
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.0e-10 68.9 178 29.2
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 8.5e-10 68.2 178 29.2
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 1.1e-09 67.8 176 29.0
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.4e-09 67.4 172 27.9
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.4e-09 67.4 172 27.9
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.4e-09 67.4 152 30.3
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.9e-09 67.0 176 27.3
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 2.5e-09 66.6 111 36.0
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 3.2e-09 66.2 184 30.4
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 4.2e-09 65.9 172 27.9
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.2e-09 65.9 119 34.5
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.5e-09 65.5 181 28.2
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 5.5e-09 65.5 144 30.6
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 7.2e-09 65.1 181 30.4
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 9.4e-09 64.7 169 26.6
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.7e-08 63.2 110 34.5
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.4e-07 60.8 165 26.1
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.8e-07 60.5 112 33.9
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.8e-07 60.5 100 31.0
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.8e-07 60.5 135 31.1
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 2.3e-07 60.1 73 41.1
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.3e-07 60.1 116 36.2
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 3.0e-07 59.7 106 37.7
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 3.9e-07 59.3 76 39.5
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 8.8e-07 58.2 116 34.5
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.5e-06 57.4 115 28.7


User provided reference genes

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