Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 3.2e-59 231.5 112 100.0
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.7e-44 182.6 108 76.9
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 6.5e-44 180.6 113 77.9
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 6.5e-44 180.6 112 79.5
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 3.2e-43 178.3 113 77.0
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 4.2e-43 177.9 113 77.0
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 5.5e-43 177.6 116 75.9
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 7.2e-43 177.2 96 86.5
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.6e-42 176.0 107 76.6
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 2.1e-42 175.6 102 81.4
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 2.7e-42 175.3 112 76.8
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 77.0
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 77.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 4.6e-42 174.5 106 77.4
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 4.6e-42 174.5 115 76.5
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 6.1e-42 174.1 113 76.1
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 6.1e-42 174.1 113 76.1
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 7.9e-42 173.7 115 74.8
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 7.9e-42 173.7 106 82.1
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 7.9e-42 173.7 113 76.1
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 1.0e-41 173.3 119 73.1
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 1.0e-41 173.3 116 74.1
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.3e-41 172.9 113 76.1
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.8e-41 172.6 109 77.1
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.8e-41 172.6 112 72.3
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 3.0e-41 171.8 96 84.4
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 3.9e-41 171.4 96 85.4
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 5.1e-41 171.0 113 74.3
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.7e-41 170.2 122 71.3
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.7e-41 170.2 122 71.3
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.5e-40 169.5 105 77.1
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.9e-40 169.1 114 72.8
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.5e-40 168.7 99 80.8
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 3.3e-40 168.3 116 75.0
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 7.4e-40 167.2 109 75.2
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.3e-39 166.4 114 71.1
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.3e-39 166.4 114 71.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 70.2
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 98 81.6
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.2e-39 165.6 112 71.4
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 2.2e-39 165.6 107 76.6
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.8e-39 165.2 113 70.8
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.8e-39 165.2 96 81.2
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.8e-39 165.2 113 70.8
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 4.8e-39 164.5 114 71.9
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 6.3e-39 164.1 102 76.5
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 6.3e-39 164.1 113 72.6
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 8.2e-39 163.7 111 73.0
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.1e-38 163.3 101 77.2
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.1e-38 163.3 96 80.2
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 96 80.2
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 96 80.2
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 96 80.2
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.8e-38 162.5 105 72.4
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.8e-38 162.5 96 78.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.8e-38 162.5 109 74.3
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 2.4e-38 162.2 94 83.0
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 2.4e-38 162.2 107 75.7
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 3.1e-38 161.8 97 84.5
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 3.1e-38 161.8 98 78.6
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 4.1e-38 161.4 96 79.2
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 5.3e-38 161.0 115 67.8
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.9e-38 160.6 96 79.2
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.5e-37 159.5 102 74.5
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.6e-37 158.7 129 65.9
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 3.4e-37 158.3 97 78.4
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.5e-37 157.9 115 67.0
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 4.5e-37 157.9 96 80.2
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 7.7e-37 157.1 108 72.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.7e-36 156.0 113 68.1
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.7e-36 156.0 113 68.1
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.7e-36 156.0 113 68.1
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.7e-36 156.0 97 78.4
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.2e-36 155.6 97 78.4
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 2.2e-36 155.6 97 78.4
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.9e-36 155.2 83 88.0
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 2.9e-36 155.2 102 69.6
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 3.8e-36 154.8 97 77.3
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 6.5e-36 154.1 98 75.5
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-35 152.9 98 77.6
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.9e-35 152.5 102 72.5
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 7.2e-35 150.6 102 70.6
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 1.6e-34 149.4 98 76.5
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 3.6e-34 148.3 89 82.0
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 5.7e-32 141.0 98 69.4
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.2e-31 139.0 82 75.6
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.1e-30 136.7 103 65.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 3.8e-28 128.3 94 58.5
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.5e-28 127.1 102 57.8
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.6e-26 121.7 94 67.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 4.7e-26 121.3 90 70.0
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 6.1e-26 120.9 83 74.7
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 5.7e-24 114.4 93 51.6
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.7e-24 113.6 79 72.2
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 3.7e-23 111.7 83 68.7
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 1.2e-21 106.7 110 49.1
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 2.6e-21 105.5 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.7e-15 86.3 77 49.4
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 4.2e-11 71.6 52 69.2
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.4e-09 66.6 92 29.3
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 8.3e-07 57.4 54 50.0


User provided reference genes

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