Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 3.2e-60 235.0 122 100.0
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 3.6e-24 115.2 114 52.6
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 6.2e-24 114.4 114 51.8
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 8.1e-24 114.0 114 52.6
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.4e-23 113.2 114 53.5
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 5.3e-23 111.3 123 51.2
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 2.0e-22 109.4 114 49.1
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.6e-22 109.0 112 50.0
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.6e-22 109.0 112 50.0
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.6e-22 109.0 114 50.9
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 4.4e-22 108.2 112 50.0
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 5.8e-22 107.8 113 46.9
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 5.8e-22 107.8 112 49.1
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 5.8e-22 107.8 113 47.8
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 9.9e-22 107.1 115 53.0
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 9.9e-22 107.1 114 50.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.7e-21 106.3 114 48.2
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 2.9e-21 105.5 116 44.8
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.9e-21 104.8 114 47.4
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.9e-21 104.8 114 47.4
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.9e-21 104.8 114 47.4
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 4.9e-21 104.8 114 49.1
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 6.4e-21 104.4 112 45.5
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.4e-21 104.4 114 44.7
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 1.4e-20 103.2 112 45.5
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.4e-20 103.2 112 47.3
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.9e-20 102.8 114 46.5
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.4e-20 102.4 112 46.4
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 3.2e-20 102.1 114 46.5
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 4.2e-20 101.7 113 43.4
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 4.2e-20 101.7 114 43.0
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 4.2e-20 101.7 113 45.1
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 4.2e-20 101.7 112 45.5
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.2e-20 101.7 114 47.4
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 5.4e-20 101.3 112 46.4
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 5.4e-20 101.3 112 45.5
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 5.4e-20 101.3 112 46.4
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 5.4e-20 101.3 113 44.2
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 5.4e-20 101.3 114 47.4
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 5.4e-20 101.3 114 45.6
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 7.1e-20 100.9 116 46.6
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 7.1e-20 100.9 116 41.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.2e-19 100.1 117 44.4
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.6e-19 99.8 112 45.5
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.7e-19 99.0 113 44.2
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 3.5e-19 98.6 112 50.9
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.5e-19 98.6 113 46.9
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 3.5e-19 98.6 104 51.9
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.6e-19 98.2 113 47.8
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 4.6e-19 98.2 113 42.5
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 7.9e-19 97.4 117 43.6
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 7.9e-19 97.4 113 42.5
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 7.9e-19 97.4 114 46.5
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.3e-18 96.7 114 40.4
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.3e-18 95.9 113 44.2
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.3e-18 95.9 114 43.0
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 2.3e-18 95.9 113 41.6
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 2.3e-18 95.9 117 45.3
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 3.0e-18 95.5 120 40.0
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 3.0e-18 95.5 120 40.0
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.9e-18 95.1 112 43.8
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 5.1e-18 94.7 112 43.8
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.1e-17 93.6 114 42.1
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.5e-17 93.2 114 41.2
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.9e-17 92.8 114 42.1
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.9e-17 92.8 113 41.6
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.9e-17 92.8 117 46.2
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 5.6e-17 91.3 114 39.5
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.6e-17 91.3 114 41.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 7.3e-17 90.9 114 38.6
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 7.3e-17 90.9 114 38.6
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 1.3e-16 90.1 108 43.5
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 1.3e-16 90.1 114 42.1
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.3e-16 90.1 114 42.1
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.6e-16 89.7 114 38.6
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.6e-16 89.7 114 40.4
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 3.6e-16 88.6 115 40.9
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.6e-16 88.6 101 47.5
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 4.8e-16 88.2 121 40.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 8.1e-16 87.4 101 44.6
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 1.1e-15 87.0 115 40.9
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.1e-15 87.0 115 40.9
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.1e-15 87.0 121 41.3
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.1e-15 87.0 117 41.9
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 1.8e-15 86.3 115 40.9
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.8e-15 86.3 115 40.9
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 5.3e-15 84.7 103 42.7
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 6.9e-15 84.3 119 42.9
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.0e-14 82.8 101 43.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 2.6e-14 82.4 101 41.6
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 3.8e-13 78.6 101 41.6
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.9e-12 76.3 104 44.2
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 5.4e-12 74.7 101 41.6
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 1.2e-11 73.6 59 52.5
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.2e-11 73.6 84 45.2
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.1e-11 72.8 117 36.8
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.7e-11 72.4 117 37.6
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.6e-11 71.6 113 35.4
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 6.0e-11 71.2 89 42.7
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 5.1e-10 68.2 107 43.0
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 6.7e-10 67.8 108 36.1
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 7.4e-09 64.3 77 45.5
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 9.6e-09 63.9 113 38.1
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.8e-08 62.4 59 47.5
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.8e-08 62.4 59 47.5
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 4.8e-08 61.6 110 37.3
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 9.0e-07 57.4 120 32.5
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 4.5e-06 55.1 70 48.6
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 5.8e-06 54.7 125 30.4


User provided reference genes

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