Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 1.7e-64 249.2 125 100.0
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 5.2e-58 227.6 125 92.0
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 9.5e-28 127.1 122 53.3
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.2e-26 121.3 120 55.0
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 6.8e-26 120.9 120 55.0
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 8.9e-26 120.6 95 63.2
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 4.4e-25 118.2 117 49.6
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.3e-24 116.7 124 53.2
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 1.7e-24 116.3 118 56.8
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 2.2e-24 115.9 110 55.5
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 2.2e-24 115.9 117 49.6
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 2.9e-24 115.5 117 48.7
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 3.2e-23 112.1 110 53.6
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 7.0e-23 110.9 106 54.7
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.2e-22 110.2 120 51.7
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 1.6e-22 109.8 120 52.5
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 3.5e-22 108.6 122 48.4
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 4.6e-22 108.2 115 47.0
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 4.6e-22 108.2 121 48.8
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 1.3e-21 106.7 114 50.9
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 1.7e-21 106.3 112 54.5
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 2.3e-21 105.9 115 47.8
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 2.3e-21 105.9 111 53.2
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 6.6e-21 104.4 122 50.0
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 6.6e-21 104.4 124 46.8
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 6.6e-21 104.4 117 47.0
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 8.6e-21 104.0 115 51.3
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 1.1e-20 103.6 116 50.0
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 1.5e-20 103.2 120 49.2
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.5e-20 103.2 118 49.2
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 1.9e-20 102.8 122 48.4
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 5.6e-20 101.3 111 45.9
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 5.6e-20 101.3 115 47.8
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.6e-20 101.3 151 43.0
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 7.3e-20 100.9 117 47.9
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.2e-19 100.1 109 50.5
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.2e-19 100.1 112 50.9
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.6e-19 99.8 109 50.5
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.1e-19 99.4 110 49.1
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 2.1e-19 99.4 115 44.3
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 2.1e-19 99.4 109 50.5
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 2.1e-19 99.4 115 48.7
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 2.8e-19 99.0 121 46.3
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 2.8e-19 99.0 93 53.8
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 3.6e-19 98.6 119 42.9
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 3.6e-19 98.6 126 43.7
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 6.2e-19 97.8 99 50.5
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 1.8e-18 96.3 91 53.8
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 1.8e-18 96.3 105 44.8
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 1.8e-18 96.3 119 44.5
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 2.3e-18 95.9 120 45.0
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 5.2e-18 94.7 121 44.6
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 5.2e-18 94.7 104 45.2
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 6.8e-18 94.4 114 44.7
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.2e-17 93.6 119 45.4
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 2.0e-17 92.8 111 45.9
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 2.0e-17 92.8 125 43.2
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 2.6e-17 92.4 116 44.0
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 3.4e-17 92.0 112 42.9
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 4.4e-17 91.7 112 41.1
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 7.5e-17 90.9 109 46.8
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 7.5e-17 90.9 119 42.0
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 7.5e-17 90.9 123 44.7
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 9.8e-17 90.5 119 43.7
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 9.8e-17 90.5 120 45.8
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 9.8e-17 90.5 110 46.4
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 2.2e-16 89.4 102 47.1
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 2.2e-16 89.4 111 45.0
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 3.7e-16 88.6 102 46.1
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 4.9e-16 88.2 111 44.1
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 6.4e-16 87.8 125 40.8
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 6.4e-16 87.8 119 41.2
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 8.3e-16 87.4 119 42.0
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 1.1e-15 87.0 102 46.1
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.1e-15 87.0 117 41.9
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.9e-15 86.3 119 43.7
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 4.1e-15 85.1 107 44.9
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 4.1e-15 85.1 121 42.1
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 4.1e-15 85.1 75 53.3
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 5.4e-15 84.7 86 48.8
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.2e-15 84.0 87 48.3
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 9.2e-15 84.0 86 47.7
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 2.7e-14 82.4 121 41.3
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 3.5e-14 82.0 115 46.1
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 4.6e-14 81.6 118 43.2
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 4.6e-14 81.6 115 46.1
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 7.8e-14 80.9 134 38.8
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 7.8e-14 80.9 134 38.1
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 1.3e-13 80.1 91 45.1
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 3.0e-13 79.0 85 48.2
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 3.0e-13 79.0 85 48.2
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 1.1e-12 77.0 96 43.8
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 1.5e-12 76.6 121 38.0
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.5e-12 76.6 91 41.8
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 5.6e-12 74.7 105 39.0
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 1.2e-11 73.6 90 42.2
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 2.8e-11 72.4 141 34.8
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 2.8e-11 72.4 98 43.9
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 4.7e-11 71.6 94 42.6
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 1.1e-10 70.5 66 51.5
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 2.3e-10 69.3 127 35.4
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 8.9e-10 67.4 61 57.4
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 1.5e-09 66.6 93 43.0
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 5.8e-09 64.7 67 49.3
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 1.3e-08 63.5 71 43.7
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 1.3e-08 63.5 71 43.7
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 1.9e-07 59.7 59 49.2
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 2.7e-06 55.8 101 35.6


User provided reference genes

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