Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001291 Daucus carota HOM05D000294 ORTHO05D000177 6.5e-41 170.2 83 100.0
CDE05G2082 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 1.6e-10 69.3 106 45.3
FvH4_3g12690 Fragaria vesca HOM05D000294 ORTHO05D000177 7.7e-10 67.0 105 42.9
Lj1C1147T4 Lonicera japonica HOM05D000294 ORTHO05D000177 7.7e-10 67.0 109 43.1
CiPaw.10G062600 Carya illinoinensis HOM05D000294 ORTHO05D000177 1.3e-09 66.2 110 40.0
FAN25G0397 Fragaria x ananassa HOM05D000294 ORTHO05D000177 1.3e-09 66.2 105 42.9
TAR627G0988 Trochodendron aralioides HOM05D000294 ORTHO05D000177 1.3e-09 66.2 106 42.5
Sopen02g017650 Solanum pennellii HOM05D000294 ORTHO05D000177 1.7e-09 65.9 108 41.7
FAN21G4012 Fragaria x ananassa HOM05D000294 ORTHO05D000177 2.9e-09 65.1 105 42.9
Hma1.2p1_0640F.1_g194140 Hydrangea macrophylla HOM05D000294 ORTHO05D000177 2.9e-09 65.1 109 45.0
MBI18_g44048_MAGBIO Magnolia biondii HOM05D000294 ORTHO05D000177 2.9e-09 65.1 109 42.2
DCAR_003770 Daucus carota HOM05D000294 ORTHO05D000177 3.8e-09 64.7 106 44.3
CAN.G2053.1 Capsicum annuum HOM05D000294 ORTHO05D000177 5.0e-09 64.3 109 40.4
COL.COLO4_17633 Corchorus olitorius HOM05D000294 ORTHO05D000177 5.0e-09 64.3 102 40.2
CDE11G0571 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 6.5e-09 63.9 107 43.0
Sabra03G0046100 Salix brachista HOM05D000294 ORTHO05D000177 6.5e-09 63.9 99 44.4
Nitab4.5_0000443g0100 Nicotiana tabacum HOM05D000294 ORTHO05D000177 8.5e-09 63.5 109 39.4
Manes.16G052100 Manihot esculenta HOM05D000294 ORTHO05D000177 1.1e-08 63.2 108 38.0
Nn7g38277 Nelumbo nucifera HOM05D000294 ORTHO05D000177 1.1e-08 63.2 101 42.6
Dinv17499 Davidia involucrata HOM05D000294 ORTHO05D000177 1.5e-08 62.8 109 42.2
Potri.003G075600 Populus trichocarpa HOM05D000294 ORTHO05D000177 1.9e-08 62.4 99 43.4
RcHm_v2.0_Chr5g0020661 Rosa chinensis HOM05D000294 ORTHO05D000177 1.9e-08 62.4 107 42.1
Solyc02g068510.2 Solanum lycopersicum HOM05D000294 ORTHO05D000177 1.9e-08 62.4 108 40.7
CSS0005021 Camellia sinensis var. sinensis HOM05D000294 ORTHO05D000177 2.5e-08 62.0 109 38.5
FAN16G2025 Fragaria x ananassa HOM05D000294 ORTHO05D000177 2.5e-08 62.0 104 42.3
Potri.001G159200 Populus trichocarpa HOM05D000294 ORTHO05D000177 4.2e-08 61.2 108 40.7
GSVIVG01012125001 Vitis vinifera HOM05D000294 ORTHO05D000177 4.2e-08 61.2 105 39.0
CDE06G2754 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 5.5e-08 60.8 107 41.1
Nitab4.5_0006246g0030 Nicotiana tabacum HOM05D000294 ORTHO05D000177 5.5e-08 60.8 107 38.3
Ciclev10016385m.g Citrus clementina HOM05D000294 ORTHO05D000177 9.4e-08 60.1 107 41.1
Prupe.4G115600 Prunus persica HOM05D000294 ORTHO05D000177 1.2e-07 59.7 109 36.7
Peaxi162Scf00199g00612 Petunia axillaris HOM05D000294 ORTHO05D000177 1.6e-07 59.3 105 38.1
Rhsim13G0129000 Rhododendron simsii HOM05D000294 ORTHO05D000177 1.6e-07 59.3 109 42.2
MSTRG.16364 Avicennia marina HOM05D000294 ORTHO05D000177 2.1e-07 58.9 85 45.9
Sed0010860 Sechium edule HOM05D000294 ORTHO05D000177 2.1e-07 58.9 110 36.4
Sed0020569 Sechium edule HOM05D000294 ORTHO05D000177 3.6e-07 58.2 105 39.0
CiPaw.09G074100 Carya illinoinensis HOM05D000294 ORTHO05D000177 4.7e-07 57.8 108 38.9
Sabra01G0132700 Salix brachista HOM05D000294 ORTHO05D000177 4.7e-07 57.8 108 38.9
MD10G1229000 Malus domestica HOM05D000294 ORTHO05D000177 6.1e-07 57.4 109 35.8
CANSAT35G1247 Cannabis sativa HOM05D000294 ORTHO05D000177 1.0e-06 56.6 115 36.5
Cfa000668 Carpinus fangiana HOM05D000294 ORTHO05D000177 1.0e-06 56.6 106 36.8
ECA238G2136 Erigeron canadensis HOM05D000294 ORTHO05D000177 1.0e-06 56.6 105 38.1
Lsat_1_v5_gn_2_61160 Lactuca sativa HOM05D000294 ORTHO05D000177 1.0e-06 56.6 104 37.5
Haze_06151 Corylus avellana HOM05D000294 ORTHO05D000177 1.4e-06 56.2 106 37.7
Lj2A343G73 Lonicera japonica HOM05D000294 ORTHO05D000177 1.4e-06 56.2 110 37.3
PSO541G0894 Papaver somniferum HOM05D000294 ORTHO05D000177 1.4e-06 56.2 107 41.1
Thecc.02G005800 Theobroma cacao HOM05D000294 ORTHO05D000177 1.4e-06 56.2 108 34.3
TWI38G2334 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 1.4e-06 56.2 110 38.2
Duzib132G0190 Durio zibethinus HOM05D000294 ORTHO05D000177 1.8e-06 55.8 108 33.3
Eucgr.E04309 Eucalyptus grandis HOM05D000294 ORTHO05D000177 1.8e-06 55.8 98 42.9
Oeu056053.1 Olea europaea HOM05D000294 ORTHO05D000177 1.8e-06 55.8 106 39.6
Actinidia22424 Actinidia chinensis HOM05D000294 ORTHO05D000177 2.3e-06 55.5 109 38.5
SGA_v2.0_scaffold175G39351 Striga asiatica HOM05D000294 ORTHO05D000177 2.3e-06 55.5 92 41.3
Atru.chr10.415 Acer truncatum HOM05D000294 ORTHO05D000177 3.0e-06 55.1 105 35.2
ClCG03G004210 Citrullus lanatus HOM05D000294 ORTHO05D000177 3.0e-06 55.1 105 37.1
MD05G1248500 Malus domestica HOM05D000294 ORTHO05D000177 4.0e-06 54.7 108 35.2
Manes.03G075532 Manihot esculenta HOM05D000294 ORTHO05D000177 4.0e-06 54.7 104 38.5
QL11p013119 Quercus lobata HOM05D000294 ORTHO05D000177 4.0e-06 54.7 109 36.7
Manes.03G075500 Manihot esculenta HOM05D000294 ORTHO05D000177 6.8e-06 53.9 103 35.9
PSO675G4387 Papaver somniferum HOM05D000294 ORTHO05D000177 8.8e-06 53.5 111 38.7


User provided reference genes

Program Settings