Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001268 Daucus carota HOM05D005977 ORTHO05D007546 4.8e-27 123.6 57 100.0
DCAR_001274 Daucus carota HOM05D005977 ORTHO05D007546 7.6e-17 89.7 54 79.6
TWI73G0225 Tripterygium wilfordii HOM05D005977 ORTHO05D007546 1.2e-09 65.9 60 58.3
Lj1P1149T39 Lonicera japonica HOM05D005977 ORTHO05D007546 2.0e-09 65.1 58 55.2
MD10G1227400 Malus domestica HOM05D005977 ORTHO05D007546 2.0e-09 65.1 56 60.7
Glyma.05G134000 Glycine max HOM05D005977 ORTHO05D007546 2.6e-09 64.7 59 57.6
Glyma.08G088700 Glycine max HOM05D005977 ORTHO05D007546 2.6e-09 64.7 59 57.6
Potri.001G160900 Populus trichocarpa HOM05D005977 ORTHO05D007546 2.6e-09 64.7 62 56.5
VMungo0251G1017 Vigna mungo HOM05D005977 ORTHO05D007546 2.6e-09 64.7 59 57.6
Lalb_Chr12g0209141 Lupinus albus HOM05D005977 ORTHO05D007546 4.5e-09 63.9 59 55.9
Atru.chr10.318 Acer truncatum HOM05D005977 ORTHO05D007546 1.0e-08 62.8 68 54.4
Atru.chr10.348 Acer truncatum HOM05D005977 ORTHO05D007546 1.0e-08 62.8 68 54.4
Cc09_g05180 Coffea canephora HOM05D005977 ORTHO05D007546 1.7e-08 62.0 65 52.3
Prupe.4G117600 Prunus persica HOM05D005977 ORTHO05D007546 1.7e-08 62.0 56 58.9
Prupe.4G117800 Prunus persica HOM05D005977 ORTHO05D007546 1.7e-08 62.0 56 58.9
Phvul.002G188300 Phaseolus vulgaris HOM05D005977 ORTHO05D007546 2.2e-08 61.6 59 55.9
Ciclev10017846m.g Citrus clementina HOM05D005977 ORTHO05D007546 2.9e-08 61.2 68 51.5
arahy.Tifrunner.gnm1.ann1.GTY4NG Arachis hypogaea HOM05D005977 ORTHO05D007546 3.8e-08 60.8 63 50.8
arahy.Tifrunner.gnm1.ann1.N7CMLX Arachis hypogaea HOM05D005977 ORTHO05D007546 5.0e-08 60.5 63 49.2
Lalb_Chr13g0293451 Lupinus albus HOM05D005977 ORTHO05D007546 5.0e-08 60.5 59 52.5
MD05G1246800 Malus domestica HOM05D005977 ORTHO05D007546 5.0e-08 60.5 56 57.1
QL11p012250 Quercus lobata HOM05D005977 ORTHO05D007546 5.0e-08 60.5 67 50.7
TPR.G23831 Trifolium pratense HOM05D005977 ORTHO05D007546 5.0e-08 60.5 55 54.5
Lj4g0026547 Lotus japonicus HOM05D005977 ORTHO05D007546 6.5e-08 60.1 59 52.5
Psat7g088280 Pisum sativum HOM05D005977 ORTHO05D007546 6.5e-08 60.1 55 54.5
Manes.13G079162 Manihot esculenta HOM05D005977 ORTHO05D007546 1.1e-07 59.3 66 50.0
Thecc.02G004000 Theobroma cacao HOM05D005977 ORTHO05D007546 1.1e-07 59.3 65 50.8
CANSAT35G0189 Cannabis sativa HOM05D005977 ORTHO05D007546 1.9e-07 58.5 56 53.6
CiPaw.10G105300 Carya illinoinensis HOM05D005977 ORTHO05D007546 1.9e-07 58.5 62 51.6
Sabra01G0131400 Salix brachista HOM05D005977 ORTHO05D007546 1.9e-07 58.5 58 55.2
CSS0018053 Camellia sinensis var. sinensis HOM05D005977 ORTHO05D007546 2.5e-07 58.2 64 48.4
CiPaw.09G137800 Carya illinoinensis HOM05D005977 ORTHO05D007546 2.5e-07 58.2 69 50.7
Medtr4g094748 Medicago truncatula HOM05D005977 ORTHO05D007546 3.2e-07 57.8 55 52.7
Rhsim02G0171300 Rhododendron simsii HOM05D005977 ORTHO05D007546 5.5e-07 57.0 71 45.1
SalBow8G5618 Salvia bowleyana HOM05D005977 ORTHO05D007546 5.5e-07 57.0 59 45.8
RcHm_v2.0_Chr5g0021071 Rosa chinensis HOM05D005977 ORTHO05D007546 7.2e-07 56.6 58 53.4
Cfa001126 Carpinus fangiana HOM05D005977 ORTHO05D007546 9.4e-07 56.2 60 55.0
Haze_05266 Corylus avellana HOM05D005977 ORTHO05D007546 9.4e-07 56.2 60 55.0
Lsat_1_v5_gn_8_106861 Lactuca sativa HOM05D005977 ORTHO05D007546 9.4e-07 56.2 50 60.0
SHI24793 Sapria himalayana HOM05D005977 ORTHO05D007546 1.2e-06 55.8 66 47.0
FvH4_3g12960 Fragaria vesca HOM05D005977 ORTHO05D007546 1.6e-06 55.5 58 53.4
FAN11G3762 Fragaria x ananassa HOM05D005977 ORTHO05D007546 1.6e-06 55.5 58 53.4
FAN25G0244 Fragaria x ananassa HOM05D005977 ORTHO05D007546 2.1e-06 55.1 58 51.7
Aa31LG9G16240 Aethionema arabicum HOM05D005977 ORTHO05D007546 2.7e-06 54.7 69 40.6
ECA232G4918 Erigeron canadensis HOM05D005977 ORTHO05D007546 2.7e-06 54.7 61 52.5
GSVIVG01012147001 Vitis vinifera HOM05D005977 ORTHO05D007546 2.7e-06 54.7 68 47.1
FAN16G0144 Fragaria x ananassa HOM05D005977 ORTHO05D007546 3.6e-06 54.3 58 53.4
FAN21G3750 Fragaria x ananassa HOM05D005977 ORTHO05D007546 3.6e-06 54.3 58 53.4
Duzib132G1078 Durio zibethinus HOM05D005977 ORTHO05D007546 4.7e-06 53.9 65 46.2
PGR042G0935 Punica granatum HOM05D005977 ORTHO05D007546 4.7e-06 53.9 67 49.3
vmacro11018 Vaccinium macrocarpon HOM05D005977 ORTHO05D007546 6.1e-06 53.5 75 40.0
Eucgr.E04314 Eucalyptus grandis HOM05D005977 ORTHO05D007546 7.9e-06 53.1 68 47.1
HanXRQChr09g0257841 Helianthus annuus HOM05D005977 ORTHO05D007546 7.9e-06 53.1 48 58.3
Lsat_1_v5_gn_8_106881 Lactuca sativa HOM05D005977 ORTHO05D007546 7.9e-06 53.1 50 56.0


User provided reference genes

Program Settings