Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 3.8e-38 161.0 80 100.0
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 2.2e-33 145.2 76 89.5
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 2.2e-33 145.2 78 88.5
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 9.0e-32 139.8 77 84.4
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 4.5e-31 137.5 76 84.2
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 5.9e-31 137.1 77 83.1
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 1.7e-30 135.6 76 81.6
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 2.9e-30 134.8 77 77.9
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 5.0e-30 134.0 78 79.5
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 6.5e-30 133.7 76 81.6
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 8.5e-30 133.3 76 81.6
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 1.1e-29 132.9 76 80.3
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.1e-29 132.9 79 77.2
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 1.1e-29 132.9 76 78.9
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 1.4e-29 132.5 76 81.6
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 1.9e-29 132.1 76 81.6
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.9e-29 132.1 76 78.9
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 1.9e-29 132.1 76 80.3
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 2.5e-29 131.7 77 79.2
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.5e-29 131.7 79 75.9
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 2.5e-29 131.7 76 81.6
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 2.5e-29 131.7 78 78.2
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 3.2e-29 131.3 79 75.9
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 3.2e-29 131.3 78 78.2
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 5.5e-29 130.6 76 78.9
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 7.2e-29 130.2 76 80.3
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 7.2e-29 130.2 78 75.6
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 7.2e-29 130.2 78 75.6
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 7.2e-29 130.2 76 78.9
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 7.2e-29 130.2 77 79.2
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 7.2e-29 130.2 77 79.2
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 7.2e-29 130.2 76 77.6
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.2e-28 129.4 77 76.6
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 1.2e-28 129.4 79 74.7
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 1.6e-28 129.0 77 76.6
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 1.6e-28 129.0 76 77.6
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 2.1e-28 128.6 79 74.7
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 2.1e-28 128.6 79 74.7
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 2.1e-28 128.6 76 78.9
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 2.1e-28 128.6 76 76.3
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 2.1e-28 128.6 76 77.6
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 2.1e-28 128.6 75 81.3
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 2.7e-28 128.3 75 78.7
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 2.7e-28 128.3 76 78.9
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 2.7e-28 128.3 76 77.6
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 3.6e-28 127.9 77 75.3
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 3.6e-28 127.9 76 77.6
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 3.6e-28 127.9 76 76.3
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 3.6e-28 127.9 76 76.3
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 4.6e-28 127.5 77 76.6
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 4.6e-28 127.5 77 79.2
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 76.3
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 76.3
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 76.3
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 76.3
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 76.3
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 4.6e-28 127.5 77 77.9
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 4.6e-28 127.5 76 77.6
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 6.1e-28 127.1 77 75.3
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 6.1e-28 127.1 78 74.4
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 6.1e-28 127.1 77 75.3
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 6.1e-28 127.1 76 77.6
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 6.1e-28 127.1 76 77.6
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 6.1e-28 127.1 76 76.3
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 6.1e-28 127.1 76 76.3
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 6.1e-28 127.1 72 81.9
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 6.1e-28 127.1 79 73.4
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 7.9e-28 126.7 75 78.7
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 7.9e-28 126.7 76 76.3
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 7.9e-28 126.7 76 77.6
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 1.0e-27 126.3 75 78.7
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 1.0e-27 126.3 78 74.4
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 1.0e-27 126.3 75 77.3
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 1.0e-27 126.3 75 77.3
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.0e-27 126.3 76 76.3
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 1.0e-27 126.3 75 78.7
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 1.0e-27 126.3 76 76.3
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 1.0e-27 126.3 76 76.3
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 1.4e-27 125.9 76 76.3
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 1.4e-27 125.9 76 76.3
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 1.4e-27 125.9 76 76.3
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 1.4e-27 125.9 75 77.3
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.4e-27 125.9 76 75.0
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 75.0
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 75.0
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 75.0
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 75.0
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 75.0
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 1.8e-27 125.6 75 76.0
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 1.8e-27 125.6 76 76.3
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 2.3e-27 125.2 75 80.0
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 2.3e-27 125.2 76 76.3
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 3.0e-27 124.8 76 75.0
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 3.0e-27 124.8 75 80.0
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 3.0e-27 124.8 76 76.3
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 3.0e-27 124.8 76 75.0
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 5.1e-27 124.0 70 81.4
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 6.7e-27 123.6 76 75.0
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 8.8e-27 123.2 72 77.8
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 8.8e-27 123.2 72 77.8
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 75.0
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 73.7
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 73.7
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 73.7
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 73.7
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.1e-26 122.9 76 73.7
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 1.5e-26 122.5 76 73.7
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.5e-26 122.5 75 74.7
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 2.0e-26 122.1 76 72.4
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 2.0e-26 122.1 77 72.7
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 2.5e-26 121.7 75 74.7
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 3.3e-26 121.3 79 72.2
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 7.4e-26 120.2 75 73.3
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 7.4e-26 120.2 75 74.7
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 7.4e-26 120.2 72 76.4
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 2.8e-25 118.2 76 69.7
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 8.2e-25 116.7 75 69.3
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.1e-24 116.3 76 71.1
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 1.8e-24 115.5 76 71.1
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 4.1e-24 114.4 76 68.4
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 2.6e-23 111.7 76 69.7
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 3.4e-23 111.3 73 71.2
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 1.0e-22 109.8 70 71.4
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 1.1e-21 106.3 78 61.5
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.1e-21 106.3 76 61.8
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 3.2e-21 104.8 77 62.3
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 4.2e-21 104.4 77 61.0
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 6.1e-20 100.5 76 56.6
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 1.5e-18 95.9 77 58.4
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 2.8e-17 91.7 77 53.2
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 5.9e-15 84.0 74 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 1.3e-14 82.8 75 48.0
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 3.2e-13 78.2 50 66.0
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.7e-12 75.1 69 58.0
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 2.7e-12 75.1 68 50.0
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 8.0e-12 73.6 51 68.6
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 9.7e-10 66.6 41 70.7
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 2.7e-07 58.5 39 66.7
Nitab4.5_0000217g0090 Nicotiana tabacum HOM05D005477 ORTHO05D006721 5.0e-06 54.3 40 55.0


User provided reference genes

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