Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 4.1e-226 787.7 394 100.0
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.2e-98 361.7 418 52.9
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 1.2e-95 354.4 425 54.8
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 5.7e-95 352.1 400 52.8
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 5.3e-93 345.5 412 52.9
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 7.2e-90 335.1 429 51.7
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.4e-88 330.9 427 51.3
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.6e-87 326.6 428 51.2
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 2.6e-87 326.6 428 51.2
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 4.8e-86 322.4 427 50.1
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 4.8e-86 322.4 420 50.0
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 6.3e-86 322.0 399 51.4
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 3.5e-84 316.2 422 50.5
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 8.6e-83 311.6 427 49.2
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.0e-81 305.1 429 49.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.4e-77 294.3 415 48.2
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 2.4e-77 293.5 429 47.6
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.4e-77 293.5 411 47.9
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.0e-76 290.4 427 47.5
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 2.7e-76 290.0 406 47.3
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 2.7e-76 290.0 424 49.5
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 3.5e-76 289.7 432 48.8
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 5.9e-76 288.9 428 47.9
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.3e-75 287.7 461 46.4
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 3.8e-75 286.2 384 52.1
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.5e-74 284.3 429 46.9
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.3e-74 283.1 418 46.9
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 5.6e-74 282.3 432 46.5
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 9.5e-74 281.6 430 46.3
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.2e-73 281.2 429 46.9
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 4.7e-73 279.3 368 49.5
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.4e-71 273.1 397 47.6
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 5.8e-71 272.3 427 46.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.7e-70 270.8 440 45.7
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 2.2e-70 270.4 400 48.0
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 5.4e-69 265.8 427 43.1
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 5.4e-69 265.8 417 45.8
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 6.0e-68 262.3 388 45.6
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 3.9e-67 259.6 426 45.5
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 2.5e-66 256.9 409 45.2
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.5e-66 256.9 394 46.2
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.6e-66 255.8 399 44.6
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 9.5e-66 255.0 408 44.6
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 9.5e-66 255.0 378 47.6
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 1.2e-65 254.6 407 42.8
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.6e-65 254.2 388 46.4
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.1e-64 251.5 408 45.1
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.4e-64 251.1 388 44.8
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.3e-64 250.4 408 44.1
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 1.7e-62 244.2 384 42.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 2.9e-62 243.4 403 43.7
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 2.9e-62 243.4 377 46.4
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.4e-61 241.1 392 44.4
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 2.4e-61 240.4 304 53.0
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 3.0e-59 233.4 389 45.0
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 2.8e-57 226.9 486 39.7
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 6.2e-57 225.7 389 42.9
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 1.1e-56 224.9 427 41.0
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.2e-55 221.5 464 42.0
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 5.8e-55 219.2 393 43.0
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 1.3e-54 218.0 388 41.5
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 2.9e-54 216.9 403 42.2
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 8.3e-54 215.3 475 39.6
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 5.4e-53 212.6 328 47.0
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 2.1e-52 210.7 403 40.7
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 3.0e-51 206.8 331 46.2
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.6e-50 202.6 421 38.0
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 1.2e-49 201.4 400 39.8
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 1.4e-45 188.0 291 42.3
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 3.5e-44 183.3 290 43.1
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 6.0e-44 182.6 470 37.4
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 3.0e-43 180.3 415 38.1
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 3.0e-43 180.3 448 36.2
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.9e-43 179.9 334 42.2
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.9e-42 177.6 381 40.2
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.9e-42 177.6 452 36.3
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.3e-42 176.4 405 37.8
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.2e-41 174.9 161 54.7
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.6e-41 173.3 384 37.8
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 4.7e-41 172.9 379 36.1
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 3.1e-40 170.2 382 37.2
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 5.3e-40 169.5 393 36.4
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 6.4e-38 162.5 338 37.0
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 3.2e-37 160.2 330 42.4
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 6.0e-36 156.0 323 36.2
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.5e-34 151.4 378 35.4
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.9e-34 151.0 390 34.6
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 3.3e-34 150.2 362 40.1
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 1.6e-33 147.9 378 34.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 2.1e-33 147.5 401 35.4
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 2.8e-33 147.1 231 43.3
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 4.8e-33 146.4 373 33.0
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 6.2e-33 146.0 394 35.8
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 5.3e-32 142.9 265 41.9
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 2.6e-31 140.6 240 42.9
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 2.4e-29 134.0 325 33.8
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.3e-27 127.5 158 56.3
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 6.7e-27 125.9 380 34.5
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.3e-25 121.7 165 46.1
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.1e-24 118.6 113 54.0
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.3e-24 116.3 360 32.5
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 9.0e-24 115.5 138 56.5
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 2.6e-23 114.0 309 34.6
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 5.8e-23 112.8 326 32.2
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 5.8e-23 112.8 317 33.4
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 7.6e-23 112.5 326 32.2
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 7.6e-23 112.5 326 32.2
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 9.9e-23 112.1 396 31.3
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 9.9e-23 112.1 330 33.3
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 9.9e-23 112.1 330 33.3
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.7e-22 111.3 286 35.0
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 2.9e-22 110.5 329 32.2
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 6.4e-22 109.4 311 34.4
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 6.4e-22 109.4 385 31.7
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 6.4e-22 109.4 385 31.7
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 9.3e-21 105.5 274 33.2
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 1.6e-20 104.8 305 30.5
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 2.1e-20 104.4 381 30.2
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.0e-19 102.1 307 34.2
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 5.1e-19 99.8 327 32.1
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 6.7e-19 99.4 324 30.9
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 8.7e-19 99.0 325 31.1
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.5e-18 98.2 377 30.0
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.9e-18 97.8 303 31.7
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 2.5e-18 97.4 386 28.8
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 3.3e-18 97.1 324 30.6
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-17 95.1 112 48.2
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 3.7e-17 93.6 318 31.1
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 3.7e-17 93.6 318 31.1
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 4.8e-17 93.2 317 30.6
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 4.8e-17 93.2 188 41.5
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 8.2e-17 92.4 390 30.0
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 1.4e-16 91.7 403 30.5
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.8e-16 91.3 293 31.7
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 5.3e-16 89.7 462 26.4
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 1.2e-15 88.6 326 34.0
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 5.8e-15 86.3 278 30.6
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.0e-14 85.5 168 44.6
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.7e-14 84.7 321 34.0
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 3.8e-14 83.6 351 29.9
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 2.5e-13 80.9 423 26.7
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 3.2e-13 80.5 375 29.1
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 7.1e-13 79.3 301 31.6
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.2e-12 78.6 329 32.5
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.3e-11 75.1 402 26.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 2.3e-11 74.3 47 83.0
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 2.6e-07 60.8 342 26.0
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 2.2e-06 57.8 72 52.8


User provided reference genes

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