Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001217 Daucus carota HOM05D003587 ORTHO05D004139 1.8e-35 152.1 80 100.0
DCAR_019108 Daucus carota HOM05D003587 ORTHO05D007145 1.6e-20 102.4 57 91.2
Gohir.D13G022900 Gossypium hirsutum HOM05D003587 ORTHO05D004139 2.8e-17 91.7 70 62.9
Gorai.013G025600 Gossypium raimondii HOM05D003587 ORTHO05D004139 2.8e-17 91.7 70 62.9
Lj1A914G42 Lonicera japonica HOM05D003587 ORTHO05D004139 2.8e-17 91.7 70 64.3
Gohir.A13G024000 Gossypium hirsutum HOM05D003587 ORTHO05D004139 4.8e-17 90.9 70 62.9
Dinv11778 Davidia involucrata HOM05D003587 ORTHO05D004139 6.3e-17 90.5 81 54.3
COL.COLO4_23687 Corchorus olitorius HOM05D003587 ORTHO05D004139 8.2e-17 90.1 73 63.0
Thecc.10G072900 Theobroma cacao HOM05D003587 ORTHO05D004139 8.2e-17 90.1 70 64.3
Ciclev10031308m.g Citrus clementina HOM05D003587 ORTHO05D004139 1.1e-16 89.7 63 66.7
Manes.10G045400 Manihot esculenta HOM05D003587 ORTHO05D004139 1.1e-16 89.7 70 62.9
Atru.BG.272.p Acer truncatum HOM05D003587 ORTHO05D004139 1.4e-16 89.4 70 62.9
Oeu027482.2 Olea europaea HOM05D003587 ORTHO05D004139 1.4e-16 89.4 70 64.3
Atru.chr12.764 Acer truncatum HOM05D003587 ORTHO05D004139 2.4e-16 88.6 70 62.9
Hma1.2p1_1004F.1_g246830 Hydrangea macrophylla HOM05D003587 ORTHO05D004139 2.4e-16 88.6 70 61.4
Sabra10G0171700 Salix brachista HOM05D003587 ORTHO05D004139 2.4e-16 88.6 70 64.3
TWI15G0175 Tripterygium wilfordii HOM05D003587 ORTHO05D004139 3.1e-16 88.2 63 63.5
Rhsim03G0120900 Rhododendron simsii HOM05D003587 ORTHO05D004139 5.3e-16 87.4 63 60.3
Potri.010G221900 Populus trichocarpa HOM05D003587 ORTHO05D004139 7.0e-16 87.0 70 61.4
Actinidia38276 Actinidia chinensis HOM05D003587 ORTHO05D004139 9.1e-16 86.7 70 58.6
ECA238G1416 Erigeron canadensis HOM05D003587 ORTHO05D004139 2.0e-15 85.5 70 61.4
CiPaw.01G273300 Carya illinoinensis HOM05D003587 ORTHO05D004139 3.5e-15 84.7 70 58.6
vmacro07076 Vaccinium macrocarpon HOM05D003587 ORTHO05D004139 4.5e-15 84.3 70 55.7
Cfa021506 Carpinus fangiana HOM05D003587 ORTHO05D004139 5.9e-15 84.0 63 60.3
CSS0029358 Camellia sinensis var. sinensis HOM05D003587 ORTHO05D004139 7.7e-15 83.6 70 54.3
Nn2g10780 Nelumbo nucifera HOM05D003587 ORTHO05D004139 7.7e-15 83.6 80 51.2
Cc09_g02070 Coffea canephora HOM05D003587 ORTHO05D004139 1.3e-14 82.8 70 58.6
Lsat_1_v5_gn_2_114281 Lactuca sativa HOM05D003587 ORTHO05D004139 1.3e-14 82.8 70 60.0
PGR142G0620 Punica granatum HOM05D003587 ORTHO05D004139 1.3e-14 82.8 80 51.2
HanXRQChr01g0011501 Helianthus annuus HOM05D003587 ORTHO05D004139 2.9e-14 81.6 70 58.6
GSVIVG01016284001 Vitis vinifera HOM05D003587 ORTHO05D004139 3.8e-14 81.3 63 58.7
Eucgr.G02826 Eucalyptus grandis HOM05D003587 ORTHO05D004139 5.0e-14 80.9 70 55.7
PSO384G5085 Papaver somniferum HOM05D003587 ORTHO05D004139 5.0e-14 80.9 80 50.0
PSO339G3050 Papaver somniferum HOM05D003587 ORTHO05D004139 8.5e-14 80.1 80 50.0
QL08p056026 Quercus lobata HOM05D003587 ORTHO05D004139 8.5e-14 80.1 63 55.6
CAN.G1099.11 Capsicum annuum HOM05D003587 ORTHO05D004139 1.1e-13 79.7 70 57.1
Lalb_Chr19g0129681 Lupinus albus HOM05D003587 ORTHO05D004139 1.1e-13 79.7 81 54.3
Migut.F01778 Erythranthe guttata HOM05D003587 ORTHO05D004139 1.5e-13 79.3 63 60.3
FvH4_7g19650 Fragaria vesca HOM05D003587 ORTHO05D004139 1.5e-13 79.3 70 54.3
FAN01G2474 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.5e-13 79.3 70 54.3
FAN06G4872 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.5e-13 79.3 70 54.3
Nitab4.5_0000575g0260 Nicotiana tabacum HOM05D003587 ORTHO05D004139 2.5e-13 78.6 80 50.0
Nitab4.5_0010934g0010 Nicotiana tabacum HOM05D003587 ORTHO05D004139 2.5e-13 78.6 80 51.2
Prupe.2G214200 Prunus persica HOM05D003587 ORTHO05D004139 2.5e-13 78.6 70 54.3
Peaxi162Scf00809g00432 Petunia axillaris HOM05D003587 ORTHO05D004139 3.2e-13 78.2 80 48.8
SalBow3G0063 Salvia bowleyana HOM05D003587 ORTHO05D004139 4.2e-13 77.8 70 57.1
Solyc04g049340.3 Solanum lycopersicum HOM05D003587 ORTHO05D004139 4.2e-13 77.8 70 52.9
FAN10G2586 Fragaria x ananassa HOM05D003587 ORTHO05D004139 5.5e-13 77.4 70 54.3
FAN10G4213 Fragaria x ananassa HOM05D003587 ORTHO05D004139 5.5e-13 77.4 70 54.3
PGSC0003DMG400024391 Solanum tuberosum HOM05D003587 ORTHO05D004139 5.5e-13 77.4 56 66.1
TAR633G2007 Trochodendron aralioides HOM05D003587 ORTHO05D004139 5.5e-13 77.4 63 55.6
MSTRG.8154 Avicennia marina HOM05D003587 ORTHO05D004139 7.2e-13 77.0 70 57.1
MD07G1175000 Malus domestica HOM05D003587 ORTHO05D004139 7.2e-13 77.0 70 54.3
RcHm_v2.0_Chr1g0363461 Rosa chinensis HOM05D003587 ORTHO05D004139 7.2e-13 77.0 70 52.9
Sopen04g019250 Solanum pennellii HOM05D003587 ORTHO05D004139 1.2e-12 76.3 70 52.9
Glyma.16G154700 Glycine max HOM05D003587 ORTHO05D004139 6.1e-12 73.9 70 51.4
Aqoxy3G02282_Aqoxy3G02283 Aquilegia oxysepala HOM05D003587 ORTHO05D004139 8.0e-12 73.6 63 55.6
arahy.Tifrunner.gnm1.ann1.3IGY6I Arachis hypogaea HOM05D003587 ORTHO05D004139 8.0e-12 73.6 81 48.1
arahy.Tifrunner.gnm1.ann1.TJZR4S Arachis hypogaea HOM05D003587 ORTHO05D004139 8.0e-12 73.6 81 48.1
ClCG08G007470 Citrullus lanatus HOM05D003587 ORTHO05D004139 8.0e-12 73.6 63 58.7
ATR0115G029 Amborella trichopoda HOM05D003587 ORTHO05D004139 1.8e-11 72.4 80 46.2
VMungo0464G0799 Vigna mungo HOM05D003587 ORTHO05D004139 3.0e-11 71.6 70 50.0
CDE05G3302 Ceratophyllum demersum HOM05D003587 ORTHO05D004139 5.2e-11 70.9 81 46.9
Phvul.004G082300 Phaseolus vulgaris HOM05D003587 ORTHO05D004139 6.7e-11 70.5 70 48.6
MELO3C019793.2 Cucumis melo HOM05D003587 ORTHO05D004139 2.0e-10 68.9 63 55.6
CsaV3_6G036380 Cucumis sativus L. HOM05D003587 ORTHO05D004139 2.0e-10 68.9 63 55.6
Lj5g0014900 Lotus japonicus HOM05D003587 ORTHO05D004139 2.6e-10 68.6 70 48.6
Haze_16897 Corylus avellana HOM05D003587 ORTHO05D004139 4.8e-09 64.3 46 65.2
SEGI_26742 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 5.3e-08 60.8 79 43.0
SEGI_29926 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 5.3e-08 60.8 79 43.0
Sed0006152 Sechium edule HOM05D003587 ORTHO05D004139 7.0e-08 60.5 70 47.1


User provided reference genes

Program Settings