Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 2.7e-86 322.0 166 100.0
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 6.0e-62 241.1 173 72.8
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 3.0e-61 238.8 171 74.9
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 5.1e-61 238.0 175 73.7
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 1.5e-60 236.5 177 72.9
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 1.9e-60 236.1 172 73.3
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 3.3e-60 235.3 176 73.3
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 9.6e-60 233.8 179 70.9
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.6e-59 233.0 175 71.4
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.8e-59 232.3 176 72.2
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 2.8e-59 232.3 167 74.3
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 2.8e-59 232.3 175 70.9
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.6e-59 231.9 176 72.2
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 3.6e-59 231.9 175 70.9
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 4.7e-59 231.5 178 71.9
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 4.7e-59 231.5 175 71.4
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 1.8e-58 229.6 172 70.3
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 3.1e-58 228.8 175 70.9
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 5.2e-58 228.0 175 70.9
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 8.9e-58 227.3 177 69.5
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 1.5e-57 226.5 177 69.5
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 2.6e-57 225.7 177 68.9
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 2.6e-57 225.7 172 72.7
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 3.4e-57 225.3 178 69.7
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.4e-57 225.3 183 69.4
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 4.4e-57 224.9 173 69.9
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 4.4e-57 224.9 175 70.3
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 5.8e-57 224.6 175 70.3
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 7.6e-57 224.2 178 69.7
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 9.9e-57 223.8 176 69.3
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.3e-56 223.4 172 70.9
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 1.3e-56 223.4 171 70.2
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.7e-56 223.0 178 68.5
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.8e-56 221.9 177 70.1
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 3.8e-56 221.9 175 69.7
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 6.4e-56 221.1 178 68.0
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 8.4e-56 220.7 172 69.8
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 1.1e-55 220.3 178 66.3
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 1.9e-55 219.5 175 69.1
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 4.2e-55 218.4 172 68.0
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 4.2e-55 218.4 167 71.3
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 9.3e-55 217.2 177 68.9
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.2e-54 216.9 172 66.3
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 2.7e-54 215.7 172 69.2
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 2.7e-54 215.7 177 67.8
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 2.7e-54 215.7 178 68.0
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 3.5e-54 215.3 170 68.2
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 6.0e-54 214.5 167 70.1
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 7.8e-54 214.2 173 68.2
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 7.8e-54 214.2 173 69.9
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 1.0e-53 213.8 168 69.0
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 1.3e-53 213.4 173 67.6
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.3e-53 213.4 174 66.1
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 2.3e-53 212.6 173 68.8
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 3.9e-53 211.8 174 67.2
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 3.9e-53 211.8 173 66.5
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 3.9e-53 211.8 177 64.4
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 8.7e-53 210.7 169 66.9
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 8.7e-53 210.7 174 66.7
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 1.1e-52 210.3 174 67.8
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 1.5e-52 209.9 172 66.9
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 1.5e-52 209.9 170 67.1
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 1.5e-52 209.9 170 67.1
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.9e-52 209.5 177 63.8
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 1.9e-52 209.5 171 69.0
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 2.5e-52 209.1 174 66.7
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 3.3e-52 208.8 178 64.6
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 4.3e-52 208.4 169 66.3
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 4.3e-52 208.4 171 64.9
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 5.6e-52 208.0 171 64.9
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 9.6e-52 207.2 176 65.9
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 9.6e-52 207.2 176 65.9
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 9.6e-52 207.2 172 65.1
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 9.6e-52 207.2 173 67.1
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 9.6e-52 207.2 173 65.3
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.3e-51 206.8 168 69.6
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.3e-51 206.8 168 69.6
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 1.6e-51 206.5 172 64.5
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 1.6e-51 206.5 173 65.9
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 1.6e-51 206.5 173 65.9
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 2.1e-51 206.1 169 69.2
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 3.6e-51 205.3 176 65.3
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-51 205.3 173 65.9
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-51 205.3 173 65.9
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 6.2e-51 204.5 178 63.5
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 1.4e-50 203.4 175 66.3
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 1.8e-50 203.0 166 68.7
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 4.0e-50 201.8 180 62.2
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 4.0e-50 201.8 178 62.9
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 6.9e-50 201.1 173 64.2
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 6.9e-50 201.1 176 65.3
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 2.6e-49 199.1 173 64.2
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 7.6e-49 197.6 175 65.7
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 9.9e-49 197.2 168 68.5
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 1.3e-48 196.8 171 66.7
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 1.7e-48 196.4 168 65.5
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 2.2e-48 196.1 173 63.0
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 2.9e-48 195.7 142 71.1
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 6.4e-48 194.5 173 63.0
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 3.2e-47 192.2 174 63.2
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 3.2e-47 192.2 174 63.2
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 5.4e-47 191.4 174 63.2
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 1.2e-46 190.3 174 60.9
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 1.6e-46 189.9 184 59.8
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 1.6e-46 189.9 171 60.2
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 3.5e-46 188.7 175 61.7
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 6.0e-46 188.0 167 59.3
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 1.0e-45 187.2 169 59.8
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 2.5e-44 182.6 128 72.7
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 2.5e-44 182.6 167 58.1
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 1.3e-43 180.3 169 58.0
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 1.6e-43 179.9 177 60.5
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 1.6e-43 179.9 169 59.8
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 4.0e-42 175.3 144 63.9
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 9.0e-42 174.1 146 61.0
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 1.2e-41 173.7 137 67.2
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 8.4e-40 167.5 146 68.5
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 2.7e-38 162.5 146 63.7
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 1.0e-37 160.6 173 56.6
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 1.0e-37 160.6 173 56.6
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 1.0e-37 160.6 144 57.6
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 6.7e-37 157.9 146 65.8
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 1.2e-33 147.1 144 63.2
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 3.4e-33 145.6 143 62.2
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 1.4e-31 140.2 82 73.2
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 1.9e-31 139.8 143 60.1
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 9.6e-28 127.5 129 62.8
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 6.2e-27 124.8 74 79.7
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 1.4e-26 123.6 74 78.4
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 1.8e-26 123.2 72 80.6
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 3.1e-26 122.5 74 78.4
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 4.0e-26 122.1 120 54.2
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 2.2e-24 116.3 170 45.9
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 3.2e-23 112.5 130 48.5
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 8.2e-19 97.8 74 64.9
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 8.2e-19 97.8 120 50.8
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 9.0e-18 94.4 104 60.6
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 5.9e-17 91.7 96 55.2
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 1.8e-13 80.1 107 55.1
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 2.3e-13 79.7 136 41.2
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 8.8e-13 77.8 78 53.8
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 1.1e-12 77.4 140 40.7
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 4.8e-11 72.0 117 50.4
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.2e-09 67.4 104 51.9
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 2.5e-07 59.7 102 48.0
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 2.5e-07 59.7 30 80.0


User provided reference genes

Program Settings