Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 7.1e-27 123.2 65 100.0
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 9.6e-24 112.8 65 86.2
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 9.6e-24 112.8 65 92.3
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 8.1e-23 109.8 64 85.9
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.4e-22 108.2 65 84.6
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 4.0e-22 107.5 65 81.5
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 4.0e-22 107.5 65 84.6
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 6.9e-22 106.7 65 84.6
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 6.9e-22 106.7 64 85.9
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-21 105.5 63 84.1
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-21 105.5 63 84.1
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.5e-21 105.5 65 81.5
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.0e-21 105.1 65 81.5
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.6e-21 104.8 63 82.5
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 2.6e-21 104.8 64 82.8
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.5e-21 104.0 63 85.7
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 4.5e-21 104.0 64 82.8
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 7.6e-21 103.2 65 81.5
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 7.6e-21 103.2 65 80.0
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 7.6e-21 103.2 64 81.2
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.6e-21 103.2 64 81.2
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.0e-20 102.8 65 80.0
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.0e-20 102.8 65 83.1
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-20 102.4 64 82.8
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-20 102.4 64 82.8
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.3e-20 102.4 65 81.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.3e-20 102.4 65 78.5
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.3e-20 102.4 65 81.5
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.7e-20 102.1 64 79.7
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.7e-20 102.1 64 82.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.7e-20 102.1 65 78.5
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.7e-20 102.1 64 81.2
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.7e-20 102.1 64 81.2
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.2e-20 101.7 64 81.2
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 2.2e-20 101.7 65 80.0
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.9e-20 101.3 65 78.5
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 2.9e-20 101.3 65 80.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.9e-20 101.3 65 78.5
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 2.9e-20 101.3 65 81.5
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 3.8e-20 100.9 65 78.5
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 3.8e-20 100.9 65 78.5
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 3.8e-20 100.9 65 78.5
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 4.9e-20 100.5 65 80.0
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 4.9e-20 100.5 65 76.9
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.5e-20 100.1 64 81.2
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 6.5e-20 100.1 65 76.9
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 8.4e-20 99.8 65 78.5
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 8.4e-20 99.8 65 76.9
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.1e-19 99.4 65 80.0
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.1e-19 99.4 65 75.4
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.1e-19 99.4 65 78.5
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.1e-19 99.4 65 78.5
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.1e-19 99.4 65 75.4
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.4e-19 99.0 64 81.2
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.4e-19 99.0 64 81.2
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.4e-19 99.0 64 79.7
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 1.9e-19 98.6 65 78.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 2.5e-19 98.2 65 78.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.5e-19 98.2 65 75.4
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 4.2e-19 97.4 64 78.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 4.2e-19 97.4 63 73.0
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 5.5e-19 97.1 65 76.9
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.5e-19 97.1 65 76.9
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.1e-19 96.7 64 73.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 7.1e-19 96.7 65 75.4
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 7.1e-19 96.7 65 75.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 7.1e-19 96.7 65 75.4
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.3e-19 96.3 63 76.2
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.3e-19 96.3 65 76.9
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.3e-19 96.3 65 76.9
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 9.3e-19 96.3 65 78.5
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 9.3e-19 96.3 65 75.4
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.2e-18 95.9 65 75.4
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.2e-18 95.9 64 76.6
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 1.2e-18 95.9 58 81.0
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.6e-18 95.5 65 76.9
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.6e-18 95.5 65 73.8
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.1e-18 95.1 65 72.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.1e-18 95.1 65 73.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 73.8
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 72.3
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 72.3
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 72.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 72.3
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.7e-18 94.7 65 75.4
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.7e-18 94.7 64 75.0
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 3.5e-18 94.4 64 78.1
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.5e-18 94.4 64 70.3
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 3.5e-18 94.4 65 76.9
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 3.5e-18 94.4 64 71.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 7.9e-18 93.2 65 70.8
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 7.9e-18 93.2 65 73.8
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.3e-17 92.4 64 73.4
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.3e-17 92.4 64 73.4
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.8e-17 92.0 62 72.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.8e-17 92.0 64 71.9
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.8e-17 92.0 65 70.8
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 2.3e-17 91.7 64 73.4
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.3e-17 91.7 64 71.9
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 3.0e-17 91.3 64 75.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 5.1e-17 90.5 64 68.8
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-16 89.4 64 71.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.5e-16 89.0 64 70.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.9e-16 88.6 64 71.9
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.5e-16 88.2 64 71.9
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.3e-16 87.8 54 79.6
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 5.7e-16 87.0 64 70.3
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 7.4e-16 86.7 64 67.2
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.5e-13 79.0 64 65.6
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.6e-13 78.2 64 59.4
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 6.5e-12 73.6 64 60.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.9e-11 72.0 65 64.6
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.3e-09 65.1 63 58.7
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.8e-07 57.4 63 52.4
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 2.4e-06 55.1 62 43.5
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 5.3e-06 53.9 57 54.4


User provided reference genes

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