Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001147 Daucus carota HOM05D000123 ORTHO05D000064 5.5e-23 110.2 57 100.0
Dinv21258 Davidia involucrata HOM05D000123 ORTHO05D000064 3.3e-12 74.3 52 73.1
DCAR_020778 Daucus carota HOM05D000123 ORTHO05D000064 1.7e-11 72.0 48 77.1
Rhsim03G0081300 Rhododendron simsii HOM05D000123 ORTHO05D000064 3.7e-11 70.9 53 69.8
vmacro07361 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 4.8e-11 70.5 49 73.5
QL07p040557 Quercus lobata HOM05D000123 ORTHO05D000064 8.2e-11 69.7 52 63.5
Actinidia11334 Actinidia chinensis HOM05D000123 ORTHO05D000064 1.1e-10 69.3 52 67.3
Solyc09g009100.4 Solanum lycopersicum HOM05D000123 ORTHO05D000064 2.4e-10 68.2 52 67.3
PGSC0003DMG401002683 Solanum tuberosum HOM05D000123 ORTHO05D000064 2.4e-10 68.2 52 67.3
CSS0012317 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 3.1e-10 67.8 49 71.4
CAN.G824.29 Capsicum annuum HOM05D000123 ORTHO05D000064 5.3e-10 67.0 53 66.0
Lj2E129T4 Lonicera japonica HOM05D000123 ORTHO05D000064 6.9e-10 66.6 50 72.0
Peaxi162Scf00433g00411 Petunia axillaris HOM05D000123 ORTHO05D000064 6.9e-10 66.6 52 67.3
CiPaw.10G005300 Carya illinoinensis HOM05D000123 ORTHO05D000064 9.1e-10 66.2 50 66.0
Sopen09g003810 Solanum pennellii HOM05D000123 ORTHO05D000064 9.1e-10 66.2 52 65.4
Duzib093G0099 Durio zibethinus HOM05D000123 ORTHO05D000064 1.2e-09 65.9 52 63.5
Nitab4.5_0006360g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.5e-09 65.5 50 70.0
COL.COLO4_29816 Corchorus olitorius HOM05D000123 ORTHO05D000064 2.0e-09 65.1 52 61.5
SalBow5G3509 Salvia bowleyana HOM05D000123 ORTHO05D000064 3.4e-09 64.3 54 61.1
Nitab4.5_0000663g0110 Nicotiana tabacum HOM05D000123 ORTHO05D000064 4.5e-09 63.9 50 70.0
Sabra06G0090500 Salix brachista HOM05D000123 ORTHO05D000064 5.9e-09 63.5 52 61.5
Ciclev10011531m.g Citrus clementina HOM05D000123 ORTHO05D000064 7.7e-09 63.2 51 58.8
MD12G1017900 Malus domestica HOM05D000123 ORTHO05D000064 7.7e-09 63.2 52 55.8
Cc06_g05260 Coffea canephora HOM05D000123 ORTHO05D000064 1.0e-08 62.8 52 63.5
THA.LOC104816373 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 1.0e-08 62.8 51 58.8
TWI53G0606 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 1.0e-08 62.8 49 63.3
Actinidia39884 Actinidia chinensis HOM05D000123 ORTHO05D000064 1.7e-08 62.0 52 61.5
TWI74G1412 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 1.7e-08 62.0 52 61.5
GSVIVG01033781001 Vitis vinifera HOM05D000123 ORTHO05D000064 1.7e-08 62.0 49 63.3
MD14G1015900 Malus domestica HOM05D000123 ORTHO05D000064 2.2e-08 61.6 49 59.2
PGR004G2837 Punica granatum HOM05D000123 ORTHO05D000064 2.2e-08 61.6 49 63.3
Atru.chr8.1635 Acer truncatum HOM05D000123 ORTHO05D000064 3.8e-08 60.8 49 55.1
Prupe.7G117200 Prunus persica HOM05D000123 ORTHO05D000064 3.8e-08 60.8 52 59.6
TWI77G0809 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 3.8e-08 60.8 52 59.6
Haze_19537 Corylus avellana HOM05D000123 ORTHO05D000064 5.0e-08 60.5 52 57.7
Gohir.A09G135700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 6.5e-08 60.1 52 55.8
Gohir.D09G137600 Gossypium hirsutum HOM05D000123 ORTHO05D000064 6.5e-08 60.1 52 55.8
Gorai.006G158000 Gossypium raimondii HOM05D000123 ORTHO05D000064 6.5e-08 60.1 52 55.8
Cfa016372 Carpinus fangiana HOM05D000123 ORTHO05D000064 8.5e-08 59.7 49 61.2
Manes.08G020700 Manihot esculenta HOM05D000123 ORTHO05D000064 8.5e-08 59.7 49 55.1
Aa31LG1G21520 Aethionema arabicum HOM05D000123 ORTHO05D000064 1.1e-07 59.3 47 59.6
CsaV3_3G036820 Cucumis sativus L. HOM05D000123 ORTHO05D000064 1.1e-07 59.3 49 57.1
ECA248G2453 Erigeron canadensis HOM05D000123 ORTHO05D000064 1.1e-07 59.3 52 59.6
Sed0012112 Sechium edule HOM05D000123 ORTHO05D000064 1.1e-07 59.3 52 53.8
Nn2g14000 Nelumbo nucifera HOM05D000123 ORTHO05D000064 1.4e-07 58.9 50 58.0
MELO3C027079.2 Cucumis melo HOM05D000123 ORTHO05D000064 1.9e-07 58.5 49 57.1
Manes.09G059028 Manihot esculenta HOM05D000123 ORTHO05D000064 2.5e-07 58.2 51 56.9
Potri.006G115700 Populus trichocarpa HOM05D000123 ORTHO05D000064 2.5e-07 58.2 50 60.0
RcHm_v2.0_Chr3g0472141 Rosa chinensis HOM05D000123 ORTHO05D000064 2.5e-07 58.2 52 53.8
Migut.L01754 Erythranthe guttata HOM05D000123 ORTHO05D000064 4.2e-07 57.4 50 60.0
AUR62033579 Chenopodium quinoa HOM05D000123 ORTHO05D000064 5.5e-07 57.0 49 55.1
AUR62041419 Chenopodium quinoa HOM05D000123 ORTHO05D000064 5.5e-07 57.0 49 55.1
Sed0011925 Sechium edule HOM05D000123 ORTHO05D000064 5.5e-07 57.0 48 58.3
ATR0820G264 Amborella trichopoda HOM05D000123 ORTHO05D000064 7.2e-07 56.6 51 54.9
Thecc.05G080900 Theobroma cacao HOM05D000123 ORTHO05D000064 1.2e-06 55.8 52 53.8
C09p73200 Brassica napus HOM05D000123 ORTHO05D000064 1.6e-06 55.5 47 55.3
BolC9t60055H Brassica oleracea HOM05D000123 ORTHO05D000064 1.6e-06 55.5 47 55.3
Thhalv10013758m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 1.6e-06 55.5 47 53.2
Lj5g0020966 Lotus japonicus HOM05D000123 ORTHO05D000064 1.6e-06 55.5 52 53.8
SGA_v2.0_scaffold184G39923 Striga asiatica HOM05D000123 ORTHO05D000064 1.6e-06 55.5 52 53.8
Carub.0006s0264 Capsella rubella HOM05D000123 ORTHO05D000064 2.1e-06 55.1 50 52.0
Lsat_1_v5_gn_6_27101 Lactuca sativa HOM05D000123 ORTHO05D000064 2.1e-06 55.1 50 60.0
FvH4_6g17890 Fragaria vesca HOM05D000123 ORTHO05D000064 2.7e-06 54.7 49 55.1
FAN05G4576 Fragaria x ananassa HOM05D000123 ORTHO05D000064 2.7e-06 54.7 49 55.1
FAN05G5362 Fragaria x ananassa HOM05D000123 ORTHO05D000064 2.7e-06 54.7 49 55.1
FAN09G3311 Fragaria x ananassa HOM05D000123 ORTHO05D000064 2.7e-06 54.7 49 55.1
MBI17_g01041_MAGBIO Magnolia biondii HOM05D000123 ORTHO05D000064 2.7e-06 54.7 51 52.9
Sp6g39000 Schrenkiella parvula HOM05D000123 ORTHO05D000064 2.7e-06 54.7 47 55.3
TAR633G0777 Trochodendron aralioides HOM05D000123 ORTHO05D000064 2.7e-06 54.7 51 51.0
BcaC06g32079 Brassica carinata HOM05D000123 ORTHO05D000064 3.6e-06 54.3 47 53.2
A10p32380 Brassica napus HOM05D000123 ORTHO05D000064 3.6e-06 54.3 47 53.2
BraA10t45278Z Brassica rapa HOM05D000123 ORTHO05D000064 3.6e-06 54.3 47 53.2
Oeu033119.2 Olea europaea HOM05D000123 ORTHO05D000064 3.6e-06 54.3 47 57.4
Ah.15g091110 Amaranthus hybridus HOM05D000123 ORTHO05D000064 4.7e-06 53.9 47 59.6
ECA233G0278 Erigeron canadensis HOM05D000123 ORTHO05D000064 4.7e-06 53.9 47 63.8
Oeu039829.1 Olea europaea HOM05D000123 ORTHO05D000064 4.7e-06 53.9 50 56.0
HanXRQChr13g0400011 Helianthus annuus HOM05D000123 ORTHO05D000064 6.1e-06 53.5 42 69.0
arahy.Tifrunner.gnm1.ann1.7QKH3M Arachis hypogaea HOM05D000123 ORTHO05D000064 7.9e-06 53.1 52 50.0
arahy.Tifrunner.gnm1.ann1.YFKM11 Arachis hypogaea HOM05D000123 ORTHO05D000064 7.9e-06 53.1 52 50.0
Medtr1g061170 Medicago truncatula HOM05D000123 ORTHO05D000064 7.9e-06 53.1 49 57.1
Hund04071 Selenicereus undatus HOM05D000123 ORTHO05D000064 7.9e-06 53.1 53 50.9


User provided reference genes

Program Settings