Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001100 Daucus carota HOM05D005297 ORTHO05D006545 1.3e-73 279.6 142 100.0
QL02p014091 Quercus lobata HOM05D005297 ORTHO05D006545 4.7e-39 164.9 125 68.0
Rhsim13G0108000 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.4e-38 163.3 126 68.3
GSVIVG01036187001 Vitis vinifera HOM05D005297 ORTHO05D006545 6.7e-38 161.0 126 65.9
Manes.11G159700 Manihot esculenta HOM05D005297 ORTHO05D006545 2.0e-37 159.5 130 63.8
Thecc.09G287800 Theobroma cacao HOM05D005297 ORTHO05D006545 2.0e-37 159.5 126 66.7
AUR62039239 Chenopodium quinoa HOM05D005297 ORTHO05D006545 7.4e-37 157.5 127 61.4
Duzib150G0109 Durio zibethinus HOM05D005297 ORTHO05D006545 9.7e-37 157.1 126 65.1
Nitab4.5_0003532g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 9.7e-37 157.1 127 65.4
Nitab4.5_0021448g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 9.7e-37 157.1 127 65.4
Aqoxy4G02831 Aquilegia oxysepala HOM05D005297 ORTHO05D006545 1.3e-36 156.8 129 62.0
ECA236G0310 Erigeron canadensis HOM05D005297 ORTHO05D006545 3.7e-36 155.2 130 62.3
PGSC0003DMG400007409 Solanum tuberosum HOM05D005297 ORTHO05D006545 3.7e-36 155.2 127 65.4
CSS0010276 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 4.8e-36 154.8 130 65.4
Actinidia24196 Actinidia chinensis HOM05D005392 ORTHO05D006709 6.3e-36 154.5 126 63.5
Gohir.D07G112500 Gossypium hirsutum HOM05D005297 ORTHO05D006545 6.3e-36 154.5 126 65.9
Gorai.001G120900 Gossypium raimondii HOM05D005297 ORTHO05D006545 6.3e-36 154.5 126 65.9
Gohir.A07G108700 Gossypium hirsutum HOM05D005297 ORTHO05D006545 8.2e-36 154.1 126 65.9
Gohir.A07G108780 Gossypium hirsutum HOM05D005297 ORTHO05D006545 8.2e-36 154.1 126 65.9
Manes.14G159600 Manihot esculenta HOM05D005297 ORTHO05D006545 8.2e-36 154.1 130 62.3
Atru.chr3.3335 Acer truncatum HOM05D005297 ORTHO05D006545 1.1e-35 153.7 126 62.7
CAN.G644.6 Capsicum annuum HOM05D005297 ORTHO05D006545 1.1e-35 153.7 126 62.7
Peaxi162Scf00544g00918 Petunia axillaris HOM05D005297 ORTHO05D006545 1.1e-35 153.7 127 63.8
Eucgr.J00466 Eucalyptus grandis HOM05D005297 ORTHO05D006545 1.4e-35 153.3 126 63.5
Nn2g14072 Nelumbo nucifera HOM05D005297 ORTHO05D006545 1.8e-35 152.9 126 62.7
Hund18738 Selenicereus undatus HOM05D005297 ORTHO05D006545 3.1e-35 152.1 128 60.9
unitig_736.g22397 Utricularia gibba HOM05D005297 ORTHO05D006545 3.1e-35 152.1 127 63.8
Cc01_g09520 Coffea canephora HOM05D005297 ORTHO05D006545 4.1e-35 151.8 127 63.0
MSTRG.18743 Avicennia marina HOM05D005297 ORTHO05D006545 7.0e-35 151.0 127 63.0
AUR62009792 Chenopodium quinoa HOM05D005297 ORTHO05D006545 7.0e-35 151.0 122 61.5
Solyc11g067150.2 Solanum lycopersicum HOM05D005297 ORTHO05D006545 9.1e-35 150.6 126 63.5
Sopen11g026830 Solanum pennellii HOM05D005297 ORTHO05D006545 9.1e-35 150.6 126 63.5
CAN.G1177.8 Capsicum annuum HOM05D005297 ORTHO05D006545 1.2e-34 150.2 127 62.2
CiPaw.13G138500 Carya illinoinensis HOM05D005297 ORTHO05D006545 2.0e-34 149.4 149 57.0
HanXRQChr13g0408991 Helianthus annuus HOM05D005297 ORTHO05D006545 2.6e-34 149.1 130 59.2
PSO782G3247 Papaver somniferum HOM05D005297 ORTHO05D006545 2.6e-34 149.1 123 64.2
MELO3C003122.2 Cucumis melo HOM05D005297 ORTHO05D006545 3.5e-34 148.7 125 63.2
Haze_23424 Corylus avellana HOM05D005297 ORTHO05D006545 7.7e-34 147.5 117 66.7
SalBow6G5239 Salvia bowleyana HOM05D005297 ORTHO05D006545 7.7e-34 147.5 128 63.3
MBI17_g16878_MAGBIO Magnolia biondii HOM05D005297 ORTHO05D006545 1.0e-33 147.1 126 61.1
Ciclev10029400m.g Citrus clementina HOM05D005297 ORTHO05D006545 1.3e-33 146.7 127 63.0
CsaV3_4G024870 Cucumis sativus L. HOM05D005297 ORTHO05D006545 1.3e-33 146.7 125 63.2
Sabra09G0113000 Salix brachista HOM05D005297 ORTHO05D006545 1.3e-33 146.7 130 60.0
Sabra09G0115400 Salix brachista HOM05D005297 ORTHO05D006545 1.3e-33 146.7 130 60.0
Lsat_1_v5_gn_8_90380 Lactuca sativa HOM05D005297 ORTHO05D006545 1.7e-33 146.4 131 58.8
BcaC04g21280 Brassica carinata HOM05D005297 ORTHO05D006545 2.2e-33 146.0 129 59.7
PSO425G0036 Papaver somniferum HOM05D005297 ORTHO05D006545 2.2e-33 146.0 125 64.0
Potri.009G146100 Populus trichocarpa HOM05D005297 ORTHO05D006545 2.2e-33 146.0 130 61.5
vmacro03296 Vaccinium macrocarpon HOM05D005297 ORTHO05D006545 2.2e-33 146.0 133 60.2
CANSAT64G2769 Cannabis sativa HOM05D005297 ORTHO05D006545 2.9e-33 145.6 127 60.6
Lsat_1_v5_gn_8_117180 Lactuca sativa HOM05D005297 ORTHO05D006545 2.9e-33 145.6 132 58.3
PSO384G0067 Papaver somniferum HOM05D005297 ORTHO05D006545 3.8e-33 145.2 125 62.4
Dinv29444 Davidia involucrata HOM05D005297 ORTHO05D006545 6.5e-33 144.4 114 66.7
Hma1.2p1_0305F.1_g119460 Hydrangea macrophylla HOM05D005297 ORTHO05D006545 6.5e-33 144.4 114 67.5
PSO170G0247 Papaver somniferum HOM05D005297 ORTHO05D006545 1.1e-32 143.7 122 62.3
THA.LOC104799541 Tarenaya hassleriana HOM05D005297 ORTHO05D006545 1.1e-32 143.7 129 58.9
RcHm_v2.0_Chr5g0054901 Rosa chinensis HOM05D005297 ORTHO05D006545 1.5e-32 143.3 111 66.7
PSO339G0592 Papaver somniferum HOM05D005297 ORTHO05D006545 1.9e-32 142.9 125 62.4
PGR119G1280 Punica granatum HOM05D005297 ORTHO05D006545 1.9e-32 142.9 128 60.2
TAR623G0730 Trochodendron aralioides HOM05D005297 ORTHO05D006545 1.9e-32 142.9 127 59.8
Carub.0006s3210 Capsella rubella HOM05D005297 ORTHO05D006545 2.5e-32 142.5 129 58.9
RcHm_v2.0_Chr5g0054661 Rosa chinensis HOM05D005297 ORTHO05D006545 2.5e-32 142.5 111 65.8
EL10Ac7g15793 Beta vulgaris HOM05D005297 ORTHO05D006545 3.2e-32 142.1 122 59.8
CARHR253330 Cardamine hirsuta HOM05D005297 ORTHO05D006545 3.2e-32 142.1 134 57.5
Migut.N00940 Erythranthe guttata HOM05D005297 ORTHO05D006545 3.2e-32 142.1 127 59.1
AL6G47810 Arabidopsis lyrata HOM05D005297 ORTHO05D006545 4.2e-32 141.7 139 55.4
C09p33610 Brassica napus HOM05D002056 ORTHO05D002289 4.2e-32 141.7 125 60.0
BolC9t56195H Brassica oleracea HOM05D002056 ORTHO05D002289 4.2e-32 141.7 125 60.0
Aa31LG6G1540 Aethionema arabicum HOM05D005297 ORTHO05D006545 5.5e-32 141.4 129 58.1
MD11G1160800 Malus domestica HOM05D005297 ORTHO05D006545 5.5e-32 141.4 111 64.9
A09p26430 Brassica napus HOM05D005297 ORTHO05D006545 7.2e-32 141.0 125 59.2
BraA09t38217Z Brassica rapa HOM05D005297 ORTHO05D006545 7.2e-32 141.0 125 59.2
Cpa.g.sc32.130 Carica papaya HOM05D005297 ORTHO05D006545 7.2e-32 141.0 126 60.3
Prupe.6G124400 Prunus persica HOM05D005297 ORTHO05D006545 7.2e-32 141.0 111 64.9
Sc21g0007210 Simmondsia chinensis HOM05D005297 ORTHO05D006545 7.2e-32 141.0 116 63.8
TWI79G0927 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 1.2e-31 140.2 126 57.1
Lalb_Chr24g0395231 Lupinus albus HOM05D005297 ORTHO05D006545 1.6e-31 139.8 108 64.8
Os04g0410300 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 1.6e-31 139.8 130 56.9
Sc15g0007560 Simmondsia chinensis HOM05D005297 ORTHO05D006545 1.6e-31 139.8 121 59.5
AT4G04190 Arabidopsis thaliana HOM05D005297 ORTHO05D006545 2.1e-31 139.4 135 54.8
Thhalv10029010m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 2.1e-31 139.4 130 57.7
TWI79G0105 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 2.1e-31 139.4 126 57.1
Zm00001eb084080 Zea mays HOM05D005297 ORTHO05D006545 2.1e-31 139.4 130 55.4
ATR0820G241 Amborella trichopoda HOM05D005297 ORTHO05D006545 3.6e-31 138.7 124 57.3
BcaB01g01797 Brassica carinata HOM05D005297 ORTHO05D006545 3.6e-31 138.7 129 58.1
SGA_v2.0_scaffold147G36360 Striga asiatica HOM05D005297 ORTHO05D006545 3.6e-31 138.7 130 56.9
HPP92_006421 Vanilla planifolia HOM05D005297 ORTHO05D006545 4.7e-31 138.3 129 54.3
Sp6g04610 Schrenkiella parvula HOM05D005297 ORTHO05D006545 1.0e-30 137.1 129 55.8
SEGI_17822 Sequoiadendron giganteum HOM05D005297 ORTHO05D006545 1.0e-30 137.1 131 56.5
PSO801G0702 Papaver somniferum HOM05D005297 ORTHO05D006545 1.4e-30 136.7 122 60.7
arahy.Tifrunner.gnm1.ann1.Q11QUE Arachis hypogaea HOM05D005297 ORTHO05D006545 2.3e-30 136.0 108 63.0
FAN21G1663 Fragaria x ananassa HOM05D005297 ORTHO05D006545 2.3e-30 136.0 109 63.3
FAN16G3468 Fragaria x ananassa HOM05D005297 ORTHO05D006545 4.0e-30 135.2 111 62.2
Glyma.12G183000 Glycine max HOM05D005297 ORTHO05D006545 5.2e-30 134.8 110 63.6
TPR.G2691 Trifolium pratense HOM05D005297 ORTHO05D006545 5.2e-30 134.8 107 64.5
Lj2g0006626 Lotus japonicus HOM05D005297 ORTHO05D006545 6.7e-30 134.4 108 64.8
Sp7g17550 Schrenkiella parvula HOM05D005297 ORTHO05D006545 8.8e-30 134.0 130 57.7
Medtr0227s0030 Medicago truncatula HOM05D005297 ORTHO05D006545 1.2e-29 133.7 109 62.4
PSO782G5408 Papaver somniferum HOM05D005297 ORTHO05D006545 1.2e-29 133.7 122 59.8
Medtr4g088775 Medicago truncatula HOM05D005297 ORTHO05D006545 1.5e-29 133.3 109 62.4
Glyma.13G318100 Glycine max HOM05D005297 ORTHO05D006545 2.0e-29 132.9 109 64.2
arahy.Tifrunner.gnm1.ann1.CT6H1M Arachis hypogaea HOM05D005297 ORTHO05D006545 5.7e-29 131.3 109 60.6
FvH4_3g29610 Fragaria vesca HOM05D005297 ORTHO05D006545 5.7e-29 131.3 109 61.5
FAN11G1678 Fragaria x ananassa HOM05D005297 ORTHO05D006545 5.7e-29 131.3 109 61.5
Phvul.005G125900 Phaseolus vulgaris HOM05D005297 ORTHO05D006545 7.5e-29 131.0 111 61.3
Rhsim13G0108200 Rhododendron simsii HOM05D005297 ORTHO05D006545 8.2e-28 127.5 95 68.4
Psat2g130440 Pisum sativum HOM05D005297 ORTHO05D006545 1.4e-27 126.7 109 61.5
PSO339G2689 Papaver somniferum HOM05D005297 ORTHO05D006545 1.8e-27 126.3 108 61.1
MD03G1139300 Malus domestica HOM05D005297 ORTHO05D006545 2.4e-27 125.9 130 55.4
CSS0048581 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 7.0e-27 124.4 95 67.4
COL.COLO4_19936 Corchorus olitorius HOM05D005297 ORTHO05D006545 9.1e-27 124.0 95 67.4
Rhsim05G0032500 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.6e-26 123.2 93 66.7
VMungo1080G0855 Vigna mungo HOM05D005392 ORTHO05D006709 1.0e-25 120.6 95 65.3
Sed0022012 Sechium edule HOM05D005297 ORTHO05D006545 1.3e-25 120.2 95 65.3
Nitab4.5_0024933g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 1.7e-25 119.8 95 64.2
Thhalv10005498m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 2.9e-25 119.0 117 56.4
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 1.1e-24 117.1 96 61.5
Rhsim13G0107700 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.5e-24 116.7 99 64.6
Os01g0191000 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 3.2e-24 115.5 111 51.4
Ca_05140_v3 Cicer arietinum L. HOM05D005297 ORTHO05D012218 7.2e-24 114.4 92 63.0
Ca_09074_v3 Cicer arietinum L. HOM05D005297 ORTHO05D006545 1.6e-23 113.2 93 62.4
Pp3c27_2700 Physcomitrium patens HOM05D005297 ORTHO05D006545 1.6e-23 113.2 125 44.8
Mapoly0068s0054 Marchantia polymorpha HOM05D005297 ORTHO05D006545 2.1e-23 112.8 125 48.0
TAR369G0691 Trochodendron aralioides HOM05D005297 ORTHO05D006545 4.7e-23 111.7 98 60.2
Medtr4g073910 Medicago truncatula HOM05D005297 ORTHO05D006545 6.1e-23 111.3 87 63.2
QL02p014117 Quercus lobata HOM05D005297 ORTHO05D006545 1.0e-22 110.5 68 79.4
CSS0004713 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 1.3e-20 103.6 84 63.1
Lj2A987T34 Lonicera japonica HOM05D005297 ORTHO05D006545 4.8e-20 101.7 67 73.1
CBR_g82609 Chara braunii HOM05D005297 ORTHO05D006545 5.4e-19 98.2 110 45.5
arahy.Tifrunner.gnm1.ann1.S3X3J8 Arachis hypogaea HOM05D005297 ORTHO05D006545 9.1e-19 97.4 72 65.3
Duzib168G0206 Durio zibethinus HOM05D005297 ORTHO05D006545 1.2e-18 97.1 67 71.6
CDE11G0319 Ceratophyllum demersum HOM05D005297 ORTHO05D006545 2.7e-18 95.9 67 65.7
C02p40370 Brassica napus HOM05D000848 ORTHO05D000007 5.9e-18 94.7 68 64.7
SHI11151 Sapria himalayana HOM05D005297 ORTHO05D000023 1.7e-17 93.2 60 70.0
BolC2t10071H Brassica oleracea HOM05D005297 ORTHO05D000007 3.6e-15 85.5 69 62.3
Oeu046141.1 Olea europaea HOM05D005297 ORTHO05D006545 1.8e-14 83.2 82 57.3
Psat2g121320 Pisum sativum HOM05D005297 ORTHO05D006545 9.8e-13 77.4 55 60.0
CSS0043339 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 1.7e-09 66.6 79 50.6
RcHm_v2.0_Chr5g0054771 Rosa chinensis HOM05D005297 ORTHO05D006545 8.0e-07 57.8 43 65.1
arahy.Tifrunner.gnm1.ann1.LDL4WN Arachis hypogaea HOM05D005297 ORTHO05D006545 4.0e-06 55.5 28 78.6


User provided reference genes

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