Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 7.8e-211 736.9 372 100.0
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.5e-145 520.0 408 65.7
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.9e-141 505.8 408 65.4
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 7.2e-140 501.1 408 65.0
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 2.3e-138 496.1 405 64.7
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 5.2e-138 495.0 407 64.1
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 1.5e-137 493.4 406 63.5
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 9.7e-137 490.7 408 64.2
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 1.7e-136 490.0 406 64.3
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.7e-136 490.0 408 64.7
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.8e-136 489.2 407 63.4
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 2.8e-136 489.2 408 63.7
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 4.8e-136 488.4 408 64.5
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.8e-136 488.4 406 64.0
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.3e-136 488.0 406 64.0
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.2e-136 487.6 406 64.0
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.8e-135 486.5 408 63.5
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 5.3e-135 485.0 406 62.3
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 9.1e-135 484.2 406 64.5
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.6e-134 483.4 406 62.8
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.6e-134 483.4 408 63.0
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 2.0e-134 483.0 406 61.8
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 4.5e-134 481.9 404 63.1
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 4.5e-134 481.9 406 62.8
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.0e-133 480.7 406 63.8
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.7e-133 479.9 408 61.5
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 8.5e-133 477.6 401 61.1
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 1.1e-132 477.2 408 61.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.5e-132 476.9 406 62.6
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.9e-132 476.5 408 63.2
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 3.2e-132 475.7 408 63.5
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 3.2e-132 475.7 406 61.8
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 4.2e-132 475.3 401 61.6
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.7e-131 472.6 408 61.5
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.7e-131 472.6 409 60.4
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 3.6e-131 472.2 404 61.1
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 4.7e-131 471.9 411 61.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 4.7e-131 471.9 404 62.4
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 8.0e-131 471.1 404 62.9
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 1.4e-130 470.3 406 59.1
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 3.0e-130 469.2 404 61.9
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.0e-130 468.8 406 60.8
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.5e-129 466.8 410 61.2
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 7.5e-129 464.5 410 60.7
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.2e-128 463.0 410 60.7
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 2.8e-128 462.6 409 60.4
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 2.8e-128 462.6 409 60.4
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 2.8e-128 462.6 407 60.4
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.7e-128 462.2 407 60.0
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 6.3e-128 461.5 406 60.1
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.1e-127 460.7 409 60.1
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.4e-127 460.3 406 60.1
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.4e-127 459.5 410 60.0
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.2e-126 457.2 406 61.1
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.6e-126 456.8 409 59.9
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.7e-126 456.1 406 59.1
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.7e-126 456.1 403 58.6
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 3.5e-126 455.7 410 59.5
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 3.8e-125 452.2 406 60.6
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 3.8e-125 452.2 376 63.3
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 5.0e-125 451.8 400 59.0
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.9e-124 449.9 405 60.5
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 3.2e-124 449.1 409 59.7
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 9.4e-124 447.6 394 60.9
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 9.4e-124 447.6 408 58.3
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-122 443.4 380 62.9
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.8e-122 443.4 402 58.7
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 4.0e-122 442.2 408 58.1
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.6e-121 439.5 402 57.2
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 9.8e-121 437.6 414 59.2
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.7e-120 436.8 407 57.2
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 3.7e-120 435.6 408 56.6
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 3.7e-120 435.6 401 58.1
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.7e-120 435.6 375 62.7
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 6.3e-120 434.9 408 56.6
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.1e-119 434.1 408 56.6
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 5.4e-119 431.8 406 56.9
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 9.1e-119 431.0 345 65.8
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 2.0e-118 429.9 386 60.6
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 2.7e-118 429.5 405 56.8
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 6.5e-117 424.9 410 56.8
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 5.5e-116 421.8 408 58.6
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.2e-115 420.6 449 53.5
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.1e-115 419.9 381 59.8
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.0e-114 417.5 371 62.5
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 8.8e-114 414.5 410 55.6
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 5.7e-113 411.8 412 53.4
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.2e-110 404.1 349 61.3
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 5.7e-105 385.2 371 58.5
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 9.8e-105 384.4 373 56.3
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 5.4e-103 378.6 401 51.1
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.2e-102 377.5 344 59.3
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 3.0e-101 372.9 337 59.1
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.8e-98 363.6 401 49.1
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 3.1e-98 362.8 407 48.2
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.2e-97 360.9 407 47.7
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.8e-90 337.0 323 57.9
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 7.1e-87 325.1 434 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.1e-83 313.5 365 47.4
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 8.9e-82 308.1 247 68.0
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 1.7e-80 303.9 248 65.7
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 4.9e-80 302.4 414 41.8
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 7.8e-78 295.0 252 59.1
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.3e-77 293.5 353 44.2
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.3e-77 293.5 353 44.2
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 1.2e-75 287.7 260 60.8
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.2e-75 287.7 293 49.8
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 1.4e-74 284.3 411 40.1
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 4.4e-73 279.3 228 64.5
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.1e-67 260.4 400 40.5
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 3.4e-57 226.5 331 41.7
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 8.7e-53 211.8 372 41.4
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 6.9e-50 202.2 131 72.5
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 4.6e-46 189.5 232 46.6
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 4.3e-44 183.0 376 33.8
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 1.5e-36 157.9 192 46.9
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 4.3e-36 156.4 248 37.9
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.5e-33 147.9 103 69.9
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.0e-32 145.2 90 73.3
BcaB04g19325 Brassica carinata HOM05D000329 ORTHO05D005330 3.2e-31 140.2 178 46.1
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 6.9e-26 122.5 85 68.2
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 6.5e-24 115.9 82 67.1
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.7e-22 110.5 79 63.3
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 1.5e-15 88.2 90 57.8
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 3.3e-12 77.0 56 66.1
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 4.4e-12 76.6 393 23.2
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 5.7e-12 76.3 63 58.7
Lsat_1_v5_gn_2_33241 Lactuca sativa HOM05D000329 ORTHO05D005330 1.3e-11 75.1 101 43.6
Lsat_1_v5_gn_0_32021 Lactuca sativa HOM05D000147 ORTHO05D013131 4.8e-11 73.2 91 48.4
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.1e-07 62.0 218 24.8
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 8.0e-06 55.8 232 25.0


User provided reference genes

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