Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 3.9e-125 451.4 223 100.0
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 4.5e-81 305.1 171 82.5
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 8.5e-80 300.8 175 81.1
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 1.9e-79 299.7 203 73.4
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 1.6e-78 296.6 187 78.1
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 1.4e-77 293.5 246 63.0
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 3.0e-77 292.4 183 77.6
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 4.0e-77 292.0 183 77.6
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 5.2e-77 291.6 181 77.9
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 2.0e-76 289.7 166 81.3
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 4.4e-76 288.5 177 79.1
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 4.4e-76 288.5 179 76.5
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 9.8e-76 287.3 238 63.0
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 1.7e-75 286.6 177 76.8
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 2.8e-75 285.8 179 75.4
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 2.8e-75 285.8 177 75.7
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 1.4e-74 283.5 172 77.3
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 1.4e-74 283.5 264 56.1
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 1.4e-74 283.5 267 55.1
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 2.4e-74 282.7 261 57.5
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 9.2e-74 280.8 177 75.1
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 1.2e-73 280.4 179 74.3
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 1.2e-73 280.4 174 77.6
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 2.0e-73 279.6 187 73.8
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 2.7e-73 279.3 174 78.7
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 5.9e-73 278.1 171 74.9
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 5.9e-73 278.1 169 76.3
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 1.0e-72 277.3 177 74.6
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 1.3e-72 276.9 179 73.7
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 1.7e-72 276.6 169 75.1
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 1.7e-72 276.6 179 74.9
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 3.8e-72 275.4 179 74.3
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 6.6e-72 274.6 179 74.9
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 8.6e-72 274.2 179 72.6
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 1.1e-71 273.9 175 72.6
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 1.1e-71 273.9 179 73.7
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 2.5e-71 272.7 168 75.6
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 4.3e-71 271.9 280 54.3
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 4.3e-71 271.9 169 75.7
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 7.3e-71 271.2 176 75.0
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 9.5e-71 270.8 179 73.2
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 1.6e-70 270.0 184 71.7
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 2.1e-70 269.6 258 55.4
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 2.8e-70 269.2 173 71.1
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 3.6e-70 268.9 166 74.7
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 4.7e-70 268.5 173 72.3
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 8.0e-70 267.7 247 55.9
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 8.0e-70 267.7 244 55.7
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 1.0e-69 267.3 281 50.5
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 1.0e-69 267.3 201 67.2
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 1.8e-69 266.5 179 69.3
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 5.2e-69 265.0 281 49.8
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 6.8e-69 264.6 233 57.1
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 1.5e-68 263.5 281 49.8
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 2.0e-68 263.1 182 69.2
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 3.4e-68 262.3 167 71.3
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 3.4e-68 262.3 278 50.7
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 5.7e-68 261.5 281 49.5
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 5.7e-68 261.5 281 49.5
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 5.7e-68 261.5 174 71.3
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 9.8e-68 260.8 242 58.7
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 1.3e-67 260.4 169 71.0
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 1.3e-67 260.4 169 71.0
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 4.9e-67 258.5 166 72.9
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 1.1e-66 257.3 272 51.8
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 1.1e-66 257.3 281 48.8
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 2.4e-66 256.1 177 70.1
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 3.2e-66 255.8 173 68.2
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 7.0e-66 254.6 167 71.3
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 7.0e-66 254.6 167 70.1
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 9.2e-66 254.2 175 68.6
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 2.0e-65 253.1 173 67.6
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 4.6e-65 251.9 173 67.1
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 1.7e-64 250.0 173 65.9
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 3.9e-64 248.8 176 68.2
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 6.6e-64 248.1 194 62.4
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 1.9e-63 246.5 182 65.4
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 2.5e-63 246.1 176 67.0
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 4.3e-63 245.4 179 63.1
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 4.3e-63 245.4 179 63.1
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.2e-62 243.8 167 68.3
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 4.7e-62 241.9 167 67.7
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 6.8e-61 238.0 173 64.7
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 1.2e-60 237.3 170 63.5
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 9.8e-60 234.2 168 66.7
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 6.0e-57 224.9 173 60.7
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 1.7e-56 223.4 179 59.8
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 3.3e-55 219.2 209 55.5
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 3.6e-54 215.7 154 66.2
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 1.4e-53 213.8 209 54.1
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 2.0e-52 209.9 136 71.3
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 2.0e-52 209.9 187 55.1
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 6.4e-51 204.9 123 76.4
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 3.0e-48 196.1 173 55.5
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 9.2e-42 174.5 233 45.5
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 2.1e-41 173.3 98 83.7
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 3.5e-41 172.6 212 46.2
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 2.3e-40 169.9 159 56.6
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.7e-38 162.2 153 56.2
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 6.0e-33 145.2 98 67.3
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 7.8e-33 144.8 98 67.3
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 3.9e-32 142.5 100 70.0
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 2.1e-30 136.7 171 42.1
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 1.1e-29 134.4 158 46.2
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 5.3e-29 132.1 99 60.6
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 6.9e-29 131.7 76 80.3
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 8.4e-27 124.8 142 47.9
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.8e-22 109.8 78 64.1
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 6.2e-22 108.6 73 65.8
BraA06t24956Z Brassica rapa HOM05D006526 ORTHO05D024464 1.5e-15 87.4 114 46.5
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 1.9e-15 87.0 57 70.2
EL10Ac8g19274 Beta vulgaris HOM05D006526 ORTHO05D008496 3.3e-15 86.3 68 64.7
C08p24000 Brassica napus HOM05D006526 ORTHO05D024464 1.4e-13 80.9 75 56.0
CSS0022358 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.2e-12 77.8 73 54.8
CSS0047032 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 3.4e-12 76.3 73 53.4
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 7.6e-12 75.1 55 69.1
BcaC07g39377 Brassica carinata HOM05D006526 ORTHO05D024464 4.9e-11 72.4 53 66.0
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 2.5e-10 70.1 81 48.1
BolC8t50022H Brassica oleracea HOM05D006526 ORTHO05D024464 9.3e-10 68.2 52 61.5
A06p18730 Brassica napus HOM05D006526 ORTHO05D024464 1.0e-08 64.7 95 44.2


User provided reference genes

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