Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000958 Daucus carota HOM05D001087 ORTHO05D005406 2.5e-104 382.1 193 100.0
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 2.7e-82 308.9 191 78.0
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 1.1e-78 297.0 191 75.4
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 1.8e-78 296.2 191 74.3
Lj7A620G39 Lonicera japonica HOM05D001087 ORTHO05D005406 1.2e-77 293.5 193 74.6
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 1.5e-77 293.1 191 75.4
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 4.5e-77 291.6 191 72.8
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 4.5e-77 291.6 191 75.9
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 7.7e-77 290.8 191 74.3
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 1.3e-76 290.0 191 73.3
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 1.7e-76 289.7 191 74.9
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 2.2e-76 289.3 191 73.8
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 2.2e-76 289.3 191 72.8
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 2.9e-76 288.9 191 74.3
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 2.9e-76 288.9 191 71.7
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 1.4e-75 286.6 191 73.3
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 1.4e-75 286.6 190 75.8
Psat0s4626g0040 Pisum sativum HOM05D001087 ORTHO05D005406 1.4e-75 286.6 191 72.3
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 1.9e-75 286.2 191 73.3
Cpa.g.sc70.28 Carica papaya HOM05D001087 ORTHO05D005406 2.5e-75 285.8 191 72.3
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 3.2e-75 285.4 191 73.3
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 3.2e-75 285.4 191 71.7
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 1.2e-74 283.5 191 73.3
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 2.1e-74 282.7 191 72.8
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 1.4e-73 280.0 191 71.7
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 2.3e-73 279.3 191 70.7
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 3.0e-73 278.9 188 75.0
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 3.0e-73 278.9 190 71.6
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 3.0e-73 278.9 191 70.2
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 5.1e-73 278.1 190 71.6
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 6.7e-73 277.7 191 71.7
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 1.1e-72 276.9 192 72.4
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 4.3e-72 275.0 190 71.1
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 9.7e-72 273.9 187 70.6
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 2.2e-71 272.7 185 73.0
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 2.8e-71 272.3 188 70.2
Haze_14337 Corylus avellana HOM05D001087 ORTHO05D005406 3.7e-71 271.9 213 67.6
vmacro22106 Vaccinium macrocarpon HOM05D001087 ORTHO05D005406 3.7e-71 271.9 209 67.5
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 4.8e-71 271.6 189 69.3
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 1.4e-70 270.0 190 70.0
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 9.1e-70 267.3 191 70.2
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 1.2e-69 266.9 194 70.1
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 4.5e-69 265.0 194 68.0
CAN.G473.166 Capsicum annuum HOM05D001087 ORTHO05D005406 1.0e-68 263.8 199 65.8
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 1.3e-68 263.5 191 69.6
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 1.3e-68 263.5 191 69.1
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 1.3e-68 263.5 189 70.9
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 1.7e-68 263.1 199 65.8
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 2.9e-68 262.3 188 70.7
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 2.9e-68 262.3 193 67.4
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 5.0e-68 261.5 191 69.1
ClCG05G012390 Citrullus lanatus HOM05D001087 ORTHO05D005406 6.5e-68 261.2 190 68.9
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 6.5e-68 261.2 191 69.1
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 8.5e-68 260.8 188 68.1
Peaxi162Scf00420g00943 Petunia axillaris HOM05D001087 ORTHO05D005406 4.2e-67 258.5 199 65.8
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 2.7e-66 255.8 187 70.6
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 1.0e-65 253.8 224 61.2
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 3.0e-65 252.3 194 63.9
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 6.7e-65 251.1 193 64.2
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 1.1e-64 250.4 205 63.9
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 2.0e-64 249.6 193 63.7
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 9.7e-64 247.3 194 63.4
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 9.7e-64 247.3 194 63.4
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 1.3e-63 246.9 192 63.5
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 1.7e-63 246.5 194 63.4
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 8.2e-63 244.2 195 62.6
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 1.8e-62 243.0 194 61.9
Eucgr.G01904 Eucalyptus grandis HOM05D001087 ORTHO05D005406 1.8e-62 243.0 194 62.4
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 7.0e-62 241.1 191 64.9
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 7.0e-62 241.1 190 65.3
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 2.6e-61 239.2 189 63.5
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 5.5e-59 231.5 211 57.8
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 9.4e-59 230.7 182 65.9
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.0e-57 227.3 191 60.2
Nitab4.5_0002901g0060 Nicotiana tabacum HOM05D001087 ORTHO05D005406 2.3e-57 226.1 176 65.3
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 3.9e-57 225.3 194 61.9
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 5.2e-57 224.9 180 63.3
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 3.3e-56 222.2 164 68.3
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 9.7e-56 220.7 190 58.4
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 1.8e-54 216.5 176 63.1
FAN14G5757 Fragaria x ananassa HOM05D001087 ORTHO05D005406 2.0e-53 213.0 193 59.1
Solyc02g094600.2 Solanum lycopersicum HOM05D001087 ORTHO05D005406 2.0e-53 213.0 175 61.1
FAN05G2313 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.0e-52 210.7 191 58.1
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.7e-52 209.9 191 58.1
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 2.5e-51 206.1 190 58.9
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 5.7e-48 194.9 119 80.7
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 9.7e-48 194.1 186 54.3
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 1.3e-47 193.7 187 56.7
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 4.8e-47 191.8 162 61.1
HPP92_021630 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.9e-45 184.9 138 65.9
BcaC05g25140 Brassica carinata HOM05D001087 ORTHO05D005406 7.7e-45 184.5 199 52.8
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 1.0e-44 184.1 191 53.4
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 7.2e-43 177.9 189 51.3
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 7.2e-43 177.9 189 51.3
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 8.0e-42 174.5 189 49.2
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 1.8e-38 163.3 160 55.0
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 2.0e-37 159.8 121 67.8
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 2.0e-37 159.8 117 71.8
HPP92_021716 Vanilla planifolia HOM05D001087 ORTHO05D005406 4.9e-31 138.7 169 47.9
SEGI_28776 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 1.1e-30 137.5 111 58.6
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 7.0e-30 134.8 149 51.0
Nitab4.5_0000519g0370 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.3e-28 130.6 156 46.8
Os11g0543800 Oryza sativa ssp. japonica HOM05D001087 ORTHO05D005406 1.2e-16 90.9 71 54.9
Lsat_1_v5_gn_5_71520 Lactuca sativa HOM05D000842 ORTHO05D000650 2.1e-13 80.1 69 62.3
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 2.4e-06 56.6 190 23.2


User provided reference genes

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