Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1741.1 909 100.0
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1360.1 910 76.5
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 0.0e+00 1219.5 910 69.3
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1210.7 911 69.0
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 0.0e+00 1205.3 915 68.6
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1177.5 906 69.0
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 0.0e+00 1162.5 914 66.3
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 0.0e+00 1157.5 908 66.6
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1156.0 913 66.2
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1153.7 902 67.7
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 0.0e+00 1152.9 905 67.0
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 0.0e+00 1150.6 914 65.8
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1149.4 913 65.7
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 0.0e+00 1149.4 914 67.7
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 0.0e+00 1149.0 914 67.8
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 0.0e+00 1147.9 913 68.2
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 0.0e+00 1146.3 917 64.8
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 0.0e+00 1140.9 805 71.9
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 0.0e+00 1137.5 908 65.7
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 0.0e+00 1137.1 810 71.1
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 0.0e+00 1129.8 912 65.1
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 0.0e+00 1128.6 949 62.7
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 0.0e+00 1127.5 907 66.2
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1125.5 807 71.4
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1124.8 908 67.7
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1124.4 802 70.7
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1123.6 910 66.5
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 0.0e+00 1123.6 922 65.1
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 0.0e+00 1121.7 916 65.2
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1121.7 802 70.7
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1120.1 906 66.3
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 0.0e+00 1119.4 799 70.8
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 0.0e+00 1119.4 797 71.8
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1119.4 908 64.8
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1116.3 913 64.6
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 0.0e+00 1112.1 917 63.6
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1108.6 802 70.9
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1107.8 894 64.4
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 0.0e+00 1107.4 922 63.6
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1107.4 904 66.0
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1107.0 910 63.6
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1107.0 912 64.5
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1106.7 908 65.1
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1105.5 911 64.2
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1105.5 906 63.5
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1104.7 908 65.0
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1104.7 924 63.4
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1104.4 906 67.1
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1103.6 918 64.5
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1103.2 911 63.4
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1102.8 908 64.9
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 0.0e+00 1102.0 906 64.2
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1101.3 888 67.0
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 0.0e+00 1100.1 912 62.8
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 0.0e+00 1098.6 779 71.1
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1097.4 906 62.9
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1096.6 890 67.4
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1095.5 902 64.4
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1089.7 802 69.2
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1089.7 918 63.8
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1088.9 904 63.7
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1086.6 905 62.8
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1086.2 909 65.0
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1084.3 803 68.6
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1083.2 920 62.7
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1082.0 908 62.8
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 0.0e+00 1078.9 922 63.1
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1078.9 906 65.9
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1078.9 907 63.7
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 0.0e+00 1078.5 802 68.8
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1076.2 901 62.9
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 6.2e-312 1074.7 933 60.8
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 2.5e-311 1072.0 911 62.5
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 2.5e-311 1072.0 800 68.1
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 1.2e-310 1069.7 953 61.1
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 1.2e-310 1069.7 801 69.4
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 1.6e-310 1069.3 943 61.2
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 4.7e-310 1067.8 906 63.6
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 1.8e-309 1065.8 908 62.9
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 4.0e-309 1064.7 927 62.5
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 4.0e-309 1064.7 908 62.3
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 5.7e-308 1060.8 914 62.1
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 7.5e-308 1060.4 919 61.0
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 3.2e-306 1055.0 746 71.6
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 5.4e-306 1054.3 822 67.4
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 2.7e-305 1052.0 912 61.0
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 4.6e-305 1051.2 916 60.5
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 2.3e-304 1048.9 923 60.7
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 5.6e-303 1044.3 926 60.3
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 2.8e-302 1042.0 913 61.2
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 2.0e-300 1035.8 895 60.2
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 4.4e-300 1034.6 815 65.8
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 1.4e-298 1029.6 912 60.4
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 7.0e-298 1027.3 916 61.0
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 2.7e-297 1025.4 818 65.2
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 4.6e-297 1024.6 810 65.1
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 6.6e-296 1020.8 816 65.9
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 1.9e-295 1019.2 820 65.2
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 2.5e-295 1018.8 908 59.9
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 2.5e-295 1018.8 907 59.9
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 2.5e-295 1018.8 816 65.6
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.5e-295 1018.8 902 62.2
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 3.3e-295 1018.5 811 65.4
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 9.5e-295 1016.9 810 65.6
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 3.6e-294 1015.0 811 65.2
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 4.7e-294 1014.6 814 65.1
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 8.1e-294 1013.8 914 59.6
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 1.8e-293 1012.7 806 64.4
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 8.9e-293 1010.4 812 65.8
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 3.4e-292 1008.4 797 66.0
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 2.2e-291 1005.7 806 64.0
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 4.1e-290 1001.5 775 65.8
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 4.1e-290 1001.5 814 64.4
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 5.4e-290 1001.1 816 64.6
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 9.2e-290 1000.3 912 59.6
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 3.3e-287 991.9 819 63.6
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 4.0e-285 984.9 910 60.1
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 1.2e-281 973.4 915 58.1
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 7.8e-281 970.7 871 60.4
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 1.7e-280 969.5 845 60.5
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 1.1e-279 966.8 806 61.8
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 4.2e-274 948.3 797 62.5
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 6.0e-273 944.5 624 75.3
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 9.6e-271 937.2 1005 53.6
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 2.2e-267 926.0 836 61.1
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 2.7e-265 919.1 588 76.7
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.3e-262 910.2 813 60.8
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 9.3e-258 894.0 902 56.3
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 3.9e-256 888.6 805 57.5
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.1e-255 887.1 803 59.3
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.1e-253 880.6 801 58.4
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 2.9e-251 872.5 811 58.0
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 2.4e-245 852.8 791 57.4
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 1.2e-241 840.5 907 52.7
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 3.9e-240 835.5 815 54.4
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 2.3e-232 809.7 809 53.4
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.3e-230 803.9 620 64.8
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 3.8e-227 792.3 845 53.1
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 5.0e-227 792.0 790 53.4
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 2.5e-226 789.6 805 53.7
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 1.0e-224 784.3 800 54.0
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 2.2e-206 723.4 570 60.2
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 2.1e-201 706.8 583 56.3
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.7e-198 697.2 636 52.2
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 5.2e-192 675.6 615 59.5
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 5.2e-192 675.6 583 53.7
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 2.8e-185 653.3 635 57.5
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 2.6e-183 646.7 620 51.1
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 4.9e-182 642.5 635 57.0
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 2.9e-166 590.1 564 56.6
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 7.3e-162 575.5 786 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 3.9e-139 500.0 573 45.5
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.5e-130 471.5 541 50.3
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.3e-129 468.4 430 58.4
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 5.5e-117 426.4 590 39.7
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 9.4e-109 399.1 488 46.5
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 3.5e-103 380.6 401 53.6
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 8.8e-99 365.9 526 42.0
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 7.2e-93 346.3 703 31.3
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 4.0e-91 340.5 264 64.4
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.2e-82 312.4 222 64.9
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 1.2e-74 285.8 264 57.2
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 8.0e-68 263.1 175 72.0
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 4.1e-64 250.8 524 29.2
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 7.1e-64 250.0 496 31.5
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 3.4e-58 231.1 157 70.7
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 3.4e-34 151.4 187 49.2
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 2.5e-24 118.6 207 36.7
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 1.5e-21 109.4 65 78.5
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 2.1e-20 105.5 74 70.3
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 4.1e-19 101.3 71 63.4
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 2.5e-16 92.0 125 47.2
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 1.2e-10 73.2 74 52.7


User provided reference genes

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