Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 0.0e+00 1556.2 811 100.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 4.2e-294 1014.6 812 66.7
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.2e-283 979.9 824 64.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 5.2e-276 954.5 830 61.7
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 4.4e-275 951.4 814 64.3
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 9.8e-275 950.3 823 62.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.5e-270 935.6 798 62.8
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.0e-269 930.6 809 61.7
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.0e-268 930.2 821 60.8
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.0e-268 930.2 828 63.0
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 5.2e-268 927.9 798 62.2
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.0e-267 926.0 827 61.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.4e-267 925.2 801 62.9
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.8e-267 923.7 801 62.8
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 9.8e-267 923.7 806 61.9
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 2.2e-266 922.5 800 62.6
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 3.7e-266 921.8 798 62.0
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.4e-265 919.8 827 60.9
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.1e-265 918.3 801 62.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.2e-264 916.8 800 62.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.8e-263 911.8 823 58.9
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 1.1e-262 910.2 789 62.0
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 3.3e-262 908.7 820 59.5
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.2e-261 906.7 803 61.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 2.6e-259 899.0 795 62.1
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.4e-259 898.7 795 62.0
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.3e-258 896.7 825 60.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 3.7e-258 895.2 832 59.6
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 6.4e-258 894.4 803 60.9
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 2.4e-257 892.5 823 58.0
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 3.2e-257 892.1 823 58.1
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.0e-256 889.4 823 57.8
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.5e-256 888.6 827 59.0
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.5e-256 888.6 823 58.1
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 1.3e-255 886.7 823 59.1
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.1e-253 879.4 790 60.8
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 6.8e-252 874.4 793 58.3
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.2e-251 873.6 797 60.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 4.9e-250 868.2 801 57.6
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 6.4e-250 867.8 815 56.6
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 7.0e-249 864.4 815 56.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 9.5e-246 854.0 820 58.4
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.8e-245 852.4 823 56.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 5.2e-244 848.2 800 56.4
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 5.2e-244 848.2 823 56.6
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.4e-241 840.1 800 56.1
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.9e-241 839.7 805 56.8
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.4e-241 838.2 827 55.0
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 6.0e-240 834.7 815 56.7
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.0e-239 833.9 812 58.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.7e-239 833.2 799 56.6
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 6.6e-239 831.2 821 55.5
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.1e-233 813.9 749 57.1
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.6e-232 810.1 831 54.3
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.1e-232 809.7 802 54.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.5e-230 802.7 802 57.1
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 9.0e-228 794.3 811 55.9
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.6e-227 792.7 755 58.8
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 4.4e-227 792.0 805 53.7
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.2e-226 789.6 798 53.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 4.2e-225 785.4 798 53.5
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 5.4e-225 785.0 831 52.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.5e-222 776.2 793 55.5
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 4.8e-221 771.9 825 52.6
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 6.2e-221 771.5 801 52.6
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.2e-218 763.1 833 53.4
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 8.4e-218 761.1 832 51.3
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.2e-216 757.3 806 51.5
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 7.9e-216 754.6 809 51.5
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 3.9e-215 752.3 824 51.6
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 4.8e-213 745.3 824 52.1
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 4.8e-213 745.3 823 51.9
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 4.8e-213 745.3 818 51.2
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.7e-210 736.9 808 52.0
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 3.8e-210 735.7 648 62.7
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 4.9e-210 735.3 825 50.9
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 8.4e-210 734.6 825 51.2
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 5.5e-209 731.9 793 52.2
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 5.5e-209 731.9 793 52.2
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 7.9e-208 728.0 798 52.5
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.3e-207 726.5 806 51.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 6.7e-207 724.9 812 51.0
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.3e-206 722.2 743 53.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.6e-205 720.3 750 53.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 6.9e-204 714.9 799 51.8
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.0e-203 713.4 793 52.7
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 8.7e-199 698.0 607 63.3
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 6.3e-197 691.8 818 47.8
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 4.1e-196 689.1 799 50.3
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 6.1e-192 675.2 838 46.9
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 7.0e-180 635.2 607 58.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 8.5e-170 601.7 808 44.8
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.4e-164 584.3 738 49.7
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-163 581.3 551 60.6
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 5.9e-155 552.4 608 51.8
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.5e-153 547.0 478 63.4
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 6.8e-151 538.9 788 42.0
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.0e-146 525.0 393 67.7
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.1e-136 490.7 578 49.3
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.1e-132 478.4 764 38.5
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.8e-128 463.8 770 42.5
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.2e-117 427.6 342 64.9
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 3.0e-114 417.2 509 48.7
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.4e-102 377.1 299 64.5
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 6.5e-93 346.3 286 63.3
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 9.3e-92 342.4 907 29.2
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.0e-91 339.7 481 48.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 7.4e-89 332.8 865 30.5
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-85 322.0 294 59.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.3e-80 305.4 224 70.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.4e-71 274.6 190 71.6
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 4.4e-65 253.8 817 29.4
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.9e-60 238.4 251 50.2
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 4.5e-54 217.2 529 28.7
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 7.7e-54 216.5 522 32.6
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.4e-47 193.7 224 49.6
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.5e-44 184.9 588 29.3
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 4.6e-22 110.9 218 41.3
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 1.3e-21 109.4 71 71.8
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 3.4e-17 94.7 643 21.8


User provided reference genes

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