Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 1.5e-106 389.4 188 100.0
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 7.3e-40 167.9 143 62.2
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 2.1e-39 166.4 164 57.9
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 8.1e-39 164.5 120 70.0
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 1.1e-38 164.1 151 58.9
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 1.4e-38 163.7 107 74.8
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.4e-38 163.7 100 79.0
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.8e-38 163.3 120 69.2
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 2.3e-38 162.9 105 75.2
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 4.0e-38 162.2 103 77.7
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 5.2e-38 161.8 101 78.2
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 5.2e-38 161.8 100 78.0
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 5.2e-38 161.8 120 67.5
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 6.8e-38 161.4 131 65.6
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 1.2e-37 160.6 119 71.4
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 1.5e-37 160.2 117 69.2
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 2.0e-37 159.8 110 73.6
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 2.0e-37 159.8 109 69.7
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 2.0e-37 159.8 167 54.5
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 2.0e-37 159.8 139 59.7
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 2.6e-37 159.5 131 66.4
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 3.4e-37 159.1 107 71.0
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.4e-37 159.1 107 71.0
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 3.4e-37 159.1 137 62.8
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 4.4e-37 158.7 143 62.9
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 7.5e-37 157.9 161 57.8
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 7.5e-37 157.9 107 71.0
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 7.5e-37 157.9 108 75.0
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 9.9e-37 157.5 105 74.3
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 9.9e-37 157.5 139 59.0
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 9.9e-37 157.5 141 61.0
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 9.9e-37 157.5 157 59.2
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 9.9e-37 157.5 126 69.0
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.3e-36 157.1 116 72.4
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 1.3e-36 157.1 100 73.0
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 1.7e-36 156.8 161 57.1
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 1.7e-36 156.8 139 63.3
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 1.7e-36 156.8 102 76.5
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 2.2e-36 156.4 125 64.8
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 2.2e-36 156.4 145 57.9
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 2.9e-36 156.0 134 64.2
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 2.9e-36 156.0 157 58.6
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 3.7e-36 155.6 107 72.0
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 4.9e-36 155.2 105 71.4
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 4.9e-36 155.2 78 87.2
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 4.9e-36 155.2 117 71.8
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 4.9e-36 155.2 78 87.2
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 4.9e-36 155.2 78 87.2
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 6.4e-36 154.8 104 70.2
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 8.3e-36 154.5 114 70.2
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 1.1e-35 154.1 103 72.8
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.1e-35 154.1 134 63.4
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.1e-35 154.1 117 70.9
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 1.4e-35 153.7 102 70.6
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 1.4e-35 153.7 102 70.6
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 1.4e-35 153.7 123 65.9
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.9e-35 153.3 140 59.3
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 4.1e-35 152.1 105 70.5
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 4.1e-35 152.1 107 69.2
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 5.4e-35 151.8 100 70.0
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 7.1e-35 151.4 105 69.5
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 1.2e-34 150.6 106 68.9
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 1.2e-34 150.6 105 69.5
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 1.6e-34 150.2 105 68.6
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 1.6e-34 150.2 105 68.6
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 1.6e-34 150.2 105 68.6
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 2.1e-34 149.8 105 68.6
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 3.5e-34 149.1 139 59.0
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 4.6e-34 148.7 105 67.6
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 4.6e-34 148.7 105 67.6
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 4.6e-34 148.7 105 67.6
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 6.0e-34 148.3 97 71.1
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 6.0e-34 148.3 96 72.9
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 7.8e-34 147.9 139 57.6
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 1.0e-33 147.5 94 74.5
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 1.0e-33 147.5 106 67.9
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 1.3e-33 147.1 111 68.5
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 1.7e-33 146.7 144 53.5
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 1.7e-33 146.7 113 66.4
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 1.7e-33 146.7 109 65.1
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 6.6e-33 144.8 114 68.4
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 8.6e-33 144.4 104 66.3
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 1.1e-32 144.1 71 85.9
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.5e-32 143.7 108 64.8
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 1.9e-32 143.3 104 65.4
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 4.3e-32 142.1 76 82.9
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 2.1e-31 139.8 143 54.5
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 3.6e-31 139.0 68 86.8
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 2.0e-29 133.3 78 73.1
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 2.0e-29 133.3 79 73.4
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 4.4e-29 132.1 86 65.1
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 2.9e-28 129.4 93 65.6
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 6.4e-28 128.3 109 59.6
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 5.6e-24 115.2 108 52.8
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 7.3e-24 114.8 147 49.7
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 2.8e-23 112.8 84 70.2
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 5.2e-22 108.6 49 93.9
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 6.9e-22 108.2 50 94.0
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 6.9e-22 108.2 144 50.7
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 2.0e-21 106.7 79 69.6
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 2.6e-21 106.3 83 68.7
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.6e-21 106.3 109 45.9
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 5.8e-21 105.1 78 66.7
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 2.2e-20 103.2 85 56.5
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.1e-19 100.9 81 65.4
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.1e-19 100.9 81 65.4
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.1e-19 100.9 81 65.4
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.1e-19 100.9 81 65.4
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 1.9e-19 100.1 62 77.4
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.9e-19 100.1 85 51.8
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 1.9e-19 100.1 74 63.5
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 9.3e-19 97.8 97 51.5
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 4.6e-18 95.5 118 41.5
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 3.0e-17 92.8 67 53.7
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 3.0e-17 92.8 79 60.8
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 1.6e-10 70.5 41 75.6
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 2.1e-10 70.1 78 46.2
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea HOM05D005851 ORTHO05D007137 3.3e-08 62.8 72 50.0
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 1.3e-07 60.8 28 89.3
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 2.1e-07 60.1 42 64.3
Lj2C204G6 Lonicera japonica HOM05D005851 ORTHO05D007137 2.8e-07 59.7 53 58.5
Aa31LG6G4700 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.4e-06 57.4 34 73.5
Cfa020517 Carpinus fangiana HOM05D005851 ORTHO05D007137 1.8e-06 57.0 102 48.0
BcaC09g48268 Brassica carinata HOM05D002423 ORTHO05D007137 4.0e-06 55.8 68 50.0
C01p52310 Brassica napus HOM05D002423 ORTHO05D007137 4.0e-06 55.8 68 50.0


User provided reference genes

Program Settings