Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000813 Daucus carota HOM05D004557 ORTHO05D005258 1.2e-203 713.0 356 100.0
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 1.7e-42 177.6 340 32.6
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 1.1e-41 174.9 308 36.0
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 1.1e-41 174.9 372 32.0
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 2.5e-41 173.7 372 31.5
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 2.5e-41 173.7 372 31.5
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 3.3e-41 173.3 235 37.4
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 5.6e-41 172.6 321 33.6
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 1.6e-40 171.0 339 33.9
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 3.1e-39 166.8 243 36.2
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 1.7e-37 161.0 329 30.4
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 2.4e-36 157.1 316 32.3
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 7.1e-36 155.6 254 35.4
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 7.1e-36 155.6 237 36.7
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 7.8e-35 152.1 298 33.2
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 2.3e-34 150.6 256 34.8
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 3.0e-34 150.2 257 35.0
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 5.1e-34 149.4 253 34.4
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 1.5e-33 147.9 236 33.9
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.5e-33 147.9 257 34.6
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.9e-33 147.5 253 34.4
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 2.5e-33 147.1 339 30.4
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 4.3e-33 146.4 257 34.6
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.6e-33 146.0 253 34.0
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.6e-33 146.0 253 34.0
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 1.3e-32 144.8 346 28.0
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 3.6e-32 143.3 315 29.2
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 4.8e-32 142.9 236 36.4
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 8.1e-32 142.1 244 33.6
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 8.1e-32 142.1 322 32.9
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.4e-31 141.4 235 34.9
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 1.4e-31 141.4 248 31.0
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 2.4e-31 140.6 352 29.0
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 4.0e-31 139.8 215 34.0
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 1.2e-30 138.3 285 29.8
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 3.4e-30 136.7 365 26.6
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 3.4e-30 136.7 250 35.2
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 7.6e-30 135.6 327 28.1
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 9.9e-30 135.2 245 30.2
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 1.3e-29 134.8 252 31.3
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 1.3e-29 134.8 323 29.7
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 1.7e-29 134.4 314 30.9
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 1.7e-29 134.4 236 35.6
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 1.7e-29 134.4 256 32.0
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 2.9e-29 133.7 242 33.5
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 4.9e-29 132.9 236 30.5
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 4.9e-29 132.9 249 32.5
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 6.4e-29 132.5 281 31.3
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 6.4e-29 132.5 237 32.1
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 5.4e-28 129.4 292 28.8
HPP92_024782 Vanilla planifolia HOM05D004557 ORTHO05D005258 5.4e-28 129.4 245 33.9
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 1.6e-27 127.9 245 32.7
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 1.0e-26 125.2 240 31.7
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 1.3e-26 124.8 260 29.6
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 2.3e-26 124.0 127 47.2
DCAR_004388 Daucus carota HOM05D004557 ORTHO05D005258 3.9e-26 123.2 171 38.6
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 5.1e-26 122.9 237 32.5
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 1.5e-25 121.3 206 34.0
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 2.5e-25 120.6 260 30.4
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 3.3e-25 120.2 269 30.5
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 4.3e-25 119.8 242 32.2
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 4.3e-25 119.8 224 33.0
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 1.6e-24 117.9 203 35.0
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 4.8e-24 116.3 251 32.3
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 4.8e-24 116.3 266 31.6
FAN08G0395 Fragaria x ananassa HOM05D004557 ORTHO05D005258 8.1e-24 115.5 253 29.2
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.4e-23 114.8 255 29.8
FAN13G2684 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.4e-23 114.8 253 28.9
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 2.4e-23 114.0 273 27.8
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 5.3e-23 112.8 198 35.9
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 6.9e-23 112.5 256 25.4
FvH4_5g32040 Fragaria vesca HOM05D004557 ORTHO05D005258 1.2e-22 111.7 253 28.9
FAN18G0835 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.2e-22 111.7 253 28.9
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 1.2e-22 111.7 264 28.8
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 1.2e-22 111.7 267 26.6
FAN04G2671 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.5e-22 111.3 255 28.2
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 2.6e-22 110.5 283 27.9
Sopen08g017790 Solanum pennellii HOM05D004557 ORTHO05D005258 3.4e-22 110.2 240 31.7
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 7.6e-22 109.0 292 27.4
Solyc08g062200.3 Solanum lycopersicum HOM05D002542 ORTHO05D010145 9.9e-22 108.6 242 31.8
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 4.9e-21 106.3 268 25.0
Peaxi162Scf00809g00213 Petunia axillaris HOM05D002542 ORTHO05D010145 8.4e-21 105.5 279 26.9
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 2.4e-20 104.0 280 28.6
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 4.2e-20 103.2 95 48.4
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 4.2e-20 103.2 262 26.0
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 7.1e-20 102.4 221 29.0
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 1.6e-19 101.3 248 28.6
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 1.6e-19 101.3 248 28.6
Aa31LG11G13510 Aethionema arabicum HOM05D004557 ORTHO05D005258 6.0e-19 99.4 256 28.9
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 7.9e-19 99.0 248 29.4
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 7.9e-19 99.0 248 29.4
Eucgr.J00345 Eucalyptus grandis HOM05D004557 ORTHO05D005258 7.9e-19 99.0 190 31.6
BcaNung02221 Brassica carinata HOM05D004557 ORTHO05D005258 1.0e-18 98.6 243 30.9
Nitab4.5_0007748g0010 Nicotiana tabacum HOM05D002542 ORTHO05D010145 1.0e-18 98.6 222 29.3
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 1.0e-18 98.6 120 40.0
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 2.3e-18 97.4 181 32.6
CDE05G1912 Ceratophyllum demersum HOM05D004557 ORTHO05D005258 5.1e-18 96.3 285 26.7
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 1.5e-17 94.7 111 39.6
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 2.5e-17 94.0 250 27.2
Zm00001eb133740 Zea mays HOM05D004557 ORTHO05D005258 7.4e-17 92.4 274 31.4
AT5G16100 Arabidopsis thaliana HOM05D004557 ORTHO05D005258 9.6e-17 92.0 274 26.3
Carub.0008s1244 Capsella rubella HOM05D004557 ORTHO05D005258 2.1e-16 90.9 350 25.7
Thecc.09G060300 Theobroma cacao HOM05D004557 ORTHO05D005258 2.1e-16 90.9 239 29.3
Eucgr.L01064 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.8e-16 90.5 190 29.5
Glyma.20G016100 Glycine max HOM05D004557 ORTHO05D005258 5.3e-15 86.3 143 35.0
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 9.0e-15 85.5 83 44.6
BraA02t05309Z Brassica rapa HOM05D004557 ORTHO05D005258 2.0e-14 84.3 244 28.7
BcaC03g18467 Brassica carinata HOM05D004557 ORTHO05D005258 5.8e-14 82.8 243 28.8
C02p08140 Brassica napus HOM05D004557 ORTHO05D005258 5.8e-14 82.8 243 28.8
Mapoly0049s0118 Marchantia polymorpha HOM05D004557 ORTHO05D005258 5.8e-14 82.8 225 28.9
A02p03380 Brassica napus HOM05D004557 ORTHO05D005258 1.0e-13 82.0 244 28.7
BolC2t06737H Brassica oleracea HOM05D004557 ORTHO05D005258 2.2e-13 80.9 243 27.6
Pp3c24_6460 Physcomitrium patens HOM05D004557 ORTHO05D005258 2.5e-12 77.4 274 25.5
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 7.1e-12 75.9 91 39.6
Thecc.05G143900 Theobroma cacao HOM05D004557 ORTHO05D005258 7.9e-11 72.4 153 30.7
Eucgr.I00413 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.3e-10 70.9 190 27.9
Sp6g28040 Schrenkiella parvula HOM05D004557 ORTHO05D005258 3.0e-10 70.5 97 36.1
Gohir.D08G268633 Gossypium hirsutum HOM05D004557 ORTHO05D005258 8.7e-10 68.9 107 36.4
Actinidia29314 Actinidia chinensis HOM05D004557 ORTHO05D005258 7.4e-09 65.9 86 41.9
FAN10G1667 Fragaria x ananassa HOM05D004557 ORTHO05D005258 6.3e-08 62.8 314 21.3
CsaV3_4G035930 Cucumis sativus L. HOM05D004557 ORTHO05D005258 1.8e-07 61.2 179 27.4
unitig_750.g28413 Utricularia gibba HOM05D004557 ORTHO05D005258 1.8e-07 61.2 185 27.0
Carub.0006s1429 Capsella rubella HOM05D004557 ORTHO05D005258 2.4e-07 60.8 110 30.0
THA.LOC104820951 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 3.1e-07 60.5 61 47.5
Carub.0002s0764 Capsella rubella HOM05D004557 ORTHO05D005258 5.3e-07 59.7 110 29.1
Carub.0055s0004 Capsella rubella HOM05D004557 ORTHO05D005258 5.3e-07 59.7 110 29.1
Sc23g0004270 Simmondsia chinensis HOM05D004557 ORTHO05D005258 9.0e-07 58.9 100 30.0
Sabra07G0108400 Salix brachista HOM05D000455 ORTHO05D000434 1.2e-06 58.5 194 25.3
Sabra07G0120700 Salix brachista HOM05D000455 ORTHO05D000434 1.2e-06 58.5 194 25.3
MELO3C016901.2 Cucumis melo HOM05D004557 ORTHO05D005258 2.0e-06 57.8 94 33.0
FAN10G3179 Fragaria x ananassa HOM05D018527 ORTHO05D005258 2.0e-06 57.8 98 32.7
CARHR197200 Cardamine hirsuta HOM05D004557 ORTHO05D005258 3.4e-06 57.0 97 35.1
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 4.5e-06 56.6 181 24.3
Glyma.06G054951 Glycine max HOM05D004557 ORTHO05D005258 5.9e-06 56.2 59 45.8
Gohir.A10G141200 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.0e-05 55.5 69 40.6
Gohir.D10G125700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.0e-05 55.5 70 37.1
Gorai.011G138700 Gossypium raimondii HOM05D000455 ORTHO05D000434 1.0e-05 55.5 69 40.6
Manes.11G127000 Manihot esculenta HOM05D000455 ORTHO05D000434 1.0e-05 55.5 186 23.7


User provided reference genes

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