Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000803 Daucus carota HOM05D000123 ORTHO05D000064 1.8e-90 335.9 171 100.0
DCAR_004405 Daucus carota HOM05D000123 ORTHO05D000064 2.0e-36 156.4 173 53.2
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 6.0e-17 91.7 178 37.6
CSS0014079 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 3.7e-14 82.4 179 35.2
Thecc.09G056300 Theobroma cacao HOM05D000123 ORTHO05D000064 6.9e-13 78.2 189 33.3
Duzib168G0691 Durio zibethinus HOM05D000123 ORTHO05D000064 1.2e-12 77.4 180 34.4
Lj8P532T10 Lonicera japonica HOM05D000123 ORTHO05D000064 2.0e-12 76.6 188 34.0
TWI63G1398 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 2.6e-12 76.3 161 35.4
Duzib187G0851 Durio zibethinus HOM05D000123 ORTHO05D000064 3.4e-12 75.9 186 34.4
CAN.G20.1 Capsicum annuum HOM05D000123 ORTHO05D000064 7.6e-12 74.7 185 34.1
QL02p000947 Quercus lobata HOM05D000123 ORTHO05D000064 7.6e-12 74.7 179 38.5
Lj8P532T11 Lonicera japonica HOM05D000123 ORTHO05D000064 1.3e-11 73.9 188 34.6
Lj8P531T41 Lonicera japonica HOM05D000123 ORTHO05D000064 3.8e-11 72.4 186 33.3
Potri.006G226800 Populus trichocarpa HOM05D000123 ORTHO05D000064 3.8e-11 72.4 185 33.5
Glyma.04G052000 Glycine max HOM05D000123 ORTHO05D000064 8.4e-11 71.2 180 30.6
Peaxi162Scf00327g00413 Petunia axillaris HOM05D000123 ORTHO05D000064 8.4e-11 71.2 163 35.6
Solyc08g062960.4 Solanum lycopersicum HOM05D000123 ORTHO05D000064 8.4e-11 71.2 162 36.4
COL.COLO4_21078 Corchorus olitorius HOM05D000123 ORTHO05D000064 1.1e-10 70.9 178 31.5
TAR383G0684 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.1e-10 70.9 194 32.5
Sopen08g018510 Solanum pennellii HOM05D000123 ORTHO05D000064 1.4e-10 70.5 176 34.1
Gohir.D13G194400 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.2e-10 69.3 182 34.6
Gorai.013G220400 Gossypium raimondii HOM05D000123 ORTHO05D000064 4.2e-10 68.9 182 34.1
Lj8C533G1 Lonicera japonica HOM05D000123 ORTHO05D000064 7.1e-10 68.2 187 33.2
Nitab4.5_0006852g0070 Nicotiana tabacum HOM05D000123 ORTHO05D000064 7.1e-10 68.2 184 33.2
HanXRQChr13g0409921 Helianthus annuus HOM05D000123 ORTHO05D000064 1.2e-09 67.4 170 33.5
Gohir.A13G187500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 1.6e-09 67.0 182 33.5
Haze_18164 Corylus avellana HOM05D000123 ORTHO05D000064 2.1e-09 66.6 193 33.7
AUR62009126 Chenopodium quinoa HOM05D000123 ORTHO05D000064 2.7e-09 66.2 181 30.4
Hma1.2p1_0544F.1_g175700 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 2.7e-09 66.2 177 34.5
Rhsim11G0043100 Rhododendron simsii HOM05D000123 ORTHO05D000064 3.5e-09 65.9 183 31.7
AUR62039129 Chenopodium quinoa HOM05D000123 ORTHO05D000064 4.6e-09 65.5 181 30.4
ClCG08G017080 Citrullus lanatus HOM05D000123 ORTHO05D000064 4.6e-09 65.5 176 31.2
Prupe.1G410400 Prunus persica HOM05D000123 ORTHO05D000064 6.1e-09 65.1 180 31.1
QL11p022570 Quercus lobata HOM05D000123 ORTHO05D000064 7.9e-09 64.7 171 38.0
vmacro00130 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.0e-08 64.3 182 34.1
MBI01_g20343_MAGBIO Magnolia biondii HOM05D000123 ORTHO05D000064 1.8e-08 63.5 189 29.1
PGSC0003DMG400008223 Solanum tuberosum HOM05D000123 ORTHO05D000064 1.8e-08 63.5 178 32.6
Lj1g0019749 Lotus japonicus HOM05D000123 ORTHO05D000064 3.9e-08 62.4 190 32.1
Hma1.2p1_0544F.1_g175690 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 8.7e-08 61.2 176 31.2
Glyma.14G096800 Glycine max HOM05D000123 ORTHO05D000064 1.5e-07 60.5 175 32.0
Cc08_g10810 Coffea canephora HOM05D000123 ORTHO05D000064 2.5e-07 59.7 183 31.1
Medtr3g104550 Medicago truncatula HOM05D000123 ORTHO05D000064 3.3e-07 59.3 182 32.4
EL10Ac2g03834 Beta vulgaris HOM05D000123 ORTHO05D000064 4.3e-07 58.9 133 30.1
Ciclev10008617m.g Citrus clementina HOM05D000123 ORTHO05D000064 5.7e-07 58.5 190 30.0
TAR624G0010 Trochodendron aralioides HOM05D000123 ORTHO05D000064 5.7e-07 58.5 187 29.4
MELO3C010748.2 Cucumis melo HOM05D000123 ORTHO05D000064 7.4e-07 58.2 178 29.8
RcHm_v2.0_Chr6g0311151 Rosa chinensis HOM05D000123 ORTHO05D000064 9.7e-07 57.8 184 33.2
Hund03328 Selenicereus undatus HOM05D000123 ORTHO05D000064 9.7e-07 57.8 179 30.7
FvH4_2g31690 Fragaria vesca HOM05D000123 ORTHO05D000064 1.3e-06 57.4 181 31.5
CsaV3_2G025510 Cucumis sativus L. HOM05D000123 ORTHO05D000064 1.6e-06 57.0 181 29.3
PGR044G1506 Punica granatum HOM05D000123 ORTHO05D000064 1.6e-06 57.0 180 32.2
Ca_15824_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 2.2e-06 56.6 173 31.2
Ca_15858_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 2.2e-06 56.6 173 31.2
MD15G1057700 Malus domestica HOM05D000123 ORTHO05D000064 2.8e-06 56.2 183 30.6
Sed0025709 Sechium edule HOM05D000123 ORTHO05D000064 2.8e-06 56.2 186 31.2
FAN27G2195 Fragaria x ananassa HOM05D000123 ORTHO05D000064 3.7e-06 55.8 181 30.9
Dinv22884 Davidia involucrata HOM05D000123 ORTHO05D000064 6.3e-06 55.1 168 31.5
FAN15G2073 Fragaria x ananassa HOM05D000123 ORTHO05D000064 8.2e-06 54.7 181 30.4


User provided reference genes

Program Settings