Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 1.5e-283 978.8 484 100.0
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.2e-240 836.3 484 84.3
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 4.4e-238 827.8 484 83.5
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.7e-237 825.9 484 82.9
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 3.6e-232 808.1 484 82.2
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 4.7e-232 807.7 484 81.6
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 2.6e-230 802.0 484 80.4
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 8.2e-229 797.0 485 80.0
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.8e-228 795.8 485 80.2
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 2.4e-228 795.4 485 80.8
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.6e-227 792.7 483 79.7
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.5e-227 791.6 484 79.5
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 5.9e-227 790.8 485 80.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 2.9e-226 788.5 484 79.8
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 3.8e-226 788.1 489 79.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 8.5e-226 786.9 488 78.5
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.1e-225 786.6 486 78.8
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.5e-225 785.4 483 79.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 3.2e-225 785.0 484 78.7
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.2e-225 785.0 484 78.5
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 3.2e-225 785.0 485 79.6
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.2e-224 783.1 483 79.1
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.1e-224 782.3 488 78.7
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.1e-224 782.3 484 78.9
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 2.7e-224 781.9 483 78.5
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 3.6e-224 781.6 486 78.8
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.6e-224 781.6 484 79.1
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 4.7e-224 781.2 484 79.3
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 4.7e-224 781.2 437 85.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 8.0e-224 780.4 486 78.8
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.0e-223 780.0 484 78.3
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.0e-223 780.0 484 78.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.4e-223 779.6 483 78.3
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.8e-223 779.2 484 78.7
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.8e-223 779.2 484 78.3
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.3e-223 778.9 484 78.5
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 2.3e-223 778.9 486 77.8
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 5.2e-223 777.7 484 78.1
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 6.8e-223 777.3 484 77.7
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.8e-223 776.9 484 78.7
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.0e-222 775.8 484 78.3
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.0e-222 775.8 487 77.6
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.6e-222 775.4 486 78.2
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.4e-222 775.0 484 78.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 7.5e-222 773.9 483 78.5
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 9.8e-222 773.5 485 77.5
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.3e-221 773.1 486 77.0
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 2.2e-221 772.3 485 77.5
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 2.8e-221 771.9 485 78.4
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 6.3e-221 770.8 486 78.2
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.3e-221 770.8 485 77.9
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.1e-220 770.0 493 78.5
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 3.1e-220 768.5 484 77.3
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 4.1e-220 768.1 486 77.6
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.1e-220 768.1 490 77.3
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 7.0e-220 767.3 486 77.0
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 9.1e-220 766.9 484 77.7
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-219 766.5 486 76.5
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 1.6e-219 766.1 484 77.1
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.6e-219 766.1 490 77.1
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 4.5e-219 764.6 516 73.6
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.3e-218 763.1 486 77.8
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 3.8e-218 761.5 487 76.8
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 3.8e-218 761.5 485 77.3
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 3.8e-218 761.5 485 77.1
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.5e-217 759.6 488 77.0
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.2e-217 758.4 485 75.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 9.5e-217 756.9 485 77.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 9.5e-217 756.9 487 77.0
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.1e-216 755.7 487 77.0
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.8e-215 752.7 484 76.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.5e-214 747.3 484 76.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 2.2e-213 745.7 483 76.4
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.7e-213 745.0 484 76.4
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 4.9e-213 744.6 482 76.3
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 6.3e-213 744.2 485 76.3
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.8e-212 742.7 490 75.1
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.8e-212 742.7 490 75.1
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 5.4e-212 741.1 484 75.6
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 9.2e-212 740.3 415 84.3
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 9.2e-212 740.3 484 76.4
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.3e-210 735.7 484 75.2
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.9e-210 735.3 485 74.8
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.9e-209 732.6 485 74.6
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 5.6e-209 731.1 393 87.5
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 7.3e-209 730.7 396 86.9
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 9.5e-209 730.3 396 86.9
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 9.5e-209 730.3 484 74.6
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 2.1e-208 729.2 489 74.0
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 3.6e-208 728.4 482 74.3
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 8.0e-208 727.2 484 74.2
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.0e-207 726.9 394 87.1
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.3e-207 725.7 486 74.5
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.3e-207 725.7 495 74.5
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 5.2e-207 724.5 484 74.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 2.0e-206 722.6 393 86.5
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.6e-206 722.2 482 73.7
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.2e-205 719.2 487 72.9
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.4e-198 695.3 452 75.7
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 6.0e-195 684.5 449 75.3
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.3e-194 682.6 398 78.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.6e-192 676.4 412 76.9
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 8.1e-192 674.1 429 73.9
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.2e-190 670.2 400 78.8
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 5.4e-188 661.4 482 69.1
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 6.2e-184 647.9 389 76.6
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 7.1e-180 634.4 384 80.2
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 7.3e-177 624.4 392 74.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.9e-172 609.8 433 70.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 2.0e-166 589.7 389 68.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.7e-165 586.6 484 63.0
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 5.4e-164 581.6 399 66.9
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.9e-157 559.3 289 91.3
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.5e-153 546.2 289 90.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.9e-138 495.7 343 71.1
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.1e-137 494.2 351 70.4
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.1e-103 379.4 237 75.9
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.6e-101 371.7 275 68.7
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-79 301.2 172 82.0
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.6e-59 233.4 196 59.7
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-58 230.7 135 81.5
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.9e-57 225.3 130 81.5
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.2e-56 224.2 139 77.7
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 2.6e-49 200.7 140 72.9
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 4.8e-43 179.9 160 59.4
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.6e-35 154.8 94 78.7
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.8e-32 143.7 105 65.7
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 2.3e-13 81.3 59 66.1
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 5.3e-10 70.1 279 25.1
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.0e-08 65.9 288 25.3
Oeu029778.1 Olea europaea HOM05D000776 ORTHO05D001624 1.5e-07 62.0 166 25.3
MD09G1137100 Malus domestica HOM05D000776 ORTHO05D002281 4.2e-07 60.5 408 24.3
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 9.4e-07 59.3 163 26.4
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.6e-06 58.5 158 26.6
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.6e-06 58.5 158 24.7
Haze_27503 Corylus avellana HOM05D000776 ORTHO05D002281 3.6e-06 57.4 175 26.9
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 4.7e-06 57.0 151 30.5


User provided reference genes

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