Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 9.4e-202 706.8 405 100.0
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 4.5e-180 634.8 405 83.7
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 3.9e-91 339.3 410 48.0
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.9e-83 312.8 418 45.9
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.5e-82 310.8 423 45.6
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.3e-82 309.7 331 52.3
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.1e-80 304.7 427 44.3
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.4e-80 303.5 336 52.7
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 4.5e-79 299.3 419 43.4
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 4.5e-79 299.3 426 43.9
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.5e-77 294.3 409 43.8
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 9.4e-77 291.6 287 53.3
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.2e-76 291.2 422 42.7
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 6.1e-76 288.9 409 46.0
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 8.0e-76 288.5 286 52.1
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 8.0e-76 288.5 412 44.9
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 1.0e-75 288.1 294 54.1
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.8e-75 287.3 330 50.9
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.0e-74 283.9 317 51.1
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.7e-73 280.8 322 50.0
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.2e-73 280.4 409 42.5
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 2.2e-73 280.4 323 49.5
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 3.7e-73 279.6 348 48.3
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 4.8e-73 279.3 328 49.1
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.1e-72 278.1 292 52.1
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 7.0e-72 275.4 330 47.9
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.0e-71 273.9 321 51.7
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.2e-70 270.4 321 51.1
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 3.8e-70 269.6 293 49.5
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 7.2e-69 265.4 292 50.3
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.7e-68 263.5 320 47.2
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 8.0e-68 261.9 340 46.5
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 8.0e-68 261.9 283 49.5
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.0e-67 261.5 378 42.3
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.8e-67 260.8 327 48.9
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 2.3e-67 260.4 327 47.7
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 2.3e-67 260.4 283 49.1
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 3.0e-67 260.0 322 47.5
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.2e-66 258.1 283 49.1
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.6e-66 256.9 285 48.4
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 2.6e-66 256.9 374 41.7
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 5.7e-66 255.8 374 41.2
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 7.5e-66 255.4 325 44.9
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.3e-65 254.6 320 47.5
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 2.2e-65 253.8 329 46.5
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.7e-65 253.1 337 46.3
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.7e-65 253.1 326 46.6
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 1.4e-64 251.1 298 47.7
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 2.4e-64 250.4 467 37.0
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.4e-64 250.4 334 46.1
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.0e-64 248.8 427 40.3
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.7e-63 246.9 312 46.5
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 4.5e-63 246.1 403 38.7
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 7.7e-63 245.4 313 46.6
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.3e-62 244.6 311 46.9
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.3e-62 244.6 346 44.2
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.3e-62 243.8 314 46.5
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.3e-62 243.8 314 46.5
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 3.8e-62 243.0 319 45.8
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 8.6e-62 241.9 322 44.4
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.5e-61 241.1 271 49.8
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 9.5e-61 238.4 317 46.4
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.6e-60 237.7 338 44.7
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 3.6e-60 236.5 322 43.8
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 6.1e-60 235.7 375 40.0
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 6.1e-60 235.7 340 44.1
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 6.1e-60 235.7 415 39.0
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.0e-59 235.0 319 43.9
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.8e-59 234.2 276 48.9
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 6.8e-59 232.3 309 47.2
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 8.9e-59 231.9 317 43.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 8.9e-59 231.9 306 45.1
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 2.6e-58 230.3 310 43.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 3.4e-58 229.9 396 39.1
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 4.4e-58 229.6 160 68.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.5e-58 228.8 292 45.9
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 2.2e-57 227.3 321 44.2
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 1.4e-56 224.6 325 42.8
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 2.4e-56 223.8 324 44.1
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 4.1e-56 223.0 313 45.0
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 7.0e-56 222.2 305 44.9
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.5e-55 219.9 308 44.2
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 4.5e-55 219.5 337 40.9
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.1e-53 214.9 333 41.4
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 1.5e-53 214.5 331 40.2
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 1.5e-53 214.5 331 40.2
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.5e-53 213.8 343 42.6
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.2e-52 211.5 374 38.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.4e-51 208.0 356 40.7
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.1e-51 206.8 315 41.3
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 3.1e-51 206.8 222 50.5
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.9e-49 200.3 325 40.0
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 8.3e-49 198.7 238 48.3
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.1e-48 198.4 390 35.1
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 2.4e-48 197.2 314 42.7
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 4.1e-48 196.4 306 41.2
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.2e-47 194.9 299 41.5
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 7.3e-45 185.7 311 37.3
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 3.6e-44 183.3 345 38.3
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 4.7e-44 183.0 343 36.4
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.2e-42 178.3 320 37.5
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.2e-42 178.3 320 37.5
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.2e-42 178.3 320 37.5
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.5e-42 177.9 442 36.7
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 1.5e-42 177.9 296 36.8
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.7e-41 174.5 323 37.2
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.7e-41 174.5 323 37.2
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 3.7e-41 173.3 330 36.1
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 3.2e-40 170.2 238 43.7
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 4.6e-39 166.4 303 39.6
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.5e-37 160.6 345 34.2
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 4.3e-37 159.8 209 46.9
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 4.7e-36 156.4 261 39.1
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.8e-27 127.9 318 34.9
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 1.0e-22 112.1 372 28.0
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 6.2e-20 102.8 319 28.5
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.2e-18 98.6 156 39.7
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.7e-14 84.7 360 25.0
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.5e-13 80.9 338 26.0
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 3.3e-13 80.5 370 25.4
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 3.3e-13 80.5 82 53.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 8.1e-12 75.9 75 52.0
DCAR_000727 Daucus carota HOM05D005771 ORTHO05D045073 1.2e-10 72.0 57 70.2
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 2.6e-10 70.9 256 27.3
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 3.4e-10 70.5 56 57.1
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 9.9e-10 68.9 94 42.6
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 3.2e-08 63.9 169 27.2


User provided reference genes

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