Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 4.0e-70 268.1 145 100.0
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.6e-26 123.2 90 67.8
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 6.7e-25 117.9 89 71.9
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 1.5e-24 116.7 98 68.4
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 2.5e-24 115.9 101 67.3
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 9.6e-24 114.0 113 51.3
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 2.8e-23 112.5 121 54.5
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 8.2e-23 110.9 119 57.1
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 8.2e-23 110.9 99 52.5
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 8.2e-23 110.9 89 71.9
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 1.1e-22 110.5 118 56.8
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 1.1e-22 110.5 89 70.8
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 3.1e-22 109.0 124 55.6
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 3.1e-22 109.0 89 70.8
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 4.0e-22 108.6 124 55.6
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 5.3e-22 108.2 113 61.1
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 5.3e-22 108.2 96 57.3
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 5.3e-22 108.2 118 45.8
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 5.3e-22 108.2 102 53.9
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 6.9e-22 107.8 92 54.3
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 1.2e-21 107.1 83 56.6
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 1.5e-21 106.7 73 61.6
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 4.5e-21 105.1 97 50.5
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 4.5e-21 105.1 86 58.1
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 5.8e-21 104.8 87 69.0
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 1.0e-20 104.0 82 59.8
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.3e-20 103.6 87 55.2
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.3e-20 103.6 87 55.2
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 2.2e-20 102.8 122 57.4
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 2.2e-20 102.8 99 49.5
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 2.9e-20 102.4 96 50.0
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 3.8e-20 102.1 88 67.0
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 4.9e-20 101.7 106 48.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 6.5e-20 101.3 72 61.1
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 6.5e-20 101.3 148 42.6
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 6.5e-20 101.3 79 54.4
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 1.1e-19 100.5 96 62.5
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 1.1e-19 100.5 96 62.5
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 1.1e-19 100.5 95 47.4
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 1.4e-19 100.1 89 51.7
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 2.5e-19 99.4 110 49.1
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 2.5e-19 99.4 110 57.3
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 3.2e-19 99.0 82 52.4
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 4.2e-19 98.6 114 43.0
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 4.2e-19 98.6 111 47.7
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 5.5e-19 98.2 93 50.5
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 7.1e-19 97.8 117 46.2
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 7.1e-19 97.8 112 45.5
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 7.1e-19 97.8 102 58.8
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 7.1e-19 97.8 94 60.6
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 9.3e-19 97.4 106 48.1
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 4.6e-18 95.1 80 53.8
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 4.6e-18 95.1 91 64.8
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 7.9e-18 94.4 79 69.6
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 7.9e-18 94.4 73 53.4
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 1.3e-17 93.6 104 53.8
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 3.0e-17 92.4 97 45.4
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 3.9e-17 92.0 80 72.5
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 5.1e-17 91.7 76 67.1
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 8.7e-17 90.9 110 53.6
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.9e-16 89.7 79 67.1
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 7.4e-16 87.8 70 55.7
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.3e-15 87.0 67 59.7
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 1.6e-15 86.7 88 44.3
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 3.7e-15 85.5 80 45.0
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 4.8e-15 85.1 76 57.9
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 1.1e-14 84.0 107 52.3
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 1.4e-14 83.6 75 46.7
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.4e-14 83.6 67 58.2
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.0e-13 79.7 93 46.2
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 1.7e-12 76.6 127 33.9
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.2e-12 76.3 81 53.1
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 8.5e-12 74.3 61 55.7
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.1e-11 73.9 63 47.6
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 2.5e-11 72.8 72 50.0
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 4.2e-11 72.0 56 58.9
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 2.7e-10 69.3 51 58.8
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 1.0e-09 67.4 63 55.6
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 1.8e-09 66.6 72 47.2
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 2.0e-08 63.2 92 37.0
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 6.3e-07 58.2 67 44.8
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 4.1e-06 55.5 38 57.9
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 6.9e-06 54.7 65 38.5


User provided reference genes

Program Settings